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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15f02
         (673 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0737 - 31328473-31330513,31331015-31331184                      165   3e-41
08_01_0471 - 4147170-4149207,4150535-4150692                          159   2e-39
04_04_1339 + 32760424-32760584,32762428-32764462                      157   1e-38
04_04_1337 + 32737051-32737202,32737314-32737809                       79   3e-15
03_06_0221 + 32458867-32459149,32460271-32460386,32460461-324608...    79   4e-15
05_01_0355 - 2774217-2774318,2774608-2774775,2774872-2775090,277...    66   2e-11
01_04_0018 + 15128174-15128316,15128445-15128544,15129573-151297...    61   9e-10
01_04_0017 - 15113479-15113580,15113950-15114117,15115011-151152...    61   9e-10
05_02_0021 - 5674587-5674799,5674898-5675031,5675129-5675207,567...    57   1e-08
12_01_0812 - 7460448-7460507,7460595-7460672,7460772-7460981,746...    52   3e-07
01_07_0093 + 41045841-41045968,41046068-41046161,41046740-410469...    38   0.006
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119...    29   2.6  
06_03_0921 + 25949453-25949986,25950150-25950188,25950380-259504...    29   2.6  
03_06_0060 + 31341233-31342009,31342752-31342871,31343401-313435...    29   4.5  
01_06_0272 - 28065896-28065991,28066069-28066227,28066918-280669...    29   4.5  
07_03_0248 + 15798650-15799075,15799143-15799619,15799713-15800948     28   7.8  
04_04_0659 + 27008867-27008963,27011209-27011280,27011833-270119...    28   7.8  
01_05_0801 + 25353708-25353914,25354307-25354429,25355035-253552...    28   7.8  

>02_05_0737 - 31328473-31330513,31331015-31331184
          Length = 736

 Score =  165 bits (401), Expect = 3e-41
 Identities = 81/170 (47%), Positives = 114/170 (67%)
 Frame = +2

Query: 161 MDEKYVERIWSLLKNAIQEIQKKNNSGLSFEELYRNAYTMVLHKHGERLYTGLKEVVTQH 340
           +D KY ER W +L++AI EI   N SGLSFEELYR+AY MVLHK+GE+LY GL+  +T  
Sbjct: 23  LDPKYAERTWKVLEHAIHEIYNHNASGLSFEELYRSAYNMVLHKYGEKLYDGLERTMTWR 82

Query: 341 LETKVREDVLHSLHNGFLQTLNNAWTDHQTSMVMIRDILMYMDRVFVQQNEVDNVYNLGL 520
           L+ ++ + +  +    FL+ LN  W DH  ++ MIRDILMYMDR +V Q+    V+ LGL
Sbjct: 83  LK-EISKSIEAAQGGLFLEELNAKWMDHNKALQMIRDILMYMDRTYVPQSRRTPVHELGL 141

Query: 521 IIFRDQVVRYGCIRDHLRQTLLELVARERRGEVVDRLAIRNACQMLMVLG 670
            ++RD ++    I   L  TLL+L+ RER GE+++R  +R+  +MLM LG
Sbjct: 142 NLWRDHIIHSPMIHSRLLDTLLDLIHRERMGEMINRGLMRSITKMLMDLG 191


>08_01_0471 - 4147170-4149207,4150535-4150692
          Length = 731

 Score =  159 bits (386), Expect = 2e-39
 Identities = 81/169 (47%), Positives = 110/169 (65%)
 Frame = +2

Query: 164 DEKYVERIWSLLKNAIQEIQKKNNSGLSFEELYRNAYTMVLHKHGERLYTGLKEVVTQHL 343
           D ++ E+ W  L +AI+EI   N SGLSFEELYR AY +VLHKHG +LY  L E +  HL
Sbjct: 20  DPRFFEKAWRKLDDAIREIYNHNASGLSFEELYRTAYNLVLHKHGPKLYDKLTENMEDHL 79

