Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15f01
(606 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 32 0.37
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 31 0.84
AF039050-14|AAC47928.1| 69|Caenorhabditis elegans Neuropeptide... 30 1.1
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 29 1.9
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 29 1.9
Z81544-3|CAB04435.1| 255|Caenorhabditis elegans Hypothetical pr... 28 4.5
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 28 4.5
AL031620-5|CAA20926.1| 277|Caenorhabditis elegans Hypothetical ... 28 4.5
Z68314-1|CAA92658.1| 102|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H... 28 5.9
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 27 7.9
U46753-7|AAA85763.2| 223|Caenorhabditis elegans Hypothetical pr... 27 7.9
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 27 7.9
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 31.9 bits (69), Expect = 0.37
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 4/107 (3%)
Frame = +3
Query: 279 ATAARVSVTEIPV*VTATPVSVI----RVKVIRAGLAVTMVVTKADIKAVIREASADFQG 446
+T R++ T+ +T TPV V + L T T+ K A
Sbjct: 339 STTKRLTTTKATTVLTTTPVKVTPATTTLPTTSLALETTTTATRTTAKITAVATVARTNT 398
Query: 447 TRAMEGTDRDIRAAVPVTRATNLDTTNTDPVSTGTPRPTLVISLEAT 587
T+ T A+P T ++ T +TD ST T +S++AT
Sbjct: 399 TQPPTTTPLSSTTALPTTLTSSSSTESTDGSSTQTSTHPSQLSVKAT 445
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 30.7 bits (66), Expect = 0.84
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +3
Query: 447 TRAMEGTDRDIRAAVPVTRATNLDTTNTDPVST----GTPRPTLVISLEATATATAT 605
T + T + A P T +T TT+ DP ST TP P+ ++++T TA T
Sbjct: 159 TLSPPSTVQSTTTAKPTTTSTITPTTSADPTSTITTSTTPNPSSPSTVQSTTTAEPT 215
>AF039050-14|AAC47928.1| 69|Caenorhabditis elegans
Neuropeptide-like protein protein30 protein.
Length = 69
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +2
Query: 494 GYPGYKSGYNQYRSSFDRYPATNAGNFFGGYGDG 595
GY GY GY Y + Y G +GGYG G
Sbjct: 35 GYGGYGRGYGGYGRGYGGYGRGMWGRPYGGYGWG 68
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 29.5 bits (63), Expect = 1.9
Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 5/111 (4%)
Frame = +3
Query: 282 TAARVSVTEIPV*VTATPV---SVIRVKVIRAGLAVTMVVTKADIKAVIREASADFQGTR 452
T AR + T IP T T + S + V + T V T + V + +
Sbjct: 235 TTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTST 294
Query: 453 AMEGTDRDIRAA--VPVTRATNLDTTNTDPVSTGTPRPTLVISLEATATAT 599
A T + VT +TN ++ T P ++ TP P E T TAT
Sbjct: 295 ASTTTTTPSTSTHTTTVTYSTNATSSTTSPTTSPTPEP------EPTTTAT 339
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 29.5 bits (63), Expect = 1.9
Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 5/111 (4%)
Frame = +3
Query: 282 TAARVSVTEIPV*VTATPV---SVIRVKVIRAGLAVTMVVTKADIKAVIREASADFQGTR 452
T AR + T IP T T + S + V + T V T + V + +
Sbjct: 217 TTARTTTTMIPTTPTTTTIASTSTVTSIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTST 276
Query: 453 AMEGTDRDIRAA--VPVTRATNLDTTNTDPVSTGTPRPTLVISLEATATAT 599
A T + VT +TN ++ T P ++ TP P E T TAT
Sbjct: 277 ASTTTTTPSTSTHTTTVTYSTNATSSTTSPTTSPTPEP------EPTTTAT 321
>Z81544-3|CAB04435.1| 255|Caenorhabditis elegans Hypothetical
protein F49C5.7 protein.
Length = 255
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 450 RAMEGTDRDIRAAVPVTRATNLDTTNTDPVSTGTPRPTLVISLEATA-TATAT 605
R ++ T + + + + T+NTD ST TP P+ S TA ++TAT
Sbjct: 26 RRLKTTIQPSTSTTATSSSATETTSNTDSSSTATPSPSSASSTTPTAQSSTAT 78
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 489 VPVTRATNLDTTNTDPV--STGTPRPTLVISLEATATATAT 605
VP T ++ TT T PV ++ T PT +T+T+T T
Sbjct: 459 VPTTSSSTTTTTTTTPVPVTSTTTEPTTTTYTTSTSTSTTT 499
>AL031620-5|CAA20926.1| 277|Caenorhabditis elegans Hypothetical
protein C18B12.5 protein.
Length = 277
Score = 28.3 bits (60), Expect = 4.5
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 497 YPGYKSGYNQYRSSFDRYP 553
Y GYK G+++++ SF +YP
Sbjct: 256 YLGYKYGFSEFKLSFKKYP 274
>Z68314-1|CAA92658.1| 102|Caenorhabditis elegans Hypothetical
protein F07H5.6 protein.
Length = 102
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +2
Query: 494 GYPGYKSGYNQ-YRSSFDRYPATNAGNFFGGYGDGY 598
G+ G+ GY Y F Y G GGYG GY
Sbjct: 39 GFGGFSGGYGLGYGGGFGGYGGGFGGYGLGGYGLGY 74
>Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical
protein K09C8.1 protein.
Length = 783
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 428 SLPDNRLDIRLGNHHSYRQTRPDNFDPD 345
+LP + LD HH + Q PDN D D
Sbjct: 627 ALPHDLLDEEHQGHHHHGQVHPDNEDAD 654
>AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H
exchanger isoform 7 protein.
Length = 783
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 428 SLPDNRLDIRLGNHHSYRQTRPDNFDPD 345
+LP + LD HH + Q PDN D D
Sbjct: 627 ALPHDLLDEEHQGHHHHGQVHPDNEDAD 654
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 489 VPVTRATNLDTTNTDPVSTGTPRPTLVISLEATATATA 602
VP T TTNT P + T PT V ++ + TA A
Sbjct: 486 VPTTPTPVPTTTNTPPANPTTATPTTVGTIGTSPTAPA 523
>U46753-7|AAA85763.2| 223|Caenorhabditis elegans Hypothetical
protein C34F11.8 protein.
Length = 223
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 494 GYPGYKSGY-NQYRSSFDRYPATNAGNFFGGYGDGY 598
G G SGY N Y S+ Y G + GGYG GY
Sbjct: 150 GRYGPYSGYGNSYYPSYGGYSGYGGG-YGGGYGGGY 184
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 489 VPVTRATNLDTTNTDPVSTGTPRPTLVISLEATATATAT 605
VP +DT T +T T +PT + S ++T T T
Sbjct: 131 VPPNSTIIIDTETTTTFTTTTEKPTTIPSTTTSSTTTTT 169
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,694,642
Number of Sequences: 27780
Number of extensions: 147261
Number of successful extensions: 613
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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