BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15e06
(695 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK128180-1|BAC87313.1| 556|Homo sapiens protein ( Homo sapiens ... 30 6.9
AK125949-1|BAC86357.1| 1014|Homo sapiens protein ( Homo sapiens ... 30 6.9
>AK128180-1|BAC87313.1| 556|Homo sapiens protein ( Homo sapiens
cDNA FLJ46303 fis, clone TESTI4037228. ).
Length = 556
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 118 NKMQFQPLMPCNAPHFAPPSSNLPHNIIGEGD 213
N++ F L+P +P APPSS L N + D
Sbjct: 202 NELSFPQLLPKTSPQSAPPSSPLSPNWVSPSD 233
>AK125949-1|BAC86357.1| 1014|Homo sapiens protein ( Homo sapiens
cDNA FLJ43961 fis, clone TESTI4016812. ).
Length = 1014
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 118 NKMQFQPLMPCNAPHFAPPSSNLPHNIIGEGD 213
N++ F L+P +P APPSS L N + D
Sbjct: 151 NELSFPQLLPKTSPQSAPPSSPLSPNWVSPSD 182
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,813,943
Number of Sequences: 237096
Number of extensions: 2587373
Number of successful extensions: 4326
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4318
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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