Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15d22
(534 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical ... 104 3e-23
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 31 0.39
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 31 0.52
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 31 0.52
Z46996-1|CAA87099.1| 472|Caenorhabditis elegans Hypothetical pr... 30 0.91
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 30 0.91
Z81114-4|CAB03288.2| 688|Caenorhabditis elegans Hypothetical pr... 30 1.2
U23139-6|AAK31489.2| 520|Caenorhabditis elegans Hypothetical pr... 30 1.2
AY652944-1|AAT73711.1| 688|Caenorhabditis elegans guanylate cyc... 30 1.2
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 29 1.6
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr... 29 1.6
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 29 2.1
U50193-8|AAL11478.2| 394|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z68213-1|CAA92435.2| 487|Caenorhabditis elegans Hypothetical pr... 28 3.7
U39850-5|AAM45368.1| 670|Caenorhabditis elegans Polyq (poly glu... 28 4.8
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 28 4.8
AY572975-1|AAT77228.1| 580|Caenorhabditis elegans KQT-3 potassi... 28 4.8
AL032648-2|CAA21699.2| 621|Caenorhabditis elegans Hypothetical ... 28 4.8
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical p... 27 6.4
Z22176-12|CAO82057.1| 546|Caenorhabditis elegans Hypothetical p... 27 6.4
Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical p... 27 6.4
Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical pr... 27 6.4
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 27 6.4
AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein. 27 6.4
U88178-4|AAC24411.1| 460|Caenorhabditis elegans Hypothetical pr... 27 8.5
AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical ... 27 8.5
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 27 8.5
>AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical
protein Y48G1A.4 protein.
Length = 813
Score = 104 bits (250), Expect = 3e-23
Identities = 53/129 (41%), Positives = 77/129 (59%), Gaps = 5/129 (3%)
Frame = +2
Query: 161 KKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAKAVQKRKETLGTEMKLMNKTNTFID 340
++K NPFE+ N+ K +LG+K G P SR +A ++R++TLG E NK + +D
Sbjct: 9 QRKTNPFELKFNKSKHDILGRKKGAQVGAPTASRKRAHEQREQTLGVEYDRKNKISKIVD 68
Query: 341 RRIGEKNNQLSAEDKMIARFAAERVKQHNKKSIYNLADD-----EILTHRGXTLEQIEKF 505
+R+GEK+ + S E+K RF ERVK + + S +NL DD E+LTH+G L IEK+
Sbjct: 69 KRLGEKDGK-SEEEKGAMRFTEERVKNYKRASKFNLTDDGDEEEEVLTHKGKALSDIEKY 127
Query: 506 DDPRSDDED 532
D D D
Sbjct: 128 DKSMISDSD 136
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.39
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = +2
Query: 65 SVYK*IKMAK--VKNKRNSGLADKVHSNRKAEINKKKINPFEVHVNREKIKVLGK-KSKH 235
S+ + IK A+ VKN S D ++ RKAE KI + E++K GK K K
Sbjct: 672 SILEKIKEAREEVKNVIRSDYTDCLNKVRKAEDTLAKIEN-KYKKESEEVKKTGKNKDKV 730
Query: 236 DKGLPGVSRAK-AVQKRKETLGTEMKLMNKTNTFIDR 343
+K V +AK QK KE E++ + K +++
Sbjct: 731 EKTKEEVEKAKEEFQKVKEEFQKEVEKVKKVEKELEK 767
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 31.1 bits (67), Expect = 0.52
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 125 DKVHSNRKAEINKKKINPFEVHVNREKIKVLGKKSK-HDKGLPGVSRAKAVQKRKETLG 298
DKV +NR+ E++ KKI+P R + K++ K K GL S + +++ ET G
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYG 158
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 31.1 bits (67), Expect = 0.52
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 125 DKVHSNRKAEINKKKINPFEVHVNREKIKVLGKKSK-HDKGLPGVSRAKAVQKRKETLG 298
DKV +NR+ E++ KKI+P R + K++ K K GL S + +++ ET G
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYG 158
>Z46996-1|CAA87099.1| 472|Caenorhabditis elegans Hypothetical
protein C34C12.1 protein.
