Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15d24
         (629 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35663-9|CAA84730.1|  219|Caenorhabditis elegans Hypothetical pr...    61   6e-10
Z81106-2|CAB03220.2|  468|Caenorhabditis elegans Hypothetical pr...    31   0.51 
Z81132-11|CAB03426.2|  302|Caenorhabditis elegans Hypothetical p...    30   1.2  
CU457741-8|CAM36349.1|  544|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z68760-2|CAA92995.1|  597|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ...    28   4.8  
Z83116-6|CAB05565.2|  302|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z74473-4|CAA98953.1|  390|Caenorhabditis elegans Hypothetical pr...    27   8.4  

>Z35663-9|CAA84730.1|  219|Caenorhabditis elegans Hypothetical
           protein T04A8.11 protein.
          Length = 219

 Score = 61.3 bits (142), Expect = 6e-10
 Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
 Frame = +2

Query: 311 LKYFPPPKNYDHIEIPERQRLR--VYDKVPQYPPNL--KPPKMQKRLRYMRGPEEVHTTL 478
           +K +  P  Y+++  P   +L+  V    P Y      K  K  KR+   RG EEVHT L
Sbjct: 1   MKKYSFPVTYENVRFPPNGQLKLPVMPAEPFYDAEKGEKKYKSTKRMIEARGVEEVHTEL 60

Query: 479 QLKQYGVRATGGGRMKHEHFEMARLVVARKLDMKRMFAIWRIDPPWQPIT 628
             +QYG+ A  GG +  + F+  +  + + L +   F++WR+D PW P T
Sbjct: 61  IHEQYGLAAVSGGFIDSDDFKFIQDRINKNL-IDNQFSVWRVDAPWLPRT 109


>Z81106-2|CAB03220.2|  468|Caenorhabditis elegans Hypothetical
           protein R06C1.3 protein.
          Length = 468

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = +2

Query: 323 PPPKNYDHIEIPERQRLRVYDKVPQYPPNLKPPKMQKRLRYMRGPEEVHTTLQ 481
           PPP N DH+  P+   L + D     PP   PP +       + P E  +T+Q
Sbjct: 294 PPPVNLDHLPPPDMSILSIDDDDDDLPPP-PPPLLMNTSIVHQLPAEAPSTIQ 345


>Z81132-11|CAB03426.2|  302|Caenorhabditis elegans Hypothetical
           protein T26E4.15 protein.
          Length = 302

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +3

Query: 3   YYLTDNLKNNKVLKTVFKNQSITNYYVL 86
           Y+   N+ +N  +KTVFK+ S+T ++V+
Sbjct: 182 YFKVKNMSDNNSIKTVFKSLSVTVWFVV 209


>CU457741-8|CAM36349.1|  544|Caenorhabditis elegans Hypothetical
           protein C42C1.8 protein.
          Length = 544

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -3

Query: 486 FNCNVVWTSSGPLMYLSLFCILGGFKFGGYCGTLSY 379
           F    +W S  P M L LF I G F   G+CG  +Y
Sbjct: 374 FGVGFLWMSKVPNMSLILFFISGAF---GFCGLAAY 406


>Z68760-2|CAA92995.1|  597|Caenorhabditis elegans Hypothetical
           protein F36H1.3 protein.
          Length = 597

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = +2

Query: 272 LQAEKAQLTLVAGLKYFPPPKNYDHIEIPERQRLRVYDKVPQYPPNLK----PPKMQ 430
           L   +A L L    KY   PK+ D IE  +R    V D V  +PP L+    PPK++
Sbjct: 424 LMLVEAILDLGVAFKYIEDPKSLDAIETYKR---NVADYVEAHPPPLEMFKAPPKVE 477


>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
            protein F39C12.1 protein.
          Length = 5105

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +2

Query: 317  YFPPPKNYDHIEIPERQRLRVYDKVP-QYPPNLKPPKMQKRL 439
            YFP PK  + +++ +R+  R+      +Y P +K PK+QKR+
Sbjct: 2215 YFPNPK-LEKVKLSQRKPSRISSASDSEYCPIVKFPKVQKRV 2255


>Z83116-6|CAB05565.2|  302|Caenorhabditis elegans Hypothetical
           protein M01B2.7 protein.
          Length = 302

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 3   YYLTDNLKNNKVLKTVFKNQSIT 71
           Y+   N+ +N  +KTVFK+ S+T
Sbjct: 182 YFKVKNMSDNNSIKTVFKSLSVT 204


>Z74473-4|CAA98953.1|  390|Caenorhabditis elegans Hypothetical
           protein F56H9.4 protein.
          Length = 390

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 406 WRILWHFIIYPQPLSFGYFNMVIIFWRR 323
           W I+W  +IY  P S    N + IF ++
Sbjct: 97  WAIMWRQLIYENPSSIECLNQIRIFTKQ 124


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,747,851
Number of Sequences: 27780
Number of extensions: 293232
Number of successful extensions: 752
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)