Query: 344 ETKVREDVLHSLHNGFLQTLNNAWTDHQTSMVMIRDILMYMDRVFVQQNEVDNVYNLGLI 523
           + ++R  +  +    FL  L   W DH  ++ MIRDILMYMDRVF+  N+   V++LGL 
Sbjct: 80  Q-EMRVSIEAAQGGLFLVELQRKWDDHNKALQMIRDILMYMDRVFIPTNKKTPVFDLGLD 138

Query: 524 IFRDQVVRYGCIRDHLRQTLLELVARERRGEVVDRLAIRNACQMLMVLG 670
           ++RD +VR   I   L  TLL+L+ RER GEV++R  +R+  +MLM LG
Sbjct: 139 LWRDTIVRSPKIHGRLLDTLLDLIHRERTGEVINRSLMRSTTKMLMDLG 187


>04_04_1339 + 32760424-32760584,32762428-32764462
          Length = 731

 Score =  157 bits (380), Expect = 1e-38
 Identities = 85/171 (49%), Positives = 110/171 (64%), Gaps = 2/171 (1%)
 Frame = +2

Query: 164 DEKYVERIWSLLKNAIQEIQKKNNSGLSFEELYRNAYTMVLHKHGERLYTGLKEVVTQHL 343
           D K  ++ W  L++AI+EI   N SGLSFEELYR AY +VLHKHG +LY  L E +  HL
Sbjct: 21  DPKSFDKSWKKLEDAIREIYNHNASGLSFEELYRTAYNLVLHKHGLKLYDKLTENLKGHL 80

Query: 344 ETKVR--EDVLHSLHNGFLQTLNNAWTDHQTSMVMIRDILMYMDRVFVQQNEVDNVYNLG 517
           +   R  ED   SL   FL+ L   W DH  ++ MIRDILMYMDR F+  N+   V++LG
Sbjct: 81  KEMCRSIEDAQGSL---FLEELQRRWADHNKALQMIRDILMYMDRTFIATNKKTPVFDLG 137

Query: 518 LIIFRDQVVRYGCIRDHLRQTLLELVARERRGEVVDRLAIRNACQMLMVLG 670
           L ++RD VVR   I   L  TLLEL+ RER GE+++R  +R+  +MLM LG
Sbjct: 138 LELWRDIVVRTPKIHGRLLDTLLELIHRERMGEMINRGLMRSTTKMLMDLG 188


>04_04_1337 + 32737051-32737202,32737314-32737809
          Length = 215

 Score = 79.0 bits (186), Expect = 3e-15
 Identities = 53/174 (30%), Positives = 88/174 (50%), Gaps = 5/174 (2%)
 Frame = +2

Query: 161 MDEKYVERIWSLLKNAIQEIQKKNNSGLSFEELYRNAYTMVLHKHGERLYTGLKEVVTQH 340
           MD          + +AI++I  ++   L+FE+LYR  Y +VL+KHGE +Y+ +   +T  
Sbjct: 17  MDAALAASSCQAVTDAIRDIYAQDMEKLNFEQLYRRVYEVVLNKHGELMYSEVATALTAE 76

Query: 341 LETKVREDVLHSLHNG-----FLQTLNNAWTDHQTSMVMIRDILMYMDRVFVQQNEVDNV 505
           +E  +R  ++     G     FL+ L + W  H  ++  +RD++MYM+R F+      +V
Sbjct: 77  VE-GLRTSLVAVADGGGGGGAFLRELLSKWRRHTEAVAAVRDMVMYMERTFIVTYRKVSV 135

Query: 506 YNLGLIIFRDQVVRYGCIRDHLRQTLLELVARERRGEVVDRLAIRNACQMLMVL 667
             LG+ ++RD VV   C  D +   L+E V RER         +    +ML  L
Sbjct: 136 QELGVKLWRDGVV---CSGD-VMPRLVEAVRRERAAAAEPGELMAGVAEMLTKL 185


