Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15c14
         (707 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128040-1|BAC87244.1|  245|Homo sapiens protein ( Homo sapiens ...    85   3e-16
BC139737-1|AAI39738.1|  263|Homo sapiens transmembrane protein 5...    40   0.007
AK056404-1|BAB71177.1|  263|Homo sapiens protein ( Homo sapiens ...    40   0.007
BC015232-1|AAH15232.2|  148|Homo sapiens transmembrane protein 1...    37   0.081
AY358726-1|AAQ89088.1|  246|Homo sapiens GPQH2552 protein.             31   4.0  
AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens ...    30   7.1  

>AK128040-1|BAC87244.1|  245|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46159 fis, clone TESTI4002072. ).
          Length = 245

 Score = 84.6 bits (200), Expect = 3e-16
 Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 2/171 (1%)
 Frame = +3

Query: 132 LISFVTWSWLYLWFAR-DGNKSPEWCSRAVTLLHGSVATVVGLYQCGAEAITP-CRLTMK 305
           L S   W  LY+ F   + ++S EW  R VT  HG ++  +  Y    +   P       
Sbjct: 10  LCSLCGWLSLYISFCHLNKHRSYEWSCRLVTFTHGVLSIGLSAYIGFIDGPWPFTHPGSP 69

Query: 306 TTPWHYALMLWSWGYFAFDLLWCFVYWGDHYLMLVHHTSALVAVTVYTQKDYTGCTFACT 485
            TP    ++  + GYF FDL WC  +  +  L+L HHT +++ + +      +G      
Sbjct: 70  NTPLQVHVLCLTLGYFIFDLGWCVYFQSEGALILAHHTLSILGIIMALVLGESGTEVNAV 129

Query: 486 LAFLEVTNPLLQLRWFLKSNGYAKTVLYTMVEVTYLVTFLFVRGILGTYIM 638
           L   E+TNPLLQ+RWFL+  G+  +    +V+  ++  F  VR  +G  ++
Sbjct: 130 LFGSELTNPLLQMRWFLRETGHYHSFTGDVVDFLFVALFTGVRIGVGACLL 180


>BC139737-1|AAI39738.1|  263|Homo sapiens transmembrane protein 56
           protein.
          Length = 263

 Score = 40.3 bits (90), Expect = 0.007
 Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 4/146 (2%)
 Frame = +3

Query: 189 KSPEWCSRAVTLLHGSVATVVGLYQCGAEAITPCRLTMKTTPWHYALMLWSWGYFAFDLL 368
           K  EW SR V+  H  V  + GLY    +  T               +  + GY   DL 
Sbjct: 45  KKIEWNSRVVSTCHSLVVGIFGLYIFLFDEATKADPLWGGPSLANVNIAIASGYLISDLS 104

Query: 369 WCFVYW---GDHYLMLVHHTSALVAVTVYTQKDYTGCTFACTLAFLEVTNPLLQLRWFLK 539
              +YW   GD +  ++HH ++L A  +  +           L   E+++P +  RWF +
Sbjct: 105 IIILYWKVIGDKF-FIMHHCASLYAYYLVLKNGVLAYIGNFRL-LAELSSPFVNQRWFFE 162

Query: 540 SNGYAKTVLYTMVE-VTYLVTFLFVR 614
           +  Y K     ++  +   V F  VR
Sbjct: 163 ALKYPKFSKAIVINGILMTVVFFIVR 188


>AK056404-1|BAB71177.1|  263|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31842 fis, clone NT2RP7000259. ).
          Length = 263

 Score = 40.3 bits (90), Expect = 0.007
 Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 4/146 (2%)
 Frame = +3

Query: 189 KSPEWCSRAVTLLHGSVATVVGLYQCGAEAITPCRLTMKTTPWHYALMLWSWGYFAFDLL 368
           K  EW SR V+  H  V  + GLY    +  T               +  + GY   DL 
Sbjct: 45  KKIEWNSRVVSTCHSLVVGIFGLYIFLFDEATKADPLWGGPSLANVNIAIASGYLISDLS 104

Query: 369 WCFVYW---GDHYLMLVHHTSALVAVTVYTQKDYTGCTFACTLAFLEVTNPLLQLRWFLK 539
              +YW   GD +  ++HH ++L A  +  +           L   E+++P +  RWF +
Sbjct: 105 IIILYWKVIGDKF-FIMHHCASLYAYYLVLKNGVLAYIGNFRL-LAELSSPFVNQRWFFE 162

Query: 540 SNGYAKTVLYTMVE-VTYLVTFLFVR 614
           +  Y K     ++  +   V F  VR
Sbjct: 163 ALKYPKFSKAIVINGILMTVVFFIVR 188


>BC015232-1|AAH15232.2|  148|Homo sapiens transmembrane protein 136
           protein.
          Length = 148

 Score = 36.7 bits (81), Expect = 0.081
 Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
 Frame = +3

Query: 132 LISFVTWSWLYLWFAR-DGNKSPEWCSRAVTLLHGSVATVVGLYQCGAEAITP-CRLTMK 305
           L S   W  LY+ F   + ++S EW  R VT  HG ++  +  Y    +   P       
Sbjct: 32  LCSLCGWLSLYISFCHLNKHRSYEWSCRLVTFTHGVLSIGLSAYIGFIDGPWPFTHPGSP 91

Query: 306 TTPWHYALMLWSWGYFAFDL--LWCFVY 383
            TP    ++  + GYF FDL  +W F +
Sbjct: 92  NTPLQVHVLCLTLGYFIFDLGCIWRFAW 119


>AY358726-1|AAQ89088.1|  246|Homo sapiens GPQH2552 protein.
          Length = 246

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = +3

Query: 111 STASLLKLISFVTWSWLYLWFARDGNKSPEWCSRAVTLLH-GSVATVVGLYQCGAEAITP 287
           +TAS  + ++F  W WL +       K  E C   +  +  G+   VVG   C + +  P
Sbjct: 32  ATASRFRAVAFHNWKWLLM--RNMVCKLQEGCEETLVFIETGTARGVVGFKGCSSSSSYP 89

Query: 288 CRLTMKTTP 314
            +++   +P
Sbjct: 90  AQISYLVSP 98


>AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26336 fis, clone HRT02842. ).
          Length = 236

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +3

Query: 318 HYALMLWSWGYFAFDLLWC-FVYWGDHYLMLVH-HTSALVAVTVYTQKDYTGCTFACTLA 491
           H    ++ + Y    +  C F+Y   H  M +H H  A + V  YT+     C F CT A
Sbjct: 52  HAYAYIYVYSYTRICIHICIFIYTHMHTYMYIHIHAYAYIYVYSYTRICIHICVFICTHA 111

Query: 492 FLEV 503
           ++ V
Sbjct: 112 YIYV 115


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,375,282
Number of Sequences: 237096
Number of extensions: 2351009
Number of successful extensions: 8943
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8939
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)