Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15d24
(629 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457117-1|CAG33398.1| 251|Homo sapiens MRPL16 protein. 85 3e-16
BC019269-1|AAH19269.1| 251|Homo sapiens mitochondrial ribosomal... 85 3e-16
BC001040-1|AAH01040.1| 251|Homo sapiens mitochondrial ribosomal... 85 3e-16
AK000491-1|BAA91202.1| 251|Homo sapiens protein ( Homo sapiens ... 85 3e-16
AF183428-1|AAG09697.1| 251|Homo sapiens 28.4 kDa protein protein. 85 3e-16
AB049642-1|BAB40847.1| 251|Homo sapiens mitochondrial ribosomal... 85 3e-16
U77494-1|AAB67052.1| 1037|Homo sapiens RANBP8 protein. 30 7.8
>CR457117-1|CAG33398.1| 251|Homo sapiens MRPL16 protein.
Length = 251
Score = 84.6 bits (200), Expect = 3e-16
Identities = 43/114 (37%), Positives = 62/114 (54%)
Frame = +2
Query: 287 AQLTLVAGLKYFPPPKNYDHIEIPERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEV 466
A L AG+K P +++ + IPE+ +LR ++ P P + PK L +RGP
Sbjct: 22 ALLPASAGVKTLLPVPSFEDVSIPEKPKLRFIERAPLVPKVRREPK---NLSDIRGPSTE 78
Query: 467 HTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPIT 628
T + + A GGG + HFEM RL + R +D K MFAIWR+ P++PIT
Sbjct: 79 ATEFTEGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPIT 132
>BC019269-1|AAH19269.1| 251|Homo sapiens mitochondrial ribosomal
protein L16 protein.
Length = 251
Score = 84.6 bits (200), Expect = 3e-16
Identities = 43/114 (37%), Positives = 62/114 (54%)
Frame = +2
Query: 287 AQLTLVAGLKYFPPPKNYDHIEIPERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEV 466
A L AG+K P +++ + IPE+ +LR ++ P P + PK L +RGP
Sbjct: 22 ALLPASAGVKTLLPVPSFEDVSIPEKPKLRFIERAPLVPKVRREPK---NLSDIRGPSTE 78
Query: 467 HTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPIT 628
T + + A GGG + HFEM RL + R +D K MFAIWR+ P++PIT
Sbjct: 79 ATEFTEGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPIT 132
>BC001040-1|AAH01040.1| 251|Homo sapiens mitochondrial ribosomal
protein L16 protein.
Length = 251
Score = 84.6 bits (200), Expect = 3e-16
Identities = 43/114 (37%), Positives = 62/114 (54%)
Frame = +2
Query: 287 AQLTLVAGLKYFPPPKNYDHIEIPERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEV 466
A L AG+K P +++ + IPE+ +LR ++ P P + PK L +RGP
Sbjct: 22 ALLPASAGVKTLLPVPSFEDVSIPEKPKLRFIERAPLVPKVRREPK---NLSDIRGPSTE 78
Query: 467 HTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPIT 628
T + + A GGG + HFEM RL + R +D K MFAIWR+ P++PIT
Sbjct: 79 ATEFTEGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPIT 132
>AK000491-1|BAA91202.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ20484 fis, clone KAT07770. ).
Length = 251
Score = 84.6 bits (200), Expect = 3e-16
Identities = 43/114 (37%), Positives = 62/114 (54%)
Frame = +2
Query: 287 AQLTLVAGLKYFPPPKNYDHIEIPERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEV 466
A L AG+K P +++ + IPE+ +LR ++ P P + PK L +RGP
Sbjct: 22 ALLPASAGVKTLLPVPSFEDVSIPEKPKLRFIERAPLVPKVRREPK---NLSDIRGPSTE 78
Query: 467 HTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPIT 628
T + + A GGG + HFEM RL + R +D K MFAIWR+ P++PIT
Sbjct: 79 ATEFTEGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPIT 132
>AF183428-1|AAG09697.1| 251|Homo sapiens 28.4 kDa protein protein.
Length = 251
Score = 84.6 bits (200), Expect = 3e-16
Identities = 43/114 (37%), Positives = 62/114 (54%)
Frame = +2
Query: 287 AQLTLVAGLKYFPPPKNYDHIEIPERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEV 466
A L AG+K P +++ + IPE+ +LR ++ P P + PK L +RGP
Sbjct: 22 ALLPASAGVKTLLPVPSFEDVSIPEKPKLRFIERAPLVPKVRREPK---NLSDIRGPSTE 78
Query: 467 HTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPIT 628
T + + A GGG + HFEM RL + R +D K MFAIWR+ P++PIT
Sbjct: 79 ATEFTEGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPIT 132
>AB049642-1|BAB40847.1| 251|Homo sapiens mitochondrial ribosomal
protein L16 (L16mt) protein.
Length = 251
Score = 84.6 bits (200), Expect = 3e-16
Identities = 43/114 (37%), Positives = 62/114 (54%)
Frame = +2
Query: 287 AQLTLVAGLKYFPPPKNYDHIEIPERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEV 466
A L AG+K P +++ + IPE+ +LR ++ P P + PK L +RGP
Sbjct: 22 ALLPASAGVKTLLPVPSFEDVSIPEKPKLRFIERAPLVPKVRREPK---NLSDIRGPSTE 78
Query: 467 HTTLQLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPIT 628
T + + A GGG + HFEM RL + R +D K MFAIWR+ P++PIT
Sbjct: 79 ATEFTEGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPIT 132
>U77494-1|AAB67052.1| 1037|Homo sapiens RANBP8 protein.
Length = 1037
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +2
Query: 341 DHIEIPERQRLRVYDK--VPQYPPNLKPP 421
DH+E P RQ +Y K V QY P+ +PP
Sbjct: 46 DHVEFPVRQAAAIYLKNMVTQYWPDREPP 74
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,769,449
Number of Sequences: 237096
Number of extensions: 1941787
Number of successful extensions: 4003
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3994
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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