>03_06_0221 +
           32458867-32459149,32460271-32460386,32460461-32460807,
           32461231-32461411,32461507-32461629,32461828-32462115,
           32462536-32462688,32463068-32463169,32463260-32463313,
           32463518-32463624,32463867-32463927,32464019-32464150,
           32464245-32464382,32464459-32464539,32464635-32464715,
           32465133-32465213,32465300-32465413
          Length = 813

 Score = 78.6 bits (185), Expect = 4e-15
 Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 2/169 (1%)
 Frame = +2

Query: 173 YVERIWSLLKNAIQEIQKKNNSGLSFEELYRNAYTMVLHKHGERLYTGLKEVVTQHLETK 352
           + E  W++LK+AI  I  K       E+LY+ A  + LHK G  LY  +K+    H+  K
Sbjct: 103 FEEDTWAILKDAITAIFLKQKLSCDVEKLYQAAGDLCLHKLGANLYERIKKECEVHISAK 162

Query: 353 VREDVLHSLH-NGFLQTLNNAWTDHQTSMVMIRDILMYMDRVFVQQ-NEVDNVYNLGLII 526
           +   V  S     FL  +   W D    M++IR I + +D  +V+    + +V+++GL +
Sbjct: 163 ISALVGQSPDLVVFLSLVQRTWQDFCDQMLIIRGIALLLDVKYVKNVANICSVWDMGLKL 222

Query: 527 FRDQVVRYGCIRDHLRQTLLELVARERRGEVVDRLAIRNACQMLMVLGI 673
           FR  +     I       LL L+  ER GE +DR  + +  +M   LG+
Sbjct: 223 FRKHLSLSPEIEHKTVTGLLRLIESERLGEAIDRTLLSHLLKMFTALGM 271


>05_01_0355 -
           2774217-2774318,2774608-2774775,2774872-2775090,
           2775176-2775319,2775485-2775767,2775874-2775929,
           2776012-2776161,2776254-2776340,2776414-2776449,
           2777100-2777162,2777247-2777327,2777407-2777496,
           2777690-2777767,2777855-2778058,2778139-2778186,
           2778262-2778447,2779879-2779978,2780121-2780260
          Length = 744

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 40/164 (24%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
 Frame = +2

Query: 197 LKNAIQEIQKKNNSGLSFEELYRNAYTMVL----HKHGERLYTGLKEVVTQHLETKVRED 364
           LKN ++   +   S   +  LY   Y M      H + ++LY   +E   +++ + V   
Sbjct: 25  LKNILEGKPEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYDKYRESFEEYITSMVLPS 84

Query: 365 VLHSLHNGF-LQTLNNAWTDHQTSMVMIRDILMYMDRVFVQQNEVDNVYNLGLIIFRDQV 541
            L   H+ F L+ L   W++H+  +  +     Y+DR F+ +  +  +  +GL  FRD +
Sbjct: 85  -LRDKHDEFMLRELVKRWSNHKIMVRWLSRFFFYLDRYFISRRSLIPLEQVGLTCFRDLI 143

Query: 542 VRYGCIRDHLRQTLLELVARERRGEVVDRLAIRNACQMLMVLGI 673
             Y  I+  ++  ++ L+ +ER GE +DR  ++N   + + +G+
Sbjct: 144 --YQEIKGQVKGAVIALIDKEREGEQIDRALLKNVLGIFVEIGL 185


>01_04_0018 +
           15128174-15128316,15128445-15128544,15129573-15129758,
           15129877-15129924,15130006-15130209,15130476-15130565,
           15130667-15130747,15130827-15130889,15131794-15131832,
           15131914-15132000,15132103-15132252,15132331-15132386,
           15132493-15132775,15132989-15133132,15133233-15133451,
           15133528-15133695,15133868-15133969
          Length = 720

 Score = 60.9 bits (141), Expect = 9e-10
 Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 5/146 (3%)
 Frame = +2

