Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15f08
(629 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 262 1e-70
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 64 8e-11
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 61 7e-10
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 61 7e-10
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 56 2e-08
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 56 2e-08
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 55 5e-08
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 44 1e-04
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 41 8e-04
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z93386-1|CAB07645.1| 442|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 29 3.6
U97008-6|AAB52307.1| 323|Caenorhabditis elegans Serpentine rece... 29 3.6
U97549-5|AAO91739.1| 212|Caenorhabditis elegans Dopamine recept... 28 6.3
U97549-4|AAO91736.1| 460|Caenorhabditis elegans Dopamine recept... 28 6.3
U97549-3|AAO91737.1| 402|Caenorhabditis elegans Dopamine recept... 28 6.3
U97549-2|AAO91738.1| 399|Caenorhabditis elegans Dopamine recept... 28 6.3
U50300-1|AAC48108.2| 349|Caenorhabditis elegans Serpentine rece... 28 6.3
U39998-5|AAK71421.2| 408|Caenorhabditis elegans Gustatory recep... 28 6.3
AL132949-10|CAB61082.1| 721|Caenorhabditis elegans Hypothetical... 28 6.3
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 262 bits (642), Expect = 1e-70
Identities = 125/186 (67%), Positives = 144/186 (77%), Gaps = 1/186 (0%)
Frame = +2
Query: 74 MPDHLGNDMRXXXXXXXXXXXXXX-SLDEGDIALLKSYGQGQYTKIIKEVEEGIQTVMKR 250
MPDHLG+DMR +LDEGDIA+LK YGQG Y + +K ++ I+ +K+
Sbjct: 1 MPDHLGDDMRKTKKDDTKEEEKNFQALDEGDIAVLKRYGQGPYAEQLKTLDADIENCLKK 60
Query: 251 VNELTGIKESDTGXXXXXXXXXXXXKQTLQNEQPLQVARCTKIINADSNDPKYIINVKQF 430
VNEL+G+KESDTG KQ +Q EQPLQVARCTKII +D +DP+Y+INVKQF
Sbjct: 61 VNELSGVKESDTGLAPPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINVKQF 120
Query: 431 AKFVVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVG 610
AKFVVDL DSVAPTDIEEGMRVGVDRNKYQIH+PLP KIDPTVTMMQVEEKPDVTYSDVG
Sbjct: 121 AKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVG 180
Query: 611 GCKEQI 628
GCK+QI
Sbjct: 181 GCKDQI 186
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 64.1 bits (149), Expect = 8e-11
Identities = 30/75 (40%), Positives = 44/75 (58%)
Frame = +2
Query: 404 KYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 583
K ++ V K+VVD+ S+ + G RV + + Y +H LP K+DP V++M VE+
Sbjct: 94 KVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNKVDPLVSLMMVEKV 153
Query: 584 PDVTYSDVGGCKEQI 628
PD TY VGG +QI
Sbjct: 154 PDSTYEMVGGLDKQI 168
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 60.9 bits (141), Expect = 7e-10
Identities = 30/75 (40%), Positives = 43/75 (57%)
Frame = +2
Query: 404 KYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 583
K ++ K++VD+ SV + + G RV + + Y IH LP K+DP V++M VE+
Sbjct: 89 KVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKV 148
Query: 584 PDVTYSDVGGCKEQI 628
PD TY VGG QI
Sbjct: 149 PDSTYEMVGGLDTQI 163
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 60.9 bits (141), Expect = 7e-10
Identities = 30/75 (40%), Positives = 43/75 (57%)
Frame = +2
Query: 404 KYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 583
K ++ K++VD+ SV + + G RV + + Y IH LP K+DP V++M VE+
Sbjct: 110 KVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKV 169
Query: 584 PDVTYSDVGGCKEQI 628
PD TY VGG QI
Sbjct: 170 PDSTYEMVGGLDTQI 184
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = +2
Query: 395 NDPKYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQV 574
++ K+I+ ++VV + S+ ++++G RV +D I LP ++DP V M
Sbjct: 74 SEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSH 133
Query: 575 EEKPDVTYSDVGGCKEQI 628
E+ +++YSDVGG EQI
Sbjct: 134 EDPGNISYSDVGGLAEQI 151
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = +2
Query: 395 NDPKYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQV 574
++ K+I+ ++VV + S+ ++++G RV +D I LP ++DP V M
Sbjct: 82 SEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSH 141
Query: 575 EEKPDVTYSDVGGCKEQI 628
E+ +++YSDVGG EQI
Sbjct: 142 EDPGNISYSDVGGLAEQI 159
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 54.8 bits (126), Expect = 5e-08
Identities = 26/73 (35%), Positives = 42/73 (57%)
Frame = +2
Query: 410 IINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPD 589
+I A + + + V P +++ G VGV+++ Y I LP + D V M+V+E+P
Sbjct: 114 VIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPT 173
Query: 590 VTYSDVGGCKEQI 628
YSD+GGC +QI
Sbjct: 174 EQYSDIGGCDKQI 186
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/93 (27%), Positives = 47/93 (50%)
Frame = +2
Query: 350 PLQVARCTKIINADSNDPKYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYQIHI 529
P+ V +II+ D I++ ++ V++ V +E G V ++ + +
Sbjct: 109 PMAVGSLEEIID----DQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIG 164
Query: 530 PLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQI 628
L DP V++M++E+ P TY+DVGG +QI
Sbjct: 165 VLSDDTDPMVSVMKLEKAPQETYADVGGLDQQI 197
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 40.7 bits (91), Expect = 8e-04
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +2
Query: 476 IEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQ 625
++ G V + + + LPP+ D ++ M++ +EKPD++Y D+GG Q
Sbjct: 120 LKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQ 169
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 533 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQI 628
L KID +VE+ P T+ D+GGC+ QI
Sbjct: 161 LDDKIDSNAMGHKVEKTPKETFDDIGGCESQI 192
>Z93386-1|CAB07645.1| 442|Caenorhabditis elegans Hypothetical
protein R11H6.2 protein.
