Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15g05
(648 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 48 1e-06
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 48 2e-06
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 36 0.004
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 33 0.047
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 31 0.19
SPBC4C3.08 |mug136||acetylglucosaminyltransferase|Schizosaccharo... 29 0.58
SPBC32H8.06 |mug93||TPR repeat protein, meiotically spliced|Schi... 29 0.58
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 28 1.0
SPCC1322.14c |vtc4||vacuolar transporter chaperone |Schizosaccha... 28 1.3
SPCC126.14 |prp18||U5 snRNP-associated protein Prp18|Schizosacch... 28 1.3
SPAC6F12.15c |cut9|dre1|anaphase-promoting complex subunit Cut9|... 28 1.3
SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.3
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 28 1.3
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 27 1.8
SPBC8D2.05c |sfi1||spindle pole body protein Sfi1|Schizosaccharo... 27 2.3
SPCC645.12c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 27 2.3
SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|c... 27 3.1
SPBC146.09c |lsd1|swm1, saf110|histone demethylase SWIRM1|Schizo... 27 3.1
SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces ... 27 3.1
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 4.1
SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces... 26 4.1
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 26 4.1
SPAC20G4.03c |hri1||eIF2 alpha kinase Hri1|Schizosaccharomyces p... 26 4.1
SPAC22E12.18 |||conserved fungal protein|Schizosaccharomyces pom... 26 4.1
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 26 4.1
SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces p... 26 4.1
SPAP8A3.10 |||mitochondrial intermembrane space protein sorting ... 26 5.4
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 26 5.4
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 26 5.4
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 26 5.4
SPAC4H3.04c |||UPF0103 family|Schizosaccharomyces pombe|chr 1|||... 25 7.1
SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces... 25 9.4
SPAC30.02c |||RNA polymerase II elongator complex subunit|Schizo... 25 9.4
SPAC140.03 |arb1||argonaute binding protein 1|Schizosaccharomyce... 25 9.4
SPAC8F11.03 |msh3|swi4|MutS protein homolog 3|Schizosaccharomyce... 25 9.4
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 48.0 bits (109), Expect = 1e-06
Identities = 23/70 (32%), Positives = 39/70 (55%)
Frame = +1
Query: 373 IRREKADTFKTQAVKAFRRGEYERALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVV 552
+ +E+A+ K + A +Y++AL Y +AIE +P++Y +RA +LG FE V
Sbjct: 78 VNKEEAEKLKLEGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAV 137
Query: 553 GDCDSALRLN 582
D + L L+
Sbjct: 138 EDALTCLSLD 147
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 47.6 bits (108), Expect = 2e-06
Identities = 38/146 (26%), Positives = 68/146 (46%)
Frame = +1
Query: 166 KADAAQVLADKYLQGKVILDEEVTMNIKDDRTVINKKTRKTCDDSSEIDKETWMAEVSKD 345
K +AA+V+ ++ L+ + T KK +K D + +++ +
Sbjct: 79 KNEAAKVVKEEDLKSSETGKDVETAAAAAAAAKKKKKNKKKVKAKKVGDSS--VDKIATE 136