Query: 248 FEELYRNAYTMVLHK----HGERLYTGLKEVVTQHLETKVREDVLHSLHNGFL-QTLNNA 412
           +  LY   Y M   K    + + LY   K+ +  H+E+ V    L+  H  FL + +   
Sbjct: 43  YMHLYTTVYNMCTQKPPNDYSQVLYDRYKQALDDHIESVVLPS-LNEKHGVFLLREIVQR 101

Query: 413 WTDHQTSMVMIRDILMYMDRVFVQQNEVDNVYNLGLIIFRDQVVRYGCIRDHLRQTLLEL 592
           W  H+  +  +R    Y+DR +V +  +D++ +LG   FRD V  +  ++  +   ++ +
Sbjct: 102 WEKHKLMVRWLRRFFDYLDRYYVTRRSLDSLKDLGWSSFRDLV--FDKLKSTVATIMIGM 159

Query: 593 VARERRGEVVDRLAIRNACQMLMVLG 670
           +  ER G ++DR  ++NA  + + +G
Sbjct: 160 IDDEREGNLIDRPLLKNALDIYVEIG 185


>01_04_0017 -
           15113479-15113580,15113950-15114117,15115011-15115229,
           15115303-15115446,15115558-15115840,15115936-15115991,
           15116067-15116216,15116299-15116385,15116463-15116498,
           15116746-15116808,15116887-15116967,15117053-15117142,
           15117349-15117426,15117510-15117731,15117788-15117835,
           15117948-15118133,15120910-15121009,15121107-15121246
          Length = 750

 Score = 60.9 bits (141), Expect = 9e-10
 Identities = 41/177 (23%), Positives = 85/177 (48%), Gaps = 9/177 (5%)
 Frame = +2

Query: 170 KYVERIWSLLKNAIQEIQKKNNSGLSFEELYRNAYTMVL----HKHGERLYTGLKEVVTQ 337
           +++++  + LKN ++   +   S   +  LY   Y M      H + ++LY   +E   +
Sbjct: 16  EFMQKGITKLKNILEGKPEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYEKYRESFEE 75

Query: 338 HLETKVREDVLHSLHNGF-LQTLNNAWTDHQTSMVMIRDILMYMDRVFVQQNEVDNVYNL 514
           ++ + V    L   H+ F L+ L   W++H+  +  +     Y+DR F+ +  +  +  +
Sbjct: 76  YITSMVLPS-LREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFISRRSLPQLSEV 134

Query: 515 GLIIFRDQVVR--YGCIRDHLRQT--LLELVARERRGEVVDRLAIRNACQMLMVLGI 673
           GL  FRD V +   G ++  +      LE + +ER GE +DR  ++N   + + +G+
Sbjct: 135 GLSCFRDLVYQEIKGKVKSAVISLTYFLEQIDQEREGEQIDRALLKNVLDIFVEIGL 191


>05_02_0021 -
           5674587-5674799,5674898-5675031,5675129-5675207,
           5675737-5675799,5676420-5676482,5676557-5676673,
           5676756-5676803,5676918-5677103,5677948-5678047,
           5678323-5678562,5678583-5678686
          Length = 448

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
 Frame = +2

Query: 239 GLSFEELYRNAYTMVL-------HK-HGERLYTGLKEVVTQHLETKVREDVLHSLHNGFL 394
           G S +E Y + YT+V        HK + + LY   K+ +  HL++ V   +     N  L
Sbjct: 104 GFSPDE-YMHIYTLVYYMCTQKGHKDYPKELYHLCKQALDDHLDSIVLPSLNEKHGNFLL 162

Query: 395 QTLNNAWTDHQTSMVMIRDILMYMDRVFVQQNEVDNVYNLGLIIFRDQVVRYGCIRDHLR 574
             +  +W  H+  +  +R    Y+DRV +    + ++ ++G I FRD V  +  ++  L 
Sbjct: 163 AEMLQSWEKHKLMVRWLRRFFDYLDRVSITWKSLHSLEHMGWIGFRDMV--FNKLKSTLT 220

