Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15c20
(582 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M84605-1|AAA36395.1| 440|Homo sapiens putative opioid receptor ... 31 3.9
AK024684-1|BAB14960.1| 126|Homo sapiens protein ( Homo sapiens ... 31 3.9
BC067234-1|AAH67234.1| 171|Homo sapiens BPTF protein protein. 30 6.8
BC050566-1|AAH50566.1| 240|Homo sapiens BPTF protein protein. 30 6.8
AY282495-1|AAP22284.1| 2764|Homo sapiens bromodomain PHD finger ... 30 6.8
AL627071-3|CAI40156.1| 619|Homo sapiens solute carrier family 7... 30 6.8
AK075014-1|BAC11353.1| 619|Homo sapiens protein ( Homo sapiens ... 30 6.8
AK074865-1|BAC11253.1| 619|Homo sapiens protein ( Homo sapiens ... 30 6.8
AK027447-1|BAB55118.1| 415|Homo sapiens protein ( Homo sapiens ... 30 6.8
AF320612-1|AAL37184.1| 619|Homo sapiens cationic amino acid tra... 30 6.8
AB032251-1|BAA89208.1| 2781|Homo sapiens bromodomain PHD finger ... 30 6.8
>M84605-1|AAA36395.1| 440|Homo sapiens putative opioid receptor
protein.
Length = 440
Score = 30.7 bits (66), Expect = 3.9
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = -3
Query: 412 VLGVVVLIWMAHVELQLRMVSSSTLQPPSFASPSLPSISLIVAFSF 275
VLG +V+IW+ ++R V++S L +FA ++ +++ +V F +
Sbjct: 75 VLGNLVVIWIVLAHKRMRTVTNSFLVNLAFADAAMAALNALVNFIY 120
>AK024684-1|BAB14960.1| 126|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21031 fis, clone CAE07336. ).
Length = 126
Score = 30.7 bits (66), Expect = 3.9
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -3
Query: 352 SSSTLQPPSFASPSLPSISLIVAFSFXXXXXXX*AVQQDCHISPTF*CYQ 203
++STL+P F+ + PS+SL SF CH+S F C++
Sbjct: 10 ATSTLRPDQFSPHTNPSLSLPCLKSFPVSLWPWGRASLLCHLSRLFVCHR 59
>BC067234-1|AAH67234.1| 171|Homo sapiens BPTF protein protein.
Length = 171
Score = 29.9 bits (64), Expect = 6.8
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 115 PMQFVSVAAGVQRRLQNNIRERKSNRLSIFDSIRKLEKCDSPVVQ 249
PM ++ VQRR + E ++ IFD+ R DSP Q
Sbjct: 96 PMDLATMEERVQRRYYEKLTEFVADMTKIFDNCRYYNPSDSPFYQ 140
>BC050566-1|AAH50566.1| 240|Homo sapiens BPTF protein protein.
Length = 240
Score = 29.9 bits (64), Expect = 6.8
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 115 PMQFVSVAAGVQRRLQNNIRERKSNRLSIFDSIRKLEKCDSPVVQ 249
PM ++ VQRR + E ++ IFD+ R DSP Q
Sbjct: 165 PMDLATMEERVQRRYYEKLTEFVADMTKIFDNCRYYNPSDSPFYQ 209
>AY282495-1|AAP22284.1| 2764|Homo sapiens bromodomain PHD finger
transcription factor protein.
Length = 2764
Score = 29.9 bits (64), Expect = 6.8
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 115 PMQFVSVAAGVQRRLQNNIRERKSNRLSIFDSIRKLEKCDSPVVQ 249
PM ++ VQRR + E ++ IFD+ R DSP Q
Sbjct: 2689 PMDLATMEERVQRRYYEKLTEFVADMTKIFDNCRYYNPSDSPFYQ 2733
>AL627071-3|CAI40156.1| 619|Homo sapiens solute carrier family 7
(cationic amino acid transporter, y+ system), member 3
protein.