Length = 472
Score = 30.3 bits (65), Expect = 0.91
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 149 AEINKKKINPFEVHVNREKIKVLGKKSKH-DKGLPGVSRAKAVQKRKETLGTEMKLMNKT 325
AEI KKI + EK+ L K K + L + ++ +++ K L TE + +
Sbjct: 43 AEIKLKKIRNKLNGEHSEKLGKLNDKYKAVQEELKTMKQSSQLKREKGVLETENRRLETA 102
Query: 326 NTFIDRRIGEKNNQLSAED 382
+ +DR++ KN++L D
Sbjct: 103 KSELDRQLLGKNDELRMAD 121
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 30.3 bits (65), Expect = 0.91
Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 3/153 (1%)
Frame = +2
Query: 83 KMAKVKNKRNSGLADKVHSNRKAEINK---KKINPFEVHVNREKIKVLGKKSKHDKGLPG 253
K VK+ A K S KA K KK E E+ K KKS+ K
Sbjct: 27 KAGAVKSSTAPAPAPKADSKMKAPEEKEKSKKSEKKEEPKKEEEKKEKSKKSEGKKSDKK 86
Query: 254 VSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKK 433
+ + ++ KE E K K + D + EK ++ + K + E+ K +KK
Sbjct: 87 EEKKEEKKEEKEDKKEEKKEEKKEDDKKDEKKDEKKDEKEEDKKSEDKKEDEKEKDDDKK 146
Query: 434 SIYNLADDEILTHRGXTLEQIEKFDDPRSDDED 532
+ DD+ ++ + EK ++ + D E+
Sbjct: 147 E--DKKDDKKSDNKDD--KDDEKKEEKKDDKEE 175
>Z81114-4|CAB03288.2| 688|Caenorhabditis elegans Hypothetical
protein T04D3.4 protein.
Length = 688
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 95 VKNKRNS-GLADKVHSNRKAEINKKKINPFEVHVNREKIKVLGK 223
V NK S G+ K+H + ++N K NP V ++R ++ GK
Sbjct: 547 VANKMESNGIQCKIHVSETGKLNGLKANPSYVFIDRGNTEIRGK 590
>U23139-6|AAK31489.2| 520|Caenorhabditis elegans Hypothetical
protein F13H8.8 protein.
Length = 520
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 131 VHSNRKAEINKKKINPFEVHVN-REKIKVLGKKSKHDKGLPGVSRAKAVQKRKETLGT 301
VH+ R++E+ KKK++ FE+ ++ E+ K+ + K L S V RKE T
Sbjct: 417 VHAYRRSEVGKKKVDDFEMKISTAEEKKLSCEAPKVSFQLADKSLQLNVYNRKERPNT 474
>AY652944-1|AAT73711.1| 688|Caenorhabditis elegans guanylate
cyclase-like protein protein.
Length = 688
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 95 VKNKRNS-GLADKVHSNRKAEINKKKINPFEVHVNREKIKVLGK 223
V NK S G+ K+H + ++N K NP V ++R ++ GK
Sbjct: 547 VANKMESNGIQCKIHVSETGKLNGLKANPSYVFIDRGNTEIRGK 590
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 29.5 bits (63), Expect = 1.6
Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = +2
Query: 128 KVHSNRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGV-SRAKAVQKRKETLGTE 304
K H + AE NK+ FE R + +V ++H K + + + +K+ E L +
Sbjct: 559 KTHETQIAEKNKEFERNFEEERARREAEVCAMNNRHQKVVACLDEKISEAEKQCEQLNVD 618
Query: 305 MKLMNKT-NTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKKSIYNLADDEI 463
K++ D R ++S+ + +AE + K +L DEI
Sbjct: 619 KKVLQAALANDCDHRNQMLTKEISSLQTALEMKSAEMKELRQKNQNLSLQVDEI 672
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 29.5 bits (63), Expect = 1.6
Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = +2
Query: 128 KVHSNRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGV-SRAKAVQKRKETLGTE 304
K H + AE NK+ FE R + +V ++H K + + + +K+ E L +
Sbjct: 627 KTHETQIAEKNKEFERNFEEERARREAEVCAMNNRHQKVVACLDEKISEAEKQCEQLNVD 686
Query: 305 MKLMNKT-NTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKKSIYNLADDEI 463
K++ D R ++S+ + +AE + K +L DEI
Sbjct: 687 KKVLQAALANDCDHRNQMLTKEISSLQTALEMKSAEMKELRQKNQNLSLQVDEI 740
>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical protein
C16A3.3 protein.
