Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15f23
         (315 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   0.87 
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              23   1.2  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   2.0  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   2.0  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    21   3.5  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      20   8.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   8.1  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 0.87
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 89  FLGYSTNGFSPIEFLLF 39
           +LGYS + F+PI + +F
Sbjct: 312 WLGYSNSAFNPIIYSIF 328


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 3  INKCRKILTMTAEEKKLNRRK 65
          INK RKI ++ AEE  ++ +K
Sbjct: 23 INKLRKIESVCAEENGIDLKK 43


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 257 LGILIIWGLYSTDG 298
           L +L +WG Y+T+G
Sbjct: 188 LPLLKVWGRYTTEG 201


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 257 LGILIIWGLYSTDG 298
           L +L +WG Y+T+G
Sbjct: 188 LPLLKVWGRYTTEG 201


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 210 TKILRNVSEILTDAVIWAS 266
           T ILR + E+  DA  W S
Sbjct: 324 TSILRYLQELHVDAPTWIS 342


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -1

Query: 294 SVEYKPQII 268
           SVEYKP+I+
Sbjct: 169 SVEYKPEIM 177


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 131 ER*RYSCK*TSVHYFLGYSTNGFSP 57
           ER    C  TSVHY  G + +   P
Sbjct: 359 ERTPSKCSQTSVHYSNGQTHSQLCP 383


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,592
Number of Sequences: 438
Number of extensions: 1353
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6719922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)