Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15c10
(654 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 30 0.34
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 0.59
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 27 1.8
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 27 2.4
SPAC22H10.08 |||DUF2009 protein|Schizosaccharomyces pombe|chr 1|... 27 3.1
SPCC1840.08c |||protein disulfide isomerase |Schizosaccharomyces... 26 4.1
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 4.1
SPAC1F3.05 |||adaptin |Schizosaccharomyces pombe|chr 1|||Manual 26 5.5
SPBC215.06c |||human LYHRT homolog|Schizosaccharomyces pombe|chr... 25 7.2
SPAC4F8.04 |||Brix domain protein Rpf1|Schizosaccharomyces pombe... 25 9.5
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 9.5
SPBC11G11.05 |rpa34||DNA-directed RNA polymerase I complex subun... 25 9.5
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 29.9 bits (64), Expect = 0.34
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSS-NALVLSNSCCSTRNT 289
SSPPF S SV +++PSS ++ SNS +T T
Sbjct: 344 SSPPFYSNSSVIPTSVPSSVSSFTSSNSSYTTTLT 378
Score = 29.9 bits (64), Expect = 0.34
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSS-NALVLSNSCCSTRNT 289
SSPPF S SV +++PSS ++ SNS +T T
Sbjct: 398 SSPPFYSNSSVIPTSVPSSVSSFTSSNSSYTTTLT 432
Score = 28.3 bits (60), Expect = 1.0
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSS-NALVLSNSCCSTRNT 289
SSPPF S SV ++ PSS ++ SNS +T T
Sbjct: 452 SSPPFYSNSSVIPTSAPSSVSSFTSSNSSYTTTLT 486
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSSNALVLSNSCCST 298
SS PF S SV +++PSS + S+S T
Sbjct: 290 SSSPFYSNSSVIPTSVPSSVSSFTSSSSSYT 320
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 29.1 bits (62), Expect = 0.59
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVSMHWSHIAV 229
SS P TS ++ TST P +++ VL++S T +T ST + S S+ S A+
Sbjct: 3296 SSTPITSSTTLNTST-PITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTAI 3348
Score = 28.3 bits (60), Expect = 1.0
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVSM 250
SS P TS ++ TST P +++ VL++S T +T ST + S S+
Sbjct: 680 SSTPITSSTALNTST-PITSSSVLNSSTAITSSTALNTSTPITSSSV 725
Score = 27.1 bits (57), Expect = 2.4
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVSMHWSHIAV 229
SS P TS ++ TST P +++ VL++S T ++ ST + S S+ S A+
Sbjct: 3068 SSTPITSSTALNTST-PITSSSVLNSSTAITSSSIVNSSTPITSSSVLNSSTAI 3120
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVSM 250
SS P TS ++ TST P +++ VL++S T ++ ST + S S+
Sbjct: 3200 SSTPITSSTTLNTST-PITSSSVLNSSTAITSSSVLNSSTPITSSSV 3245
Score = 26.6 bits (56), Expect = 3.1
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVSMHWSHIAV 229
SS P TS V TST P +++ V+++S T +T ST + S S+ S A+
Sbjct: 3272 SSTPITSSTVVNTST-PITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSSTAI 3324
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVSM 250
SS P TS V TST P +++ V+++S T +T ST + S S+
Sbjct: 476 SSTPITSSTVVNTST-PITSSTVVNSSTPITSSTALNTSTPITSSSV 521
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVSM 250
SS P TS V TST P +++ V+++S T +T ST + S S+
Sbjct: 884 SSTPITSSTVVNTST-PITSSTVVNSSTPITSSTALNTSTPITSSSV 929
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVSM 250