Query: 346 AERRALDRKIRREKADTFKTQAVKAFRRGEYERALSCYDRAIEQIKDNPMFYCDRALTNI 525
+++ ++ R + A KT KA+ + EY A+ Y +AI D P+F+ +RA
Sbjct: 137 ESVKSMTKEERAKLAAELKTLGNKAYGQKEYANAIDYYTQAITCSHD-PIFFSNRAACYA 195
Query: 526 KLGHFEKVVGDCDSALRLNEDSYXSA 603
+G FE+V+ D AL L + SY A
Sbjct: 196 AIGDFEQVIKDTSEALSL-DSSYVKA 220
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 36.3 bits (80), Expect = 0.004
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +1
Query: 355 RALDRKIRREKADTFKTQAVKAFRRGEYERALSCYDRAIEQIKDN----PMFYCDRALTN 522
+ L +++R K + K Q FR+G Y+ A Y A++ DN Y +RA
Sbjct: 214 KTLFKQVR--KLENTKNQGNDLFRQGNYQDAYEKYSEALQIDPDNKETVAKLYMNRATVL 271
Query: 523 IKLGHFEKVVGDCDSALRLNEDSY 594
++L E+ + D D+AL + + SY
Sbjct: 272 LRLKRPEEALSDSDNALAI-DSSY 294
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 2386
Score = 32.7 bits (71), Expect = 0.047
Identities = 20/78 (25%), Positives = 41/78 (52%)
Frame = +1
Query: 394 TFKTQAVKAFRRGEYERALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVVGDCDSAL 573
+F Q + G ++ ALSCY+ I++ +N + ++ GH+E +V DS +
Sbjct: 1449 SFDQQLLLHENSGTWDSALSCYEIIIQKDPENKKAKIGLLNSMLQSGHYESLVLSLDSFI 1508
Query: 574 RLNEDSYXSASLPNKGLQ 627
+N D++ + + N G++
Sbjct: 1509 -IN-DNHEYSKMLNLGIE 1524
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 30.7 bits (66), Expect = 0.19
Identities = 12/50 (24%), Positives = 25/50 (50%)
Frame = +1
Query: 433 EYERALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVVGDCDSALRLN 582
+Y +A Y +A+ + NP F+C + ++ ++ + A+RLN
Sbjct: 599 KYNKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQYQDALDAYSRAIRLN 648
>SPBC4C3.08 |mug136||acetylglucosaminyltransferase|Schizosaccharomyc
es pombe|chr 2|||Manual
Length = 372
Score = 29.1 bits (62), Expect = 0.58
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -1
Query: 495 HWVVFNLFDSTIVTTESSFVLSPPKSFYRLRFERICFLSSDL 370
H VV ++ D ++ + S + + + F ++RICFL SD+
Sbjct: 137 HEVVDDVNDIALLDSRWSMMFTKLRVFEMYEYDRICFLDSDI 178
>SPBC32H8.06 |mug93||TPR repeat protein, meiotically
spliced|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 29.1 bits (62), Expect = 0.58
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 433 EYERALSCYDRAIEQI-KDNPM--FYCDRALTNIKLGHFEKVVGDCDSALRLN 582
E R + +D + I +N + Y D +LT+++ + KVV DC AL +N
Sbjct: 19 ENTREIDVFDEFLNAIGNENTITPVYADSSLTHLRKKSYTKVVHDCTYALVIN 71
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 28.3 bits (60), Expect = 1.0
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Frame = -2
Query: 326 IHVSLSISLESSQVF-LVFLLITVLSSLIFM---VTSSSSITFPCRYLSAKTWAASAFSL 159
I +S S+S SS V L++ SSLI V SSSS P T++AS ++
Sbjct: 657 IPISSSLSTYSSSVIPSSSTLVSSSSSLIVSSSPVASSSSSPIPSSSSLVSTYSASLSNI 716
Query: 158 SPLAMSLTKFDTS 120
+ ++SLT +S
Sbjct: 717 THSSLSLTAMSSS 729
>SPCC1322.14c |vtc4||vacuolar transporter chaperone
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 27.9 bits (59), Expect = 1.3
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Frame = +1
Query: 151 SGDKEKADAAQVLADK-----YLQGKVILDEEVTMNIKDDRTVINKKTRKTCDDSSEIDK 315
SG + +A VL D + G +DEE + R + T +T D E+D+
Sbjct: 495 SGTHSSSVSANVLTDSENTPIHADGDNYVDEESRIGSSSTRN--DNSTFQTSDSFQELDE 552
Query: 316 ETWMAEVSK----DAERRALDRKIRREKADTFKTQAVKAF 423
