Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15e14
         (547 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    29   0.076
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    26   0.70 
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    24   3.8  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   5.0  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 29.5 bits (63), Expect = 0.076
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +1

Query: 370 REGVKGRNGVN-EVREGDFR-GNNSNGVNEVREGEIGRKWRVSGVXEGDIRGNNTNGS 537
           +EG+KG  G   E+++ D   GN  N  N    G    + + S V EG  + NN N +
Sbjct: 46  QEGLKGPGGARGELKQFDLPLGNTGNSGNNNNNGVGNHQQQPSPVNEGTGKTNNNNNN 103


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 26.2 bits (55), Expect = 0.70
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +1

Query: 349  RKDEVEVREGVKGRNGVNEVREGDFRGNNSNGVNEVREGEIGRKWRVSGVXEG 507
            RK E + R+  +G  G  + +E   RG+  +  +E  EGE  RK +  G   G
Sbjct: 939  RKGEKKPRKS-QGGGGSRKRKEKARRGSGGDSDSEEEEGEGSRKRKKKGASGG 990


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 403 EVREGDFRGNNSNGVN 450
           EV  G+ RGN  NGVN
Sbjct: 243 EVVRGNQRGNKQNGVN 258


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 245 NQLKNMENVVKLGWKTRD 298
           NQL N +N+VK+G   R+
Sbjct: 194 NQLNNSDNMVKIGIDLRE 211


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 439,216
Number of Sequences: 2352
Number of extensions: 8931
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)