Length = 442
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = -3
Query: 402 GSFESALMIFVHRATCSGCSFCSVCLSAARSHKAGGANPVSDSLMPVSSLTLFITV*IP 226
G+ +A A C G S CS+C SA K + +LM +S+ + + + +P
Sbjct: 2 GALLAAPFCAASAACCFGSSACSLCCSACPGAKNSTTTRIMYALMLISATFMAVVMLLP 60
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = +2
Query: 440 VVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGG 613
++DL+D ++ + V ++ ++ + K P+ V E P+ T+SD+GG
Sbjct: 434 LIDLEDDTIDAEVLNSLAVTMENFRFAMG-----KSSPSALREAVVETPNTTWSDIGG 486
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = +2
Query: 440 VVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGG 613
++DL+D ++ + V ++ ++ + K P+ V E P+ T+SD+GG
Sbjct: 434 LIDLEDDTIDAEVLNSLAVTMENFRFAMG-----KSSPSALREAVVETPNTTWSDIGG 486
>U97008-6|AAB52307.1| 323|Caenorhabditis elegans Serpentine
receptor, class h protein275 protein.
Length = 323
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -3
Query: 453 CKSTTNFANCFTLIMYFGSFESALMIFVHRATCSGC--SFCS 334
C+S N CF +I G F + +M+++H C FCS
Sbjct: 268 CQSANNL--CFIIIAAHGLFSTFIMLYIHSPYREACFRIFCS 307
>U97549-5|AAO91739.1| 212|Caenorhabditis elegans Dopamine receptor
protein 1, isoformd protein.
Length = 212
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 520 DPHTPASENRSN 555
DPHTPA+ NRSN
Sbjct: 60 DPHTPAAHNRSN 71
>U97549-4|AAO91736.1| 460|Caenorhabditis elegans Dopamine receptor
protein 1, isoforma protein.
Length = 460
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 520 DPHTPASENRSN 555
DPHTPA+ NRSN
Sbjct: 308 DPHTPAAHNRSN 319
>U97549-3|AAO91737.1| 402|Caenorhabditis elegans Dopamine receptor
protein 1, isoformb protein.
Length = 402
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 520 DPHTPASENRSN 555
DPHTPA+ NRSN
Sbjct: 250 DPHTPAAHNRSN 261
>U97549-2|AAO91738.1| 399|Caenorhabditis elegans Dopamine receptor
protein 1, isoformc protein.
Length = 399
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 520 DPHTPASENRSN 555
DPHTPA+ NRSN
Sbjct: 250 DPHTPAAHNRSN 261
>U50300-1|AAC48108.2| 349|Caenorhabditis elegans Serpentine
receptor, class x protein3 protein.
Length = 349
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -3
Query: 498 PTLMPSSISVGATESCKSTTNFANCFTLIMYFGSFESALM 379
PT++ SS V + K T F + F YF +F +M
Sbjct: 67 PTIITSSFLVSTEKKSKWTLVFGSAFLFFWYFETFTQIVM 106
>U39998-5|AAK71421.2| 408|Caenorhabditis elegans Gustatory receptor
family protein 5 protein.
Length = 408
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = -3
Query: 423 FTLIM---YFGSFESALMIFVHRATCSGCSFCSVCLSAARSHK 304
FTL+M + SF L+ C+ C+FCSV ++ AR H+
Sbjct: 284 FTLMMLNQHLSSFTDFLICMPFILFCT-CAFCSVTIAPARVHE 325
>AL132949-10|CAB61082.1| 721|Caenorhabditis elegans Hypothetical
protein Y53F4B.12 protein.
Length = 721
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 131 PALLYHLSLCAYHSLNGQAFLIFIPTKRLI 42
PA Y LS+C+ +L+G F+P R+I
Sbjct: 304 PAAKYMLSVCSVCALSGGVLASFLPATRVI 333
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,614,835
Number of Sequences: 27780
Number of extensions: 265808
Number of successful extensions: 909
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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