BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15f08
(629 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. 25 2.6
AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger transc... 24 4.6
AY659931-1|AAT51799.1| 167|Anopheles gambiae lysozyme i-1 protein. 23 6.1
AY280612-1|AAQ21365.1| 309|Anopheles gambiae carbonic anhydrase... 23 6.1
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 23 6.1
AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative acetyltr... 23 8.0
>DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein.
Length = 847
Score = 24.6 bits (51), Expect = 2.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 527 IPLPPKIDPTVTMMQVEE 580
IP PPK PTVTMM +++
Sbjct: 754 IPPPPK-PPTVTMMDMQQ 770
>AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger
transcription factor pannier protein.
Length = 537
Score = 23.8 bits (49), Expect = 4.6
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -1
Query: 119 YHLSLCA-YHSLNGQAFLIFIPTKRLILQ 36
Y + C YH +NG + P+KRL+ Q
Sbjct: 139 YLCNACGLYHKMNGMNRPLIKPSKRLVSQ 167
>AY659931-1|AAT51799.1| 167|Anopheles gambiae lysozyme i-1 protein.
Length = 167
Score = 23.4 bits (48), Expect = 6.1
Identities = 7/24 (29%), Positives = 12/24 (50%)
Frame = -2
Query: 472 SGCDGVL*IDNKLCKLLHVNYVFW 401
SGCD L +C + + + +W
Sbjct: 50 SGCDASLRCSGDVCGMFAITWAYW 73
>AY280612-1|AAQ21365.1| 309|Anopheles gambiae carbonic anhydrase
protein.
Length = 309
Score = 23.4 bits (48), Expect = 6.1
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -2
Query: 598 VCYIRFLLDLHHGDRWIY 545
+CY F+L GD W Y
Sbjct: 8 LCYALFVLHAARGDEWNY 25
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 23.4 bits (48), Expect = 6.1
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -3
Query: 534 RGMWIWYLLRSTPTLMPSSISVGATESCKSTTNFAN 427
RG W ++ ++ PT PS ++G + + T A+
Sbjct: 1131 RGQWPSWMKQNLPTFRPSGPAMGPRTAMAAGTRRAH 1166
>AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative
acetyltransferase protein.
Length = 471
Score = 23.0 bits (47), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 575 EEKPDVTYSDVGGCKEQI 628
EE+ D TY D CK++I
Sbjct: 208 EEEDDDTYQDYYSCKKRI 225
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,786
Number of Sequences: 2352
Number of extensions: 11618
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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