Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15f07
         (611 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S61883-1|AAB26991.2| 2068|Drosophila melanogaster transcription ...    40   0.002
BT024196-1|ABC86258.1| 1964|Drosophila melanogaster RE63802p pro...    40   0.002
BT004888-1|AAO47866.1| 2096|Drosophila melanogaster RE74933p pro...    40   0.002
AE014297-491|AAF54102.3| 2065|Drosophila melanogaster CG17603-PA...    40   0.002
AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC...    40   0.002
AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB...    40   0.002
AE001572-25|AAD19815.1| 2065|Drosophila melanogaster transcripti...    40   0.002

>S61883-1|AAB26991.2| 2068|Drosophila melanogaster transcription
           factor TFIID 230kda subunit protein.
          Length = 2068

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 21/40 (52%), Positives = 27/40 (67%)
 Frame = +2

Query: 173 DSDEQGDHSRSGLDLTGFLFGNIDERGQLEDDGLLDGESK 292
           +SD++G    +GLDLTG LFGNID  G+L  D   DGE +
Sbjct: 7   NSDDEGSIG-NGLDLTGILFGNIDSEGRLLQDD--DGEGR 43


>BT024196-1|ABC86258.1| 1964|Drosophila melanogaster RE63802p
           protein.
          Length = 1964

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 21/40 (52%), Positives = 27/40 (67%)
 Frame = +2

Query: 173 DSDEQGDHSRSGLDLTGFLFGNIDERGQLEDDGLLDGESK 292
           +SD++G    +GLDLTG LFGNID  G+L  D   DGE +
Sbjct: 7   NSDDEGSIG-NGLDLTGILFGNIDSEGRLLQDD--DGEGR 43


>BT004888-1|AAO47866.1| 2096|Drosophila melanogaster RE74933p
           protein.
          Length = 2096

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 21/40 (52%), Positives = 27/40 (67%)
 Frame = +2

Query: 173 DSDEQGDHSRSGLDLTGFLFGNIDERGQLEDDGLLDGESK 292
           +SD++G    +GLDLTG LFGNID  G+L  D   DGE +
Sbjct: 7   NSDDEGSIG-NGLDLTGILFGNIDSEGRLLQDD--DGEGR 43


>AE014297-491|AAF54102.3| 2065|Drosophila melanogaster CG17603-PA,
           isoform A protein.
          Length = 2065

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 21/40 (52%), Positives = 27/40 (67%)
 Frame = +2

Query: 173 DSDEQGDHSRSGLDLTGFLFGNIDERGQLEDDGLLDGESK 292
           +SD++G    +GLDLTG LFGNID  G+L  D   DGE +
Sbjct: 7   NSDDEGSIG-NGLDLTGILFGNIDSEGRLLQDD--DGEGR 43


>AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC,
           isoform C protein.
          Length = 2098

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 21/40 (52%), Positives = 27/40 (67%)
 Frame = +2

Query: 173 DSDEQGDHSRSGLDLTGFLFGNIDERGQLEDDGLLDGESK 292
           +SD++G    +GLDLTG LFGNID  G+L  D   DGE +
Sbjct: 7   NSDDEGSIG-NGLDLTGILFGNIDSEGRLLQDD--DGEGR 43


>AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB,
           isoform B protein.
          Length = 2129

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 21/40 (52%), Positives = 27/40 (67%)
 Frame = +2

Query: 173 DSDEQGDHSRSGLDLTGFLFGNIDERGQLEDDGLLDGESK 292
           +SD++G    +GLDLTG LFGNID  G+L  D   DGE +
Sbjct: 7   NSDDEGSIG-NGLDLTGILFGNIDSEGRLLQDD--DGEGR 43


>AE001572-25|AAD19815.1| 2065|Drosophila melanogaster transcription
           factor protein.
          Length = 2065

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 21/40 (52%), Positives = 27/40 (67%)
 Frame = +2

Query: 173 DSDEQGDHSRSGLDLTGFLFGNIDERGQLEDDGLLDGESK 292
           +SD++G    +GLDLTG LFGNID  G+L  D   DGE +
Sbjct: 7   NSDDEGSIG-NGLDLTGILFGNIDSEGRLLQDD--DGEGR 43


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,388,378
Number of Sequences: 53049
Number of extensions: 340441
Number of successful extensions: 647
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)