T + ++SK D+ AL+ +++ K D+F + V F
Sbjct: 553 RTNLLDISKRKGRDSFVAALNSRLKDIK-DSFFLETVPKF 591
>SPCC126.14 |prp18||U5 snRNP-associated protein
Prp18|Schizosaccharomyces pombe|chr 3|||Manual
Length = 343
Score = 27.9 bits (59), Expect = 1.3
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +1
Query: 343 DAERRALDRKIRREKADTFKTQAVKAFRRGEYERALSCYDRAIEQIKDNPMFYCDRALTN 522
D + ++RK RR+ T + KAFRRG++E+ +Q KD R L
Sbjct: 2 DFLKEEIERK-RRQLEGTSELPVKKAFRRGDWEKEREKKYLQEKQQKDEQRELKKRKLEE 60
Query: 523 IKLGHFEK 546
+L + EK
Sbjct: 61 ERLKYEEK 68
>SPAC6F12.15c |cut9|dre1|anaphase-promoting complex subunit
Cut9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 671
Score = 27.9 bits (59), Expect = 1.3
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +1
Query: 400 KTQAVKAFRRGEYERALSCYDRAIEQIKDNPMF--YCDRALTNIKLGHFEKVVGDCDSAL 573
K +A + RG+ LS +DRA E K+ M C A + H + D L
Sbjct: 197 KLEASMCYLRGQVYTNLSNFDRAKECYKEALMVDAKCYEAFDQLVSNHLLTADEEWDLVL 256
Query: 574 RLNEDSY 594
+LN +Y
Sbjct: 257 KLNYSTY 263
>SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 390
Score = 27.9 bits (59), Expect = 1.3
Identities = 22/97 (22%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = +1
Query: 157 DKEKADAAQVLADKY-LQGKVILDEEVTMNIKDDRTVINKKTRKTCDDSSE---IDKETW 324
+ E A++ ++ + L+GK+ EE+T +++ +N+K +CD S I+ +
Sbjct: 41 ESELEKVAKLKSESFSLKGKITQKEELTYRLQNLAASLNEKKSLSCDLHSRKQLIEDDLS 100
Query: 325 MAEVSKDAERRALDRKIRREKADTFKTQAVKAFRRGE 435
+ S + + L + +D F + + A+RR E
Sbjct: 101 NRKKSINIASQKL-AGLSHSTSDYFSKEYLTAYRRSE 136
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 27.9 bits (59), Expect = 1.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 227 SSSITFPCRYLSAKTWAASAFSLSPLAMSLTKFDTS 120
S +I+ R LS+ TWA+ LS S+T FD +
Sbjct: 1973 SEAISLLERLLSSGTWASLGMKLSFFTKSITHFDAT 2008
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.5 bits (58), Expect = 1.8
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 9/116 (7%)
Frame = +1
Query: 226 EEVTMNIKDDRTVINKKTRKTCDDSSEIDKETWMAE--VSKDAERRALDRKIRREKADTF 399
+E+ ++++ ++ +K E D+E E + ++ E+R L+ + RREK D
Sbjct: 655 QELERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLREEEEKRILEERKRREKLD-- 712
Query: 400 KTQAVKAFRRGEYERALSCYDRAIEQIKDNPMFY-------CDRALTNIKLGHFEK 546
+ + RR E+ +R + + K F D T+ +LG FEK
Sbjct: 713 -KEEEERRRRELLEKESEEKERRLREAKIAAFFAPNQTKEGSDGCTTSSQLGLFEK 767
>SPBC8D2.05c |sfi1||spindle pole body protein
Sfi1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 840
Score = 27.1 bits (57), Expect = 2.3
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 73 KMELNEEWNNFMKRIG 120
K+ N+EW N M+RIG
Sbjct: 80 KLSWNDEWRNLMRRIG 95
>SPCC645.12c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 198
Score = 27.1 bits (57), Expect = 2.3
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 70 NKMELNEEWNNFMKRIGDVSNLVRDMASGDKEKADAAQVLADKYLQGKVILDEEVTMNIK 249
NK + EEWN+F IG ++ + A + Q+LA+K + + I D ++ +
Sbjct: 86 NKELIEEEWNDFQNEIG----IIEENAVEQEITLQQQQLLAEKDEENE-IADNDLEPEVY 140
Query: 250 D 252
D
Sbjct: 141 D 141
>SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 355
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +1
Query: 271 KKTRKTCDDSSEIDKETWMAEVSKDAERRALDRKIRREKADTFKTQAVKAFRRGEYERAL 450
KK DD++E + + ++ ++ DRK EK+ T T +K F +R
