Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15e11
(693 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 36 0.006
SPAC30C2.02 |mmd1||deoxyhypusine hydroxylase |Schizosaccharomyce... 31 0.16
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 30 0.36
SPAC17C9.14 |||Pex19 protein family|Schizosaccharomyces pombe|ch... 29 0.64
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 29 0.84
SPAC4D7.04c |||cis-prenyltransferase |Schizosaccharomyces pombe|... 29 0.84
SPCC338.13 |cog4||Golgi transport complex subunit Cog4 |Schizosa... 28 1.1
SPAC3F10.17 |||ribosome biogenesis protein Ltv1|Schizosaccharomy... 28 1.5
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 28 1.5
SPCC1682.08c |||RNA-binding protein Mcp2|Schizosaccharomyces pom... 27 1.9
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ... 27 2.6
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 27 2.6
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 27 3.4
SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces pombe... 27 3.4
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 26 4.5
SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces pomb... 26 4.5
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 26 5.9
SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase |S... 26 5.9
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 26 5.9
SPAC26H5.04 |||vacuolar import and degradation protein Vid28|Sch... 26 5.9
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 26 5.9
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 26 5.9
SPBC557.05 |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual 25 7.9
SPAC1F7.06 |||ThiJ domain protein|Schizosaccharomyces pombe|chr ... 25 7.9
SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain protein|Schizosacchar... 25 7.9
SPAC14C4.06c |||poly|Schizosaccharomyces pombe|chr 1|||Manual 25 7.9
SPBC20F10.03 |||conserved eukaryotic protein|Schizosaccharomyces... 25 7.9
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1052
Score = 35.9 bits (79), Expect = 0.006
Identities = 25/53 (47%), Positives = 32/53 (60%)
Frame = +2
Query: 65 ENSINQDELIMKQQREIEKEISETIPLVGEIEELQTLEKEYNEDPIYLLKVKD 223
ENSI QDE+ +Q +IEK+ E I V E E L TLE E E P ++V+D
Sbjct: 908 ENSILQDEVEETRQDDIEKDELEDIKEVKEDENLTTLE-ETIEIPANDIEVQD 959
>SPAC30C2.02 |mmd1||deoxyhypusine hydroxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 318
Score = 31.1 bits (67), Expect = 0.16
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 95 MKQQREIEKEISETIPLVGEIEELQTLEKEYNEDPI 202
+ QQ + E +E + +G E L LEK Y EDP+
Sbjct: 90 LDQQVMVRHEAAEALGALGFTESLPVLEKYYKEDPL 125
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 29.9 bits (64), Expect = 0.36
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +2
Query: 11 LKMADDASSSSGITGNTVENSINQDELIMKQQREIEKEISETIPLVGEIEELQTLEKEYN 190
L+ A + GITG + E Q + + QQ ++KE+ + + + E E++ N
Sbjct: 195 LENAKVINEQEGITGQSFERGDAQLQPVKLQQMPMDKEMEKIVEMDLEEEDMMHQNDPNN 254
Query: 191 EDPIYLLKVKDL 226
+ P L + + L
Sbjct: 255 QSPKLLKEFRKL 266
>SPAC17C9.14 |||Pex19 protein family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 232
Score = 29.1 bits (62), Expect = 0.64
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = +2
Query: 23 DDASSSSGITGNTVENSINQDEL---IMKQQREIEKEISETIPLVGEIE-ELQTLEKEYN 190
+D SG+ G+ + +S D+L I++ Q EK+ G +E L +L +
Sbjct: 85 EDLGGPSGLDGSQLSSSFQNDQLLNVILEDQFATEKDSDNGAVNYGALEAALNSLMSQVT 144
Query: 191 EDPIYLLKVKDLSSKY 238
I +KDL + Y
Sbjct: 145 SKEILYEPLKDLEANY 160
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 28.7 bits (61), Expect = 0.84
