Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15f06
         (672 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92827-9|CAB54200.1|  510|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z92827-8|CAB07330.1|  527|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z81565-4|CAB04582.3|  511|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z54269-6|CAB54208.1|  510|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z54269-5|CAA91023.1|  527|Caenorhabditis elegans Hypothetical pr...    28   5.3  

>Z92827-9|CAB54200.1|  510|Caenorhabditis elegans Hypothetical
           protein F02C12.5c protein.
          Length = 510

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 457 TTQDLNGGCALYCCCGFYTLSTKTVAANMLLAHH 356
           T +D+ G C ++   GF T +     A+ LLA H
Sbjct: 306 TAEDVIGACFVFLLAGFDTTANSLAYASYLLAKH 339


>Z92827-8|CAB07330.1|  527|Caenorhabditis elegans Hypothetical
           protein F02C12.5a protein.
          Length = 527

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 457 TTQDLNGGCALYCCCGFYTLSTKTVAANMLLAHH 356
           T +D+ G C ++   GF T +     A+ LLA H
Sbjct: 306 TAEDVIGACFVFLLAGFDTTANSLAYASYLLAKH 339


>Z81565-4|CAB04582.3|  511|Caenorhabditis elegans Hypothetical
           protein K06G5.2 protein.
          Length = 511

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 457 TTQDLNGGCALYCCCGFYTLSTKTVAANMLLAHH 356
           T++D+ G C ++   GF T +     A+ LLA H
Sbjct: 307 TSEDVIGACFVFLLAGFDTTANTLAYASYLLAKH 340


>Z54269-6|CAB54208.1|  510|Caenorhabditis elegans Hypothetical
           protein F02C12.5c protein.
          Length = 510

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 457 TTQDLNGGCALYCCCGFYTLSTKTVAANMLLAHH 356
           T +D+ G C ++   GF T +     A+ LLA H
Sbjct: 306 TAEDVIGACFVFLLAGFDTTANSLAYASYLLAKH 339


>Z54269-5|CAA91023.1|  527|Caenorhabditis elegans Hypothetical
           protein F02C12.5a protein.
          Length = 527

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 457 TTQDLNGGCALYCCCGFYTLSTKTVAANMLLAHH 356
           T +D+ G C ++   GF T +     A+ LLA H
Sbjct: 306 TAEDVIGACFVFLLAGFDTTANSLAYASYLLAKH 339


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,817,381
Number of Sequences: 27780
Number of extensions: 198179
Number of successful extensions: 401
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 401
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)