Sbjct: 123 KKNELEGDDATEKFVTSSYKKHREEVQKAIEDRKEEDEKSITDTTTGMKDFYASMLDRQE 182
Query: 451 SCYDRAIEQIKDN 489
+ A+E ++++
Sbjct: 183 KIHQAAVEGVQNS 195
>SPBC146.09c |lsd1|swm1, saf110|histone demethylase
SWIRM1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1000
Score = 26.6 bits (56), Expect = 3.1
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 KTRKTCDDSSEIDKETWMAEVSKDAERRALDRKIRREKADTFKTQAVK-AFRRGEYERAL 450
K R T D + K A++ K RALD ++ D + + R EY+R +
Sbjct: 867 KQRVTGDPEARATKNEIRAKLGKTW--RALDSLGKQPWVDEINARRANYSTRLEEYQRQI 924
Query: 451 SCYDRAIEQIKDNPMFYCD 507
+ Y+ + QIK C+
Sbjct: 925 NSYNVRVAQIKSEHQRRCE 943
>SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 550
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +1
Query: 196 KYLQGKVILDEEVTMNIKDDRTVINKKTRKTCDDSSEIDKET 321
KYL G I ++ + +K + I+KK + +D +++ K+T
Sbjct: 117 KYLGGNRIKVDDSSPKLKQNSNNISKKQNSSRNDDTKVKKDT 158
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.2 bits (55), Expect = 4.1
Identities = 26/137 (18%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Frame = +1
Query: 31 LNKILSNPALKDHNKMEL--NEEWNNFMKRIGDVSNLV-RDMASGDKEKADAAQVLADKY 201
L+ L+ + N+ +L E+ +N + S+LV ++ + E D + ++
Sbjct: 3995 LSNSLNEKLWDEPNEEDLLETEQKSNEQSAANNESDLVSKEDDNKALEDKDRQEKEDEEE 4054
Query: 202 LQGKVILDEEVTMNIKDDRTVINKKTRKTCDDSSEIDKETWMAEVSKDAERRALDRKI-- 375
+ V +D+E+ +I+++ + + D ++ + +VSKD++ +D +
Sbjct: 4055 MSDDVGIDDEIQPDIQENNSQPPPENEDHLDLPEDLKLDEKEGDVSKDSDLEDMDMEAAD 4114
Query: 376 -RREKADTFKTQAVKAF 423
+E+AD K + ++ F
Sbjct: 4115 ENKEEADAEKDEPMQDF 4131
>SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1155
Score = 26.2 bits (55), Expect = 4.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 517 TNIKLGHFEKVVGDCDSALRLNEDS 591
+N+ + HF V G+ DS LN DS
Sbjct: 160 SNVTIEHFYNVKGNVDSLFFLNNDS 184
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 67 HNKMELNEEW-NNFMKRIGDVSNLVRDMASGDKEKADAAQVLADKYLQGK 213
H+ ++ + W NN K + D+ ++ +S +KE A L++KY + K
Sbjct: 13 HDDFKVVDSWINNGAKWLEDIQLYYKERSSIEKEYAQKLASLSNKYGEKK 62
>SPAC20G4.03c |hri1||eIF2 alpha kinase Hri1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = +1
Query: 97 NNFMKRIGDVSNLVRDMASGDKEKADAAQVLADKYLQGKVILDEEVTMNIKDD 255
++F+ + + ++L+R M S ++ AAQ+L V+ + V + +D
Sbjct: 628 HDFLDSMPEEASLIRSMLSSSNKRPTAAQLLTSNLFHDLVVNELHVYQALLED 680
>SPAC22E12.18 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 336
Score = 26.2 bits (55), Expect = 4.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 88 EEWNNFMKRIGDVSNLVRDMASGDKEKAD 174
EEW+NF+ + D + + D GD D
Sbjct: 177 EEWDNFVSMLEDARSDLEDYKEGDDSNWD 205
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 445 ALSCYDRAIEQIKDNPMFYCDRALTNIKLGHFEKVVGDCDSALRLNEDSYXS 600
A+S Y+RA+ + A++NI LG+FE +A+ + ++S S
Sbjct: 491 AVSSYNRAVSLQPQYVRVRSNMAVSNINLGYFEDAAKHLLAAIDIIQNSSTS 542
>SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 584
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +1
Query: 250 DDRTVINKKTRKTCDDSSEIDKETWMAEVSKDAERRALDRKIRREKADTFKTQAVKAFR 426
D R +NKK +K I+K W + + RR RK +E+A + Q+ A R
Sbjct: 187 DLRCRVNKKAKKLFGSEPSIEKTNW---IEAEFTRRHTKRK-EKERACLSQNQSSNASR 241
>SPAP8A3.10 |||mitochondrial intermembrane space protein sorting
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 171