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 544 GVPSSYYIWPAADRPRILSEFY*RTTHCY*VL*TGSGTDV 663
G+ SS Y+W AA + + T H VL TG GT +
Sbjct: 142 GLASSIYLWSAASGKVVQLHDFGATNHVTSVLWTGKGTQL 181
>SPAC4D7.04c |||cis-prenyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 264
Score = 28.7 bits (61), Expect = 0.84
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = +2
Query: 284 AFSYAYLERLLTDKQEYDKFYEIAKNSKDILVALGFSQFTVEDFYETFMEVIQRVGEHAG 463
AF+++ +E K E D EIAKNS + A G D + + I+ VG+ +
Sbjct: 84 AFTFS-IENFKRSKYEVDMLMEIAKNSLTQITAHG-------DLVDQYGIRIRIVGDLSR 135
Query: 464 STPDLIET 487
PD++ET
Sbjct: 136 LQPDVLET 143
>SPCC338.13 |cog4||Golgi transport complex subunit Cog4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 738
Score = 28.3 bits (60), Expect = 1.1
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = +2
Query: 302 LERLLTDKQEYDKFYEIAKNSKDILVA-LGFSQFTVEDFYETFM---EVIQRV 448
LERLL+D Q +KF + KN + LV +G + + F T + EVI+R+
Sbjct: 32 LERLLSDAQPTEKFNSLIKNMAERLVLFVGQIEELKDAFCNTTIVSEEVIERI 84
>SPAC3F10.17 |||ribosome biogenesis protein Ltv1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 386
Score = 27.9 bits (59), Expect = 1.5
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +2
Query: 392 SQFTVEDFYETFMEVIQRV-GEHAGSTPDLIETVRMELHDKFNKQGYSDYIVVYLRLITS 568
S+ +E Y+ V + G P L E + H N + SD+ + +L+ S
Sbjct: 132 SEVELERTYQDQQSVPDAISGFQPDMDPRLREVLEQLEHSDINDEETSDFDEEFEKLVAS 191
Query: 569 GQLQTDQEFYQNFIE 613
G+ + + Q F+E
Sbjct: 192 GKADESEFYAQPFVE 206
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 27.9 bits (59), Expect = 1.5
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +2
Query: 77 NQDELIMKQQREIEKEI---SETIPLVGEIEELQTLEKE 184
NQ+ LI++++ E+EK I SE + +E Q++E+E
Sbjct: 141 NQNSLILQKKDELEKSIQRCSELEEKINSLESAQSIEQE 179
>SPCC1682.08c |||RNA-binding protein Mcp2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 703
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 89 LIMKQQREIEKEISETIPLVGEIEELQTLEKEYN 190
++ +QQREI+ + + IEELQTL N
Sbjct: 53 VVQRQQREIDNQKRDLCTKTKHIEELQTLLSNAN 86
>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2344
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +2
Query: 158 EELQTLEKEYNEDPIYLLKVKDLSSKYKSIRRTRPDGNCFFRAFSYAYLERLLTD 322
+E+ TL+ +Y+E ++ K +S S R + +FS+A +++L D
Sbjct: 682 DEMYTLDNDYSEPDAFMTAKKKISKLNDSSRAILGWASLLGPSFSFATVKKLCKD 736
>SPBC947.12 |kms2||spindle pole body protein
Kms2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 101 QQREIEKEISETIPLVGEIE-ELQTLEKEYNEDPIYLLKVKDLSSKYKSIRRTRPD 265
Q + EK+ E + E +LQT+ +EY + +++++++L + R+T D
Sbjct: 218 QAKTWEKKFREALRDSKEYAAQLQTIHEEYEQQQAHIVRMEELIHAVEKERKTETD 273
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 26.6 bits (56), Expect = 3.4
Identities = 10/48 (20%), Positives = 30/48 (62%)
Frame = +2
Query: 59 TVENSINQDELIMKQQREIEKEISETIPLVGEIEELQTLEKEYNEDPI 202
+ +NS ++ K++++ + + +T+ +I+E++ +KE +E+P+
Sbjct: 263 SAQNSAKLEKEKAKEKQKDKDQEQDTVSDKNQIDEIEKGQKEVDEEPV 310
>SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 319
Score = 26.6 bits (56), Expect = 3.4
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 308 RLLTDKQEYDKFYEIAKNSKDILVALGFSQFTV-EDFYET 424
RL EYD+FY I S + + SQF + ED ET
Sbjct: 172 RLDPKSSEYDEFYIINYASVTKSITISHSQFAINEDINET 211
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 2 SCYLKMADDASSSSGITGNTVENSINQD 85
SC +K++DD +S+ +T NSI +
Sbjct: 135 SCLIKLSDDEASNKSSRSSTPRNSIKSN 162
>SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1428
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
Frame = +2
Query: 122 EISETIPLVGEIEELQTLEKEYNEDPIYL-------LKVKDLSSKYK 241
+I E L+GEIEE + K +N + I + LK +D+S+ ++
Sbjct: 888 QIREISQLIGEIEEFTKIAKAFNVEAILVDHKVLISLKSRDISNHFQ 934