Query: 575 QTLLELVARERRGEVVDRLAIRNACQMLMVLG 670
            T++ ++  ER G ++DR  ++N   M    G
Sbjct: 221 TTVIGMINDERNGLLIDRALLKNVIHMCNEFG 252


>12_01_0812 -
           7460448-7460507,7460595-7460672,7460772-7460981,
           7461095-7461142,7461270-7461455,7461653-7461656,
           7461766-7461893
          Length = 237

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 24/94 (25%), Positives = 54/94 (57%)
 Frame = +2

Query: 392 LQTLNNAWTDHQTSMVMIRDILMYMDRVFVQQNEVDNVYNLGLIIFRDQVVRYGCIRDHL 571
           L+ L + W +H+  ++       Y+DR ++ +  +  +  L L  FRDQV  Y  ++D +
Sbjct: 58  LKGLVDRWRNHKKIVISETRFFFYLDRYYILRKSLVPLEQLNLCSFRDQV--YSELKDKI 115

Query: 572 RQTLLELVARERRGEVVDRLAIRNACQMLMVLGI 673
            +T+++++  ER G+V+DR  +++   + + +G+
Sbjct: 116 TRTVVDMINDERDGKVIDRDLLKDVLDVYVQIGL 149


>01_07_0093 +
           41045841-41045968,41046068-41046161,41046740-41046925,
           41047035-41047082,41047158-41047343,41047430-41047516,
           41048059-41048145,41048231-41048317
          Length = 300

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 2/124 (1%)
 Frame = +2

Query: 260 YRNAYTMVLHK--HGERLYTGLKEVVTQHLETKVREDVLHSLHNGFLQTLNNAWTDHQTS 433
           Y  AY M + K  + + +Y   K      +   V   ++H   + F + L   W+++   
Sbjct: 42  YDCAYRMAVQKDQYCQEMYNSYKATHESCVCAMVLPHLMHKQGDLFWRELVKMWSNYCAM 101

Query: 434 MVMIRDILMYMDRVFVQQNEVDNVYNLGLIIFRDQVVRYGCIRDHLRQTLLELVARERRG 613
           +      L Y+DR FV   ++ ++ +     F   V  Y    + +   LL L+ +ER G
Sbjct: 102 IRFTTGFLAYLDRCFVTHKKLPSLEDAAATSFFSPVFSY--FNNEISDVLLTLIRQERDG 159

Query: 614 EVVD 625
             VD
Sbjct: 160 CNVD 163


>11_06_0458 +
           23808402-23808469,23808800-23809684,23810011-23811961,
           23812210-23812285,23813064-23813072,23813243-23813335,
           23813578-23813581,23813780-23814703,23814926-23815909,
           23816073-23816118,23816376-23816951,23817253-23817798,
           23817820-23818416
          Length = 2252

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 23/66 (34%), Positives = 27/66 (40%)
 Frame = -2

Query: 423 WSVHALLRVCKKPLCNECNTSSRTLVSRC*VTTSLRPVYSLSPCLCSTIVYALR*SSSND 244
           WS  A   +    L N C        SR  VTT +  V       C  +VY LR  S +D
Sbjct: 327 WSAQAWKTIRYSLLENNCG-------SRILVTTRIGTVAKSCSSPCLNLVYELRVLSEDD 379

Query: 243 SPELFF 226
           S  LFF
Sbjct: 380 SKRLFF 385


>06_03_0921 + 25949453-25949986,25950150-25950188,25950380-25950445,
            25950526-25950669,25951416-25951612,25952281-25952443,
            25952760-25952873,25953304-25953401,25953964-25954042,
            25954356-25954514,25954690-25954779,25955790-25955923,
            25956513-25956672,25956826-25956909,25957000-25957167,
            25957321-25957446,25958088-25958225,25958311-25958414,
            25958832-25958895,25959229-25959317,25959393-25959534,
            25959937-25960000,25960085-25960152,25960399-25960521,
            25960604-25960669,25960857-25960962,25961076-25961167,
            25961243-25961344
          Length = 1170