Length = 1743
Score = 29.5 bits (63), Expect = 1.6
Identities = 23/104 (22%), Positives = 47/104 (45%)
Frame = +2
Query: 221 KKSKHDKGLPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIARF 400
+ S +G+P ++ KET+ E + +N G +N L+A K+ +
Sbjct: 1367 RTSSKSEGVPSKVALLEEERSKETVEAEDPGFDWSNK------GFRNEDLAAVGKLTLKD 1420
Query: 401 AAERVKQHNKKSIYNLADDEILTHRGXTLEQIEKFDDPRSDDED 532
A E ++ ++ + D+E+ E+++ +D SDDE+
Sbjct: 1421 AEEESEEEEEEDEEEVEDEEVDEDASDEEEEVDGEED-ESDDEE 1463
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 29.1 bits (62), Expect = 2.1
Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 9/135 (6%)
Frame = +2
Query: 83 KMAKVKNKR--NSGLADKVHSNRKAE-----INKKKINPFEVHVNREKIKVLGKKSKH-D 238
KM K +R +D + +R+AE + K+K E +V ++ +H +
Sbjct: 255 KMKKEDRERATQKDRSDHIERHRQAEARAEALEKEKREQEEKQKKENLERVEKERREHIE 314
Query: 239 KGLPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIG-EKNNQLSAEDKMIARFAAERV 415
+ +RAKA++K K L + K N +RR E++ Q A K + + E
Sbjct: 315 RHRQAEARAKALEKEKRELEEKQKKENLERVEKERREHIERHRQAEARAKALEKEKRELE 374
Query: 416 KQHNKKSIYNLADDE 460
++ K+++ E
Sbjct: 375 EKQKKENLERATQKE 389
>U50193-8|AAL11478.2| 394|Caenorhabditis elegans Hypothetical
protein ZK328.6 protein.
Length = 394
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/64 (21%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 200 EKIKVLGKKSKHDKGLPGVSRAKAVQKRKET-LGTEMKLMNKTNTFIDRRIGEKNNQLSA 376
+ I++ + H G+P + K ++K+KET + TE ++ K + +++ +K ++
Sbjct: 287 KSIQMTASQGTHVDGVPPTKKKKVIRKKKETEVVTEEGVLPKPKKKVVKKVVKKKKPIAF 346
Query: 377 EDKM 388
K+
Sbjct: 347 IKKL 350
>Z68213-1|CAA92435.2| 487|Caenorhabditis elegans Hypothetical
protein C01F6.2 protein.
Length = 487
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +2
Query: 338 DRRIGEKNNQLSA---EDKMIARFAAERVKQHNKKSIYNLADDEI 463
D IGEK +++ +DK + E++K+ KKS + DE+
Sbjct: 179 DHCIGEKGKKINGSLEKDKKVKESGKEKIKKETKKSPQTMTLDEV 223
>U39850-5|AAM45368.1| 670|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform c
protein.
Length = 670
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/55 (21%), Positives = 28/55 (50%)
Frame = +2
Query: 104 KRNSGLADKVHSNRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAK 268
K+++ ++ ++ +NK+ + V N + + + K+ H +PG SR+K
Sbjct: 96 KKDAKSSENRAKEKQKPMNKRPTSSASVDSNDDGVHIPAKRMAHASSVPGPSRSK 150
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/55 (21%), Positives = 28/55 (50%)
Frame = +2
Query: 104 KRNSGLADKVHSNRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAK 268
K+++ ++ ++ +NK+ + V N + + + K+ H +PG SR+K
Sbjct: 1073 KKDAKSSENRAKEKQKPMNKRPTSSASVDSNDDGVHIPAKRMAHASSVPGPSRSK 1127
>AY572975-1|AAT77228.1| 580|Caenorhabditis elegans KQT-3 potassium
channel protein.
Length = 580
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +2
Query: 188 HVNRE-KIKVLGKKSKHDKGLPGVSRAKAVQK-RKETLGTEMKLMNKTNTFIDRRIGEKN 361
H+N +IK L ++ G PG K +K T+G+ + + + +DR++ N
Sbjct: 463 HLNMMVRIKELQRRLDQTLGKPGQYDGKGSRKGHPVTIGSRLSRLELQMSSLDRKVESSN 522
Query: 362 NQLSAEDKMIA 394
L+A +++A
Sbjct: 523 RTLNALYRLMA 533
>AL032648-2|CAA21699.2| 621|Caenorhabditis elegans Hypothetical
protein Y54G9A.3 protein.
Length = 621
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +2
Query: 188 HVNRE-KIKVLGKKSKHDKGLPGVSRAKAVQK-RKETLGTEMKLMNKTNTFIDRRIGEKN 361
H+N +IK L ++ G PG K +K T+G+ + + + +DR++ N
Sbjct: 504 HLNMMVRIKELQRRLDQTLGKPGQYDGKGSRKGHPVTIGSRLSRLELQMSSLDRKVESSN 563
Query: 362 NQLSAEDKMIA 394
L+A +++A
Sbjct: 564 RTLNALYRLMA 574
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 27.5 bits (58), Expect = 6.4
Identities = 22/96 (22%), Positives = 40/96 (41%)
Frame = +2
Query: 146 KAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAKAVQKRKETLGTEMKLMNKT 325
KAE++ K++ E +EK K +K K + L R++ +K +E + K K
Sbjct: 174 KAEMDAKRVAEEEEERRKEKEKRREEKKKQKELLKEKERSERKEKERELEREKEKSREKE 233
Query: 326 NTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKK 433
+ EK + E + E+ ++ KK
Sbjct: 234 REKEREKEREKEREKEREKQKEREKEREKEREKEKK 269
>Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical
protein ZK1098.10d protein.