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 25.8 bits (54), Expect = 5.9
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +2
Query: 59 TVENSINQDELIMKQQREIEKEISETIPLVGEIEELQTLEKEYNEDPIYLLKVKDLSSKY 238
TVEN++N DE+ E +E+ ++I + ++ +L+ K + IY L V +
Sbjct: 583 TVENNVNVDEI------ENYEEVRDSI--LKKLSDLRDRPKRSEKPRIYHLDVASMYPNI 634
Query: 239 KSIRRTRPD 265
R +PD
Sbjct: 635 MITNRLQPD 643
>SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 25.8 bits (54), Expect = 5.9
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 131 ETIPLVGEIEELQTLEKEYN 190
+T+P +G++ LQ + KEYN
Sbjct: 206 DTLPEIGKLFHLQEVHKEYN 225
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 25.8 bits (54), Expect = 5.9
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +2
Query: 86 ELIMKQQREIEKEISETIPLVGEIEELQT 172
E I+K +E+E E+ TIP++ + +E++T
Sbjct: 28 EGIVKAYKELEAELPVTIPVIIDGKEVET 56
>SPAC26H5.04 |||vacuolar import and degradation protein
Vid28|Schizosaccharomyces pombe|chr 1|||Manual
Length = 729
Score = 25.8 bits (54), Expect = 5.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 430 HKSFVKIFNGELRKP*GDENIFRIFC 353
+K V +F E+ P GDE I ++FC
Sbjct: 269 NKDKVALFKSEIFGPNGDEYITQLFC 294
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 25.8 bits (54), Expect = 5.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 339 LSYSCLSVSKRSKYAYENARKKQLPSGR 256
L Y C VSKR K AY+ ++K+L + +
Sbjct: 1031 LLYDCCQVSKREK-AYKQLKQKKLNNAK 1057
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 25.8 bits (54), Expect = 5.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 176 EKEYNEDPIYLLKVKDLSSKYKSIR 250
E+ YN YL + D KYKS+R
Sbjct: 293 EESYNPPEEYLKQSSDFPKKYKSLR 317
>SPBC557.05 |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 433
Score = 25.4 bits (53), Expect = 7.9
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -3
Query: 652 HFLSTKLSNSAWSFNKILIKFLV 584
HFL + N W+ N++ I F +
Sbjct: 352 HFLKISVGNKLWTLNRVEIPFKI 374
>SPAC1F7.06 |||ThiJ domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 251
Score = 25.4 bits (53), Expect = 7.9
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 332 YDKFYEIAKNSKDILVALGFSQFTVEDFYETFME-VIQRVGEHAGSTPDLIETVRMELHD 508
Y+ F +N DI++A + +D ++F + I + S PD +++
Sbjct: 43 YEAFKVFEENGFDIVIASDTGDYGFDD--KSFRDPAIVDETQSIFSNPDCSLMKKLKNIA 100
Query: 509 KFNKQGYSDYIVVYL 553
+ ++ SDY++VY+
Sbjct: 101 RLDRLNPSDYVIVYI 115
>SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 682
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2
Query: 410 LQR*TAKTLRRREYL*NFLLFRKTYHIPAYQSV 312
+Q+ +K +R + + NF + YHIPA +SV
Sbjct: 123 IQKQHSKLRQRLDSILNFSRLQPAYHIPARKSV 155
>SPAC14C4.06c |||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 307
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 92 IMKQQREIEKEISETIPLVGEIEELQTLEKEYNEDPIYLLKVKDLSSKYKS 244
+ Q E+EK + ++ V +I+E+ +EKE + V + S + +S
Sbjct: 71 LFNQIEELEKSKNASVESVSKIDEIDFIEKESTDKSQQSFSVPETSIQPQS 121
>SPBC20F10.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 446
Score = 25.4 bits (53), Expect = 7.9
Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Frame = +2
Query: 17 MADDAS--SSSGITGNTVENSIN--QDELIMKQQREIEKEISETIPLVGEIEELQTLEKE 184
M+DD S + S ++G+ + S+ +D I+K + +E+ TI + E++++ E+E
Sbjct: 11 MSDDDSFDTISILSGSMDQLSVGSMEDSGILKGSKTWLEELESTIDDLIEVKKIGAKERE 70
Query: 185 YNEDPIYLL 211
+ + IY++
Sbjct: 71 EHLEKIYVI 79
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,903,276
Number of Sequences: 5004
Number of extensions: 60469
Number of successful extensions: 211
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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