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/65 (24%), Positives = 33/65 (50%)
 Frame = +2

Query: 212  QEIQKKNNSGLSFEELYRNAYTMVLHKHGERLYTGLKEVVTQHLETKVREDVLHSLHNGF 391
            + +++  N  ++  +L RN    +  +H + L T LKE+V  H + +  ED+   L    
Sbjct: 834  ERVEQSVNRMMTIIDLARN----IRERHNKALKTPLKEMVIVHPDNEFLEDITGKLKEYV 889

Query: 392  LQTLN 406
            ++ +N
Sbjct: 890  MEEMN 894


>03_06_0060 +
           31341233-31342009,31342752-31342871,31343401-31343517,
           31343615-31343704,31344279-31344386,31345124-31345306
          Length = 464

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 228 KTTLDYHLKSFTVMHIQWYCTNMEKDYTLASRK 326
           K   ++ L+     H+QW C N + D  LA++K
Sbjct: 223 KVDCEHLLRILCNRHLQWRCVNAQADAALAAQK 255


>01_06_0272 -
           28065896-28065991,28066069-28066227,28066918-28066966,
           28067350-28067474,28067834-28068004,28068222-28068571,
           28069322-28069478
          Length = 368

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
 Frame = +2

Query: 179 ERIWSLLKNAIQEIQKKNNSGLSFEELYR---NAYTMVLHKHGERLYTGLKEV-VTQ-HL 343
           E+ +S + + +++++ K+      EE Y    N++   L  H E     L ++ V+Q HL
Sbjct: 242 EKQYSEISSEMKDLEIKSKEFEELEERYWHEFNSFQFQLTSHQEERDAILAKIEVSQVHL 301

Query: 344 E----TKVREDVLHSLHNGFLQTLNN 409
           E    T V  D  +  H+G + T+NN
Sbjct: 302 ELLKQTNVLNDAFYISHDGVIGTINN 327


>07_03_0248 + 15798650-15799075,15799143-15799619,15799713-15800948
          Length = 712

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 566 HLRQTLLELVARERRGEVVDRLAIRNACQMLMVLG 670
           ++   +L+   +E R  +VD  A+ N C+ L VLG
Sbjct: 583 YMATLVLDAAVQEARKHLVDATAMANKCKKLRVLG 617


>04_04_0659 +
           27008867-27008963,27011209-27011280,27011833-27011907,
           27012071-27012181,27012609-27012713,27012997-27013049,
           27013549-27013674,27013742-27013861
          Length = 252

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 425 QTSMVMIRDILMYMDRVFVQQNEVDNVYNLGL 520
           Q S   +   ++   RV +Q NEV  VYNLG+
Sbjct: 218 QMSYTNLMQHIILSPRVSLQANEVSEVYNLGI 249


>01_05_0801 +
           25353708-25353914,25354307-25354429,25355035-25355205,
           25355303-25355392,25355497-25355583,25355664-25355719,
           25355812-25355905,25356032-25356144,25356211-25356283,
           25356603-25356683,25356865-25356951,25357031-25357135,
           25357279-25357385,25357481-25357541,25357931-25358158,
           25359720-25360677,25360816-25360997,25361237-25361326,
           25361422-25361709,25361844-25362056,25362560-25362784
          Length = 1212

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 255 SSNDSPELFFFCISCMAFFNKLHIRSTY 172
           S    P + F C+ C+ FFN  H+ +TY
Sbjct: 508 SQQTCPVICFACLMCLRFFNS-HLLATY 534


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,335,107
Number of Sequences: 37544
Number of extensions: 359799
Number of successful extensions: 958
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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