Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15c14
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61955-7|AAV58862.1| 456|Caenorhabditis elegans Hypothetical pr... 32 0.35
U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical pr... 32 0.35
AL021448-2|CAA16277.2| 339|Caenorhabditis elegans Hypothetical ... 32 0.46
AC025721-12|AAK29899.1| 278|Caenorhabditis elegans Hypothetical... 31 0.81
U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical pr... 28 5.7
U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical pr... 28 5.7
U29613-2|AAC47061.1| 111|Caenorhabditis elegans Hypothetical pr... 27 9.9
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 27 9.9
>U61955-7|AAV58862.1| 456|Caenorhabditis elegans Hypothetical
protein M03D4.4b protein.
Length = 456
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +2
Query: 449 TKRLYRLHVCLHAGVFRSHQSPTATTMVFKKQWLCQNRSLHYGGGDISCDVPVCER 616
T++L + H H G RSH P F+K L Q+ +H GG C P C +
Sbjct: 78 TRQLLKKHWMWHTGE-RSHVCPHCNKAFFQKGHLTQHLMIHSGGRPHEC--PQCHK 130
>U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical
protein M03D4.4a protein.
Length = 505
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +2
Query: 449 TKRLYRLHVCLHAGVFRSHQSPTATTMVFKKQWLCQNRSLHYGGGDISCDVPVCER 616
T++L + H H G RSH P F+K L Q+ +H GG C P C +
Sbjct: 127 TRQLLKKHWMWHTGE-RSHVCPHCNKAFFQKGHLTQHLMIHSGGRPHEC--PQCHK 179
>AL021448-2|CAA16277.2| 339|Caenorhabditis elegans Hypothetical
protein Y2H9A.2 protein.
Length = 339
Score = 31.9 bits (69), Expect = 0.46
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Frame = +3
Query: 381 YWGDHYLMLVHHTSALVAVTVYTQKDYTGCTFACTLAFLEVTNPLLQLRWFLKSNGYAKT 560
Y+ HY L + + + + G TF + A LE+ PL + +WF + N A+T
Sbjct: 114 YYILHYSALTRLKLVKIVLLILIPSLFQGLTFWTSFAPLEIILPLAK-KWFPQYNFEAET 172
Query: 561 -VLYTMVEVTY----LVTFLFVRGILGTYIMMRILKSDI 662
VL +V++T+ F I YI + IL+ I
Sbjct: 173 GVLTGIVDITHWAATYAVFNICLPIFPIYIAIFILRQKI 211
>AC025721-12|AAK29899.1| 278|Caenorhabditis elegans Hypothetical
protein Y48G8AL.13 protein.
Length = 278
Score = 31.1 bits (67), Expect = 0.81
Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 15/173 (8%)
Frame = +3
Query: 189 KSPEWCSRAVTLLHGSVAT----VVGLYQCGAEAITPCRLTMKTTPWHYA----LMLWSW 344
K PEW L V + +V C +T + +H A + L+S
Sbjct: 28 KQPEWSDNKTRLFAVRVVSFTHALVSALGCIFSLLTDVNYVREPYDYHKANAEYVFLFSM 87
Query: 345 GYFAFDLLWCFVY--WGDHYLMLVHHTSALVAVTVYTQKDYTGCTFACTLAFL--EVTNP 512
GYF +DLL ++ L+HH+ + A ++ +G F + L E+
Sbjct: 88 GYFIYDLLDMHIHGELESSKEYLIHHSLVITAFSIIL---LSGRLFGLAMIALLVEIQTV 144
Query: 513 LLQLRWFLK---SNGYAKTVLYTMVEVTYLVTFLFVRGILGTYIMMRILKSDI 662
L LR ++ + + + ++ + FLF R + Y++ ++ D+
Sbjct: 145 FLHLRTMVRLLYGSKHMPASIDVLINANMICLFLF-RHLPVCYLLFYLIAQDV 196
>U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical
protein F45E4.3b protein.
Length = 836
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 212 GSDP-PARKRCYSRRFISMRSRSYNAMPTYHED 307
GS P +R+R SRR+ + + YN MP H D
Sbjct: 363 GSIPRSSRERTASRRYREQQQQIYNQMPQNHND 395
>U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical
protein F45E4.3a protein.
Length = 1231
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 212 GSDP-PARKRCYSRRFISMRSRSYNAMPTYHED 307
GS P +R+R SRR+ + + YN MP H D
Sbjct: 363 GSIPRSSRERTASRRYREQQQQIYNQMPQNHND 395
>U29613-2|AAC47061.1| 111|Caenorhabditis elegans Hypothetical
protein K02A6.2 protein.
Length = 111
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 174 ARDGNKSPEWCSRAVTLLHGSVATVVGLYQCGAEAITPCRLTMKTTPWHY 323
AR+ +P C +T H V ++ G+Y A + TM T+PW Y
Sbjct: 43 ARNCFFTPVQCMLPMTDSHKDVQSLHGVYSPTATQVRRSVDTMLTSPWGY 92
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = -1
Query: 371 PQKVECEVTPGP*H*SVMPRRCLHGKSAWRYSFCSALI*TDDCSNASVQEGHC 213
P C + P P +V LH K +R + C I T CS + + G C
Sbjct: 959 PTIPRCIINPCPISEAVKNETSLHLKKCYRSNDCFDAIMTTHCSMVTQEFGFC 1011
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,413,476
Number of Sequences: 27780
Number of extensions: 352386
Number of successful extensions: 886
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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