Length = 1185
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 242 GLPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKN 361
G+PG S+ + + TL M +M+ + +ID RIGE+N
Sbjct: 1116 GVPGASKNGEDESAEVTL-RRMLIMSGGDGYIDFRIGEEN 1154
>Z22176-12|CAO82057.1| 546|Caenorhabditis elegans Hypothetical
protein ZK1098.10c protein.
Length = 546
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 242 GLPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKN 361
G+PG S+ + + TL M +M+ + +ID RIGE+N
Sbjct: 477 GVPGASKNGEDESAEVTL-RRMLIMSGGDGYIDFRIGEEN 515
>Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical
protein ZK1098.10b protein.
Length = 1157
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 242 GLPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKN 361
G+PG S+ + + TL M +M+ + +ID RIGE+N
Sbjct: 1088 GVPGASKNGEDESAEVTL-RRMLIMSGGDGYIDFRIGEEN 1126
>Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical protein
ZK1098.10a protein.
Length = 1139
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 242 GLPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKN 361
G+PG S+ + + TL M +M+ + +ID RIGE+N
Sbjct: 1070 GVPGASKNGEDESAEVTL-RRMLIMSGGDGYIDFRIGEEN 1108
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 27.5 bits (58), Expect = 6.4
Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Frame = +2
Query: 92 KVKNKRNSGLADKVHSNRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAKA 271
KV+ +RN KAE K KI +V +KIK ++ + ++ AK
Sbjct: 952 KVEKERNKEKVKAEEERLKAEEEKVKIEKEKVKAEEQKIKAAEEERRKER----AEDAKK 1007
Query: 272 VQKRKETLG-TEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIARFAAERVKQ 421
V++ +E + K+ K + RR K ++ E + + E+ K+
Sbjct: 1008 VKEGQEKIAILNAKVQEKEDKSEARR---KQKEMDNEAEKLLNVEKEKEKR 1055
>AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein.
Length = 1157
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 242 GLPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKN 361
G+PG S+ + + TL M +M+ + +ID RIGE+N
Sbjct: 1088 GVPGASKNGEDESAEVTL-RRMLIMSGGDGYIDFRIGEEN 1126
>U88178-4|AAC24411.1| 460|Caenorhabditis elegans Hypothetical
protein W09C3.2 protein.
Length = 460
Score = 27.1 bits (57), Expect = 8.5
Identities = 21/96 (21%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Frame = +2
Query: 80 IKMAKVKNKRNSGLADKVHSNRKAEINKKKINPFEVHVNRE--KIKVLGKKSKHDKGLPG 253
+K K K K DK+ ++K++ +K+K + N + K + L KK K D G
Sbjct: 54 LKSFKSKKKLRKVNGDKIKKSKKSKKSKRKEVTVDKEDNEDEKKDENLEKKLKKDDG--- 110
Query: 254 VSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKN 361
S + V+ ++++ + + ++ ++++ +KN
Sbjct: 111 -SSREKVEDQEQSRKIDRSIKDRNPKSLEQKSHQKN 145
>AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical
protein Y47H9C.9 protein.
Length = 829
Score = 27.1 bits (57), Expect = 8.5
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +2
Query: 149 AEINKKKINPFEVHVNREKIKVLGKKSKH-DKGLPGVSRAKAVQKR-KETLGTEMKLMNK 322
AEI KKI + EK+ L K K + L + ++ KR K L TE + +
Sbjct: 37 AEIKLKKIRDKLNGEHSEKLGKLNDKYKAVQEELKTMKQSWTQLKREKGVLETENRRLET 96
Query: 323 TNTFIDRRIGEKNNQLSAED 382
+DR++ KN++L D
Sbjct: 97 AKRELDRQLSGKNDELRMAD 116
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 194 NREKIKVLGKKSKHDKGLPGVSRAKAVQK 280
N EK+KV KK++ +K +S A VQK
Sbjct: 510 NAEKVKVQEKKNQSEKNGNKISNASEVQK 538
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,035,831
Number of Sequences: 27780
Number of extensions: 210825
Number of successful extensions: 618
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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