Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15f22
         (537 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81564-4|CAB04574.1|  432|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z70205-10|CAA94122.2|  887|Caenorhabditis elegans Hypothetical p...    27   8.6  
Z68003-5|CAA91979.2|  887|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U29097-1|AAA68411.1| 1490|Caenorhabditis elegans Hypothetical pr...    27   8.6  
L07144-9|AAK21441.1|  737|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z81564-4|CAB04574.1|  432|Caenorhabditis elegans Hypothetical
           protein K05C4.4 protein.
          Length = 432

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
 Frame = +3

Query: 18  FDEKNIA*KLRRCECNYVCLSLHADKHSVRITLSAYRSSQITQ---KVQEVLVL-II*AN 185
           F EKN+A  + +     +  S+  DK+ ++    A   +++ Q    VQ++ VL +I  N
Sbjct: 240 FSEKNLAETILKLGFKTITESVIVDKNELKFETLASEIAEVGQYVSTVQDMSVLDVITVN 299

Query: 186 VLQSVGPRVSRISSVCLH 239
            L  V P    +S  C +
Sbjct: 300 RLLEVRPDTLDVSGFCFN 317


>Z70205-10|CAA94122.2|  887|Caenorhabditis elegans Hypothetical
           protein E02H4.3a protein.
          Length = 887

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +2

Query: 245 RTLNRVRPPFSARCGLGNVSCRAARAVTATDMKQGPALVQSPAP 376
           +T+N V   FS + G GN +     A T T  K+ PA  Q P P
Sbjct: 430 KTVNAVAAAFSTQAGSGNATTVDDPASTTTS-KENPA-AQPPKP 471


>Z68003-5|CAA91979.2|  887|Caenorhabditis elegans Hypothetical
           protein E02H4.3a protein.
          Length = 887

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +2

Query: 245 RTLNRVRPPFSARCGLGNVSCRAARAVTATDMKQGPALVQSPAP 376
           +T+N V   FS + G GN +     A T T  K+ PA  Q P P
Sbjct: 430 KTVNAVAAAFSTQAGSGNATTVDDPASTTTS-KENPA-AQPPKP 471


>U29097-1|AAA68411.1| 1490|Caenorhabditis elegans Hypothetical
           protein F18C5.3 protein.
          Length = 1490

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +2

Query: 287 GLGNVSCRAARAVTATDMKQGPALVQSPAPVPLVLAEC*PVYTEHAVQRA 436
           G     C  A+   A +M Q    + SPA + +VLA    V  EH   +A
Sbjct: 733 GAVKAECPEAKGNRAPEMMQHLGRIVSPAGIQMVLAPFRDVVNEHPSAKA 782


>L07144-9|AAK21441.1|  737|Caenorhabditis elegans Hypothetical
           protein R05D3.2 protein.
          Length = 737

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 256 QSSASILREVWTGKCQLSCCESRDGNGHE 342
           Q +AS+ R++W   CQL C   R+ +  E
Sbjct: 697 QLTASMRRQIWKWICQLRCGIRRESDADE 725


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,817,015
Number of Sequences: 27780
Number of extensions: 269695
Number of successful extensions: 631
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)