Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15f23
         (315 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0677 - 24202037-24202444,24202499-24202795,24202960-242030...    29   0.77 
10_05_0047 + 8524345-8524414,8524687-8524776,8525004-8525306,852...    26   5.4  
06_03_1377 - 29692895-29692899,29700435-29702190                       26   5.4  
12_02_1224 + 27158810-27161366,27161593-27161969                       26   7.1  
01_01_0384 - 2970369-2970726,2970812-2970882,2971428-2971509,297...    26   7.1  
12_01_0696 + 5936869-5937068,5937705-5938179,5938240-5938665           25   9.4  
11_06_0521 + 24544254-24544964                                         25   9.4  

>01_05_0677 -
           24202037-24202444,24202499-24202795,24202960-24203009,
           24204534-24204589,24205751-24206040,24206100-24206488,
           24210578-24210818
          Length = 576

 Score = 29.1 bits (62), Expect = 0.77
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 155 DITALXTHDGF*EDLAKENKDIEECFRDTN 244
           D++ +  ++   E +AK NK +E CF+D N
Sbjct: 12  DVSLVVENNELKEQVAKLNKSLERCFKDKN 41


>10_05_0047 +
           8524345-8524414,8524687-8524776,8525004-8525306,
           8525413-8525872,8525962-8526043,8526157-8526351
          Length = 399

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 3   INKCRKILTMTAEEKKLNRRKTIRRIAEKI 92
           INK      +TAEEK+ +  + +R  AE+I
Sbjct: 357 INKVAAASRLTAEEKRRSAERKVREKAERI 386


>06_03_1377 - 29692895-29692899,29700435-29702190
          Length = 586

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 155 DITALXTHDGF*EDLAKENKDIEECFRDTN 244
           D + +  ++   E LAK NK +E CF+  N
Sbjct: 517 DASLIVENNELKEQLAKLNKSLERCFKGKN 546


>12_02_1224 + 27158810-27161366,27161593-27161969
          Length = 977

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -2

Query: 233 GNIPQYLCSLLPNLL 189
           G IP+ LC+LLPN L
Sbjct: 528 GEIPEALCTLLPNSL 542


>01_01_0384 -
           2970369-2970726,2970812-2970882,2971428-2971509,
           2971757-2971818,2972308-2972401,2972502-2972569,
           2972681-2972747,2972830-2972960,2973093-2973200,
           2973577-2973642,2973706-2973774,2973990-2974115,
           2974167-2974284,2974741-2974847,2975889-2976009,
           2976162-2976235,2976955-2977051,2977564-2977679,
           2978218-2978313,2978426-2978635,2979101-2979253
          Length = 797

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 187 LRRFGKREQRY*GMFPRY 240
           LRR G+   RY G+ PRY
Sbjct: 619 LRRLGRHGTRYQGLIPRY 636


>12_01_0696 + 5936869-5937068,5937705-5938179,5938240-5938665
          Length = 366

 Score = 25.4 bits (53), Expect = 9.4
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +3

Query: 36  AEEKKLNRRKTIRRIAEKI 92
           AEEKKLN R  +RR  +KI
Sbjct: 46  AEEKKLNERLGMRRNEDKI 64


>11_06_0521 + 24544254-24544964
          Length = 236

 Score = 25.4 bits (53), Expect = 9.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 3  INKCRKILTMTAEEKKLNRRKTI 71
          I  C ++LT  A+   +NR+KTI
Sbjct: 9  IGMCDRLLTFLAKNLSMNRQKTI 31


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,226,547
Number of Sequences: 37544
Number of extensions: 89442
Number of successful extensions: 227
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 386885760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)