Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15e07
         (358 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74030-1|CAA98440.3|  266|Caenorhabditis elegans Hypothetical pr...    27   5.1  
U29244-15|AAC71096.2|  471|Caenorhabditis elegans Hypothetical p...    27   5.1  
AF067619-1|AAC17568.2|  368|Caenorhabditis elegans Hypothetical ...    27   5.1  
Z96100-7|CAB09531.1|  824|Caenorhabditis elegans Hypothetical pr...    26   6.7  
Z81123-2|CAB03365.1|  734|Caenorhabditis elegans Hypothetical pr...    26   6.7  
Z79698-2|CAB01976.1|  824|Caenorhabditis elegans Hypothetical pr...    26   6.7  
Z79698-1|CAL44963.1|  758|Caenorhabditis elegans Hypothetical pr...    26   6.7  
AF068719-4|AAC17780.1|  294|Caenorhabditis elegans Hypothetical ...    26   6.7  
Z81454-4|CAD89725.1|  483|Caenorhabditis elegans Hypothetical pr...    26   8.9  
AC084159-11|ABO16465.1|  449|Caenorhabditis elegans F-box a prot...    26   8.9  

>Z74030-1|CAA98440.3|  266|Caenorhabditis elegans Hypothetical
           protein D1054.1 protein.
          Length = 266

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +2

Query: 236 HCSVLKNQQMMVFLINKCHTRYYLIYCIVMKC 331
           H S+ K ++    +INK  +R +LI C++  C
Sbjct: 127 HISITKLKKWENIMINKFDSRDHLISCLLASC 158


>U29244-15|AAC71096.2|  471|Caenorhabditis elegans Hypothetical
           protein ZK1248.15 protein.
          Length = 471

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -3

Query: 278 SKKPSFAGSSKHCSASLGASKK*NILITTGPNTNEPNL 165
           S   SF     + S++  +S+  N++ TT PN+N P +
Sbjct: 416 SNSESFKPRKTYPSSTYQSSQNGNVVKTTKPNSNRPKI 453


>AF067619-1|AAC17568.2|  368|Caenorhabditis elegans Hypothetical
           protein K03E5.3 protein.
          Length = 368

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 73  DLKNMVHLAEPSDLQLVLNMIKKFXXQ 153
           DLKN++ + EP++  L  N +K F  Q
Sbjct: 127 DLKNLLEMLEPTNSVLPPNYVKSFMWQ 153


>Z96100-7|CAB09531.1|  824|Caenorhabditis elegans Hypothetical
           protein H15N14.2a protein.
          Length = 824

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 325 HDNTVNQVISGMTLVDQKNHHLLV 254
           HD  VNQ++S M  V+Q N+ L++
Sbjct: 424 HDTVVNQLLSKMDGVEQLNNILVI 447


>Z81123-2|CAB03365.1|  734|Caenorhabditis elegans Hypothetical
           protein T14D7.2 protein.
          Length = 734

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +1

Query: 166 RFGSFVFGPVVMRMFHFLDAPKEALQCFEEPANDGFFDQQVS 291
           RFGS V+  ++   F F+ A  E ++ F+    D FF+Q ++
Sbjct: 302 RFGSMVW-TLIGHSFIFVQAYMENVEDFKNSMVDNFFNQWIT 342


>Z79698-2|CAB01976.1|  824|Caenorhabditis elegans Hypothetical
           protein H15N14.2a protein.
          Length = 824

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 325 HDNTVNQVISGMTLVDQKNHHLLV 254
           HD  VNQ++S M  V+Q N+ L++
Sbjct: 424 HDTVVNQLLSKMDGVEQLNNILVI 447


>Z79698-1|CAL44963.1|  758|Caenorhabditis elegans Hypothetical
           protein H15N14.2b protein.
          Length = 758

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 325 HDNTVNQVISGMTLVDQKNHHLLV 254
           HD  VNQ++S M  V+Q N+ L++
Sbjct: 358 HDTVVNQLLSKMDGVEQLNNILVI 381


>AF068719-4|AAC17780.1|  294|Caenorhabditis elegans Hypothetical
           protein H14N18.2 protein.
          Length = 294

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +1

Query: 31  NDFVSDSKNMIFTEDLKNMVHLAEPSDLQLVLNMIKKF 144
           +D +      +F ED   +VH  E SD++  L M KK+
Sbjct: 97  DDDIPPHGEFLFAEDQCVIVHATERSDIKTELKMKKKW 134


>Z81454-4|CAD89725.1|  483|Caenorhabditis elegans Hypothetical
           protein B0391.6 protein.
          Length = 483

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 133 IKKFXXQSTEFRFGSFVFGPVVMR 204
           I+    +S  FR+G F F P+ +R
Sbjct: 414 IRNILIESPHFRYGRFKFSPITIR 437


>AC084159-11|ABO16465.1|  449|Caenorhabditis elegans F-box a protein
           protein 221 protein.
          Length = 449

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 133 IKKFXXQSTEFRFGSFVFGPVVMR 204
           I+    +S  FR+G F F P+ +R
Sbjct: 380 IRNILIESPHFRYGRFKFSPITIR 403


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,856,546
Number of Sequences: 27780
Number of extensions: 144118
Number of successful extensions: 331
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 331
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)