Length = 619
Score = 29.9 bits (64), Expect = 6.8
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = -3
Query: 478 SSDLLYSWLTVIV*PCLMYLALVLGVVVLIWMAHVELQLRMVSSSTLQPPSFASPSLPSI 299
S DLL W V+V + L L++G++V+IW R SST P F P+LP +
Sbjct: 504 SGDLL--WTAVVV----LLLLLIIGIIVVIW--------RQPQSST--PLHFKVPALPLL 547
Query: 298 SLIVAF 281
L+ F
Sbjct: 548 PLMSIF 553
>AK075014-1|BAC11353.1| 619|Homo sapiens protein ( Homo sapiens
cDNA FLJ90533 fis, clone NT2RP4002750, moderately
similar to Mus musculus cationic amino acid transporter
(CAT3) mRNA. ).
Length = 619
Score = 29.9 bits (64), Expect = 6.8
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = -3
Query: 478 SSDLLYSWLTVIV*PCLMYLALVLGVVVLIWMAHVELQLRMVSSSTLQPPSFASPSLPSI 299
S DLL W V+V + L L++G++V+IW R SST P F P+LP +
Sbjct: 504 SGDLL--WTAVVV----LLLLLIIGIIVVIW--------RQPQSST--PLHFKVPALPLL 547
Query: 298 SLIVAF 281
L+ F
Sbjct: 548 PLMSIF 553
>AK074865-1|BAC11253.1| 619|Homo sapiens protein ( Homo sapiens
cDNA FLJ90384 fis, clone NT2RP2005181, highly similar to
Solute carrier family 7 (cationic amino acid
transporter, y+ ).
Length = 619
Score = 29.9 bits (64), Expect = 6.8
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = -3
Query: 478 SSDLLYSWLTVIV*PCLMYLALVLGVVVLIWMAHVELQLRMVSSSTLQPPSFASPSLPSI 299
S DLL W V+V + L L++G++V+IW R SST P F P+LP +
Sbjct: 504 SGDLL--WTAVVV----LLLLLIIGIIVVIW--------RQPQSST--PLHFKVPALPLL 547
Query: 298 SLIVAF 281
L+ F
Sbjct: 548 PLMSIF 553
>AK027447-1|BAB55118.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ14541 fis, clone NT2RM2001499, moderately
similar to LOW-AFFINITY CATIONIC AMINO ACID
TRANSPORTER-2. ).
Length = 415
Score = 29.9 bits (64), Expect = 6.8
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = -3
Query: 478 SSDLLYSWLTVIV*PCLMYLALVLGVVVLIWMAHVELQLRMVSSSTLQPPSFASPSLPSI 299
S DLL W V+V + L L++G++V+IW R SST P F P+LP +
Sbjct: 300 SGDLL--WTAVVV----LLLLLIIGIIVVIW--------RQPQSST--PLHFKVPALPLL 343
Query: 298 SLIVAF 281
L+ F
Sbjct: 344 PLMSIF 349
>AF320612-1|AAL37184.1| 619|Homo sapiens cationic amino acid
transporter protein.
Length = 619
Score = 29.9 bits (64), Expect = 6.8
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = -3
Query: 478 SSDLLYSWLTVIV*PCLMYLALVLGVVVLIWMAHVELQLRMVSSSTLQPPSFASPSLPSI 299
S DLL W V+V + L L++G++V+IW R SST P F P+LP +
Sbjct: 504 SGDLL--WTAVVV----LLLLLIIGIIVVIW--------RQPQSST--PLHFKVPALPLL 547
Query: 298 SLIVAF 281
L+ F
Sbjct: 548 PLMSIF 553
>AB032251-1|BAA89208.1| 2781|Homo sapiens bromodomain PHD finger
transcription factor protein.
Length = 2781
Score = 29.9 bits (64), Expect = 6.8
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 115 PMQFVSVAAGVQRRLQNNIRERKSNRLSIFDSIRKLEKCDSPVVQ 249
PM ++ VQRR + E ++ IFD+ R DSP Q
Sbjct: 2706 PMDLATMEERVQRRYYEKLTEFVADMTKIFDNCRYYNPSDSPFYQ 2750
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,337,601
Number of Sequences: 237096
Number of extensions: 1113726
Number of successful extensions: 7223
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7221
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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