SS P TS V TST P +++ V+++S T +T ST + S S+
Sbjct: 1040 SSTPITSSTVVNTST-PITSSTVVNSSTPITSSTALNTSTPITSSSV 1085
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVSM 250
SS P TS V TST P +++ V+++S T +T ST + S S+
Sbjct: 1664 SSTPITSSTVVNTST-PITSSTVVNSSTPITSSTALNTSTPITSSSV 1709
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVSM 250
SS P TS V TST P +++ V+++S T +T ST + S S+
Sbjct: 1820 SSTPITSSTVVNTST-PITSSTVVNSSTPITSSTALNTSTPITSSSV 1865
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVSM 250
SS P TS V TST P +++ V+++S T +T ST + S S+
Sbjct: 2012 SSTPITSSTVVNTST-PITSSTVVNSSTPITSSTALNTSTPITSSSV 2057
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVSM 250
SS P TS V TST P +++ V+++S T +T ST + S S+
Sbjct: 2276 SSTPITSSTVVNTST-PITSSTVVNSSTPITSSTALNTSTPITSSSV 2321
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVSM 250
SS P TS V TST P +++ V+++S T +T ST + S S+
Sbjct: 2492 SSTPITSSTVVNTST-PITSSTVVNSSTPITSSTVLNSSTPITSSSV 2537
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVSM 250
SS P TS V TST P +++ V+++S T +T ST + S S+
Sbjct: 2588 SSTPITSSTVVNTST-PITSSTVVNSSTPITSSTALNTSTPITSSSV 2633
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVSM 250
SS P TS V TST P +++ V+++S T +T ST + S S+
Sbjct: 2684 SSTPITSSTVVNTST-PITSSTVVNSSTPITSSTALNTSTPITSSSV 2729
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVSM 250
SS P TS V TST P +++ V+++S T +T ST + S S+
Sbjct: 2792 SSTPITSSTVVNTST-PITSSTVVNSSTPITSSTVLNSSTPITSSSV 2837
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVSM 250
SS P TS V TST P +++ V+++S T +T ST + S S+
Sbjct: 2912 SSTPITSSTVVNTST-PITSSTVVNSSTPITSSTALNTSTPITSSSV 2957
Score = 26.2 bits (55), Expect = 4.1
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVSM 250
SS P TS ++ TST P +++ VL++S T ++ ST + S S+
Sbjct: 3152 SSTPITSSTTLNTST-PITSSSVLNSSTAITSSSIVNSSTPITSSSV 3197
Score = 25.8 bits (54), Expect = 5.5
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVSM 250
SS P TS V TST P +++ V+++S T +T ST + S S+
Sbjct: 1556 SSTPITSSTVVNTST-PITSSSVVNSSTPITSSTALNTSTPITSSSV 1601
Score = 25.4 bits (53), Expect = 7.2
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVSM 250
SS P TS V TST P +++ V+++S T +T ST + S S+
Sbjct: 1412 SSTPITSSTVVNTST-PITSSTVVNSSTPITSSTVVNTSTPITSSSV 1457
Score = 25.0 bits (52), Expect = 9.5
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVSM 250
SS P TS V TST P +++ V+++S T T ST + S S+
Sbjct: 2540 SSTPITSSTVVNTST-PITSSTVVNSSTPITSLTALNSSTPITSSSV 2585
Score = 25.0 bits (52), Expect = 9.5
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = -1
Query: 390 SSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRS 259
SS P TS V TST P +++ V+++S T +T ST + S
Sbjct: 3008 SSTPITSSTVVNTST-PITSSTVVNSSTPITSSTALNTSTPITS 3050
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 27.5 bits (58), Expect = 1.8
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +2
Query: 251 IDTLRSSVDFRRQV-LRVEQQLLERTKALEDGIVEVKT-EPLDVNG-GEDSDD 400
+ +R ++D ++ + RV ++ E+T +D VE+ T E L+ NG E DD
Sbjct: 114 VSVIRQTIDRKKSLERRVREEQEEKTDNEDDNDVEISTQESLENNGLAEKKDD 166
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 27.1 bits (57), Expect = 2.4
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 117 YNEVLGSRSSLIGY*GALPLDENEDLESISFRRPRNGRPRYATNASIRFAALWTSDGR 290
++ +LGS S + G ED+++ S R+G PR NA+ F+ W DG+
Sbjct: 78 FSRMLGSTSHIFGI--------REDMDNESSEEERDGIPRVEGNAADPFS--WIPDGK 125
>SPAC22H10.08 |||DUF2009 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 492
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +2
Query: 548 DAKDKEKSMKRIKRRTVTIERSKVKLQWTRTAIAD 652
D K KE++++ I ++ + + +K K++W +IAD
Sbjct: 211 DIKAKERAVEHIAKKYYSSKITKEKVRWCLYSIAD 245
>SPCC1840.08c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 561
Score = 26.2 bits (55), Expect = 4.1
Identities = 11/48 (22%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -3
Query: 514 SLPLG-IHADTLLPHTSVTLLYIWLRFLLNLHFGARQKVIVGIFSAIH 374
S+P G ++ + ++S+ L+ +W+ +L + F R+ ++ F ++H
Sbjct: 496 SIPRGYVYLSEIKQYSSLILISLWISLILFVSFLNRRLILHYSFESVH 543
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.2 bits (55), Expect = 4.1
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = -1
Query: 423 TSVQGRK*SSESSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVS 253
TSV +S SS P TS S TST SS A + S S T + ST L S +
Sbjct: 376 TSVNSTSATSASSTPLTSANST-TSTSVSSTAPSYNTS--SVLPTSSVSSTPLSSAN 429
Score = 26.2 bits (55), Expect = 4.1
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = -1
Query: 423 TSVQGRK*SSESSPPFTSKGSVFTSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVS 253
TSV +S SS P TS S TST SS A + S S T + ST L S +
Sbjct: 490 TSVNSTSATSASSTPLTSANST-TSTSVSSTAPSYNTS--SVLPTSSVSSTPLSSAN 543
>SPAC1F3.05 |||adaptin |Schizosaccharomyces pombe|chr 1|||Manual
Length = 510
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 281 RRQVLRVEQQLLERTKALEDGIVEVKTEPLDV 376
R + LRV+Q L+ +T +LE+G + E L V
Sbjct: 229 RSKALRVKQFLVNQTVSLEEGTLADAVESLKV 260
>SPBC215.06c |||human LYHRT homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 178
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 494 VNPEWEGDDTNI-PTNNRVDAKDKEKSMKRIKRRTVT 601
++P + +T PT + +D +K+K K+ K+ TV+
Sbjct: 82 LSPNTDNQNTPAGPTKHSLDENEKDKENKKSKKETVS 118
>SPAC4F8.04 |||Brix domain protein Rpf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 306
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 520 HQHSNKQSGRRQRQGKEHEKDQEE 591
HQ + + RR+ + KE EKD E+
Sbjct: 19 HQKNKDKLERRKERAKEEEKDPEK 42
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.0 bits (52), Expect = 9.5
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 384 PPFTSKGSVF-TSTIPSSNALVLSNSCCSTRNTCRLKSTELRSVS 253
PP TS S F TS I SS+ + N+ + TE+++ S
Sbjct: 693 PPTTSFPSTFTTSFITSSSLSSIPNNSTEVKTASTSSGTEIKTAS 737
>SPBC11G11.05 |rpa34||DNA-directed RNA polymerase I complex subunit
Rpa34 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 251
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 523 QHSNKQSGRRQRQGKEHEKDQEENSYY*KVKS*TPMDQN 639
Q+ K+ + ++GK +KD+EE K K + ++N
Sbjct: 213 QNKGKEKQKELKKGKREKKDEEEKPKKKKQKKSSKKEKN 251
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,455,457
Number of Sequences: 5004
Number of extensions: 48533
Number of successful extensions: 193
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 193
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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