Score = 25.8 bits (54), Expect = 5.4
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 349 ERRALDRKIRREKADTFKTQAVKAFRRGEYERALSCYDRAIEQIKD 486
ER +D + K++TF VK R EY R + + + I D
Sbjct: 79 ERSVIDPSKQELKSETFNLDHVKILRVIEYSRFIQSSENCSKTIVD 124
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.8 bits (54), Expect = 5.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 313 KETWMAEVSKDAERRALDRKIRRE 384
+E W+ + SK A RRA K+R E
Sbjct: 469 QEQWLKDKSKKARRRAEREKLRSE 492
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 25.8 bits (54), Expect = 5.4
Identities = 19/112 (16%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Frame = +1
Query: 61 KDHNKMELNEEWNNFMKRIGDVSNLVRDMASGDKEKADAAQVLADKY--LQGKVILDEEV 234
+++ K + ++ I + ++L+ ++ L +K L+ +++EV
Sbjct: 121 RENLKHQFEDQIEKLNSEISNQNSLILQKKDELEKSIQRCSELEEKINSLESAQSIEQEV 180
Query: 235 TMNIKDDRTVINKKTRKTCDDSSEIDKETWMAEVSKDAERRALDRKIRREKA 390
++KDD+TV +T+ + S +T + +++ +RK +++K+
Sbjct: 181 ISSLKDDKTV---ETKNDVPEVSRPSTDTIGVSSALSKKKKKRNRKNQKKKS 229
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 25.8 bits (54), Expect = 5.4
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 31 LNKILSNPALKDHNKMELNEEWNNFMKRIGDVSNLVRDMAS 153
++ + + + KDH + L EE M+ I D+S + + S
Sbjct: 222 IHDLKESDSFKDHEILRLKEERTAAMQAIDDISGTIETIKS 262
>SPAC4H3.04c |||UPF0103 family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 309
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 387 FLSSDLAVESSSLCVLTDFCH 325
FLS + ES+S + +DFCH
Sbjct: 172 FLSQYIKDESNSFVISSDFCH 192
>SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 490
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 424 RRGEYERALSCYDRAIEQIKDNPM 495
+RG Y+RAL YD A + N M
Sbjct: 188 KRGAYDRALGFYDLAHRTLPGNGM 211
>SPAC30.02c |||RNA polymerase II elongator complex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 281
Score = 25.0 bits (52), Expect = 9.4
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 8/91 (8%)
Frame = +1
Query: 211 KVILDEEVTMNI---KDDRTVINKKTRKTCDDSSEIDKETWMAEVSKDAERRALDRKIRR 381
K L++ + NI KD R +I D+S I+KET+ ++ A R L ++R
Sbjct: 22 KKALEDRIHQNIDNTKDYRVIIIN------DESLNIEKETYRESKNEKAARGLLYSAVQR 75
Query: 382 E-KADTF----KTQAVKAFRRGEYERALSCY 459
E TF +K FR Y + S Y
Sbjct: 76 ELSKSTFVICDALNYIKGFRYQLYCESKSMY 106
>SPAC140.03 |arb1||argonaute binding protein 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 399
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 181 QVLADKYLQGKVILDEEVTMNIKDDRTVINKKTRKTC 291
+ L +YL GKV+ E +T+ + +T++N + C
Sbjct: 292 RTLGPRYLTGKVVEQEYLTVKLV-SKTLLNFSNQSLC 327
>SPAC8F11.03 |msh3|swi4|MutS protein homolog 3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1004
Score = 25.0 bits (52), Expect = 9.4
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = +1
Query: 22 KMALNKILSNPALKDHNKMELNEEWNNFMKRIGDVSNLVRDMASGDKEKADAAQVLADKY 201
++AL+ I++ K L +++ + R+G NL +M++ E + +VL+
Sbjct: 782 QLALSAIMAQSGCFVPAKSALLPIFDSILIRMGSSDNLSVNMSTFMVEMLETKEVLSKAT 841
Query: 202 LQGKVILDE 228
+ VI+DE
Sbjct: 842 EKSMVIIDE 850
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,414,990
Number of Sequences: 5004
Number of extensions: 45294
Number of successful extensions: 198
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -