Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15c10
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51587-1|AAB81549.1| 767|Homo sapiens Golgi complex autoantigen... 30 6.3
BC032853-1|AAH32853.1| 767|Homo sapiens golgi autoantigen, golg... 30 6.3
AL451125-2|CAI14346.1| 767|Homo sapiens golgi autoantigen, golg... 30 6.3
AL354928-1|CAI39632.1| 767|Homo sapiens golgi autoantigen, golg... 30 6.3
AB208858-1|BAD92095.1| 400|Homo sapiens golgin 97 variant protein. 30 6.3
BC150274-1|AAI50275.1| 1981|Homo sapiens CASP8AP2 protein protein. 30 8.3
BC132830-1|AAI32831.1| 1982|Homo sapiens CASP8 associated protei... 30 8.3
BC132828-1|AAI32829.1| 1982|Homo sapiens CASP8 associated protei... 30 8.3
BC056685-1|AAH56685.1| 370|Homo sapiens CASP8AP2 protein protein. 30 8.3
AL645487-1|CAH72345.1| 3117|Homo sapiens centrosomal protein 350... 30 8.3
AL590632-2|CAI15177.1| 3117|Homo sapiens centrosomal protein 350... 30 8.3
AL590632-1|CAM21477.1| 130|Homo sapiens centrosomal protein 350... 30 8.3
AL390718-1|CAI14833.1| 3117|Homo sapiens centrosomal protein 350... 30 8.3
AL365436-3|CAI16590.1| 1203|Homo sapiens cingulin protein. 30 8.3
AL353692-6|CAI16239.1| 1964|Homo sapiens CASP8 associated protei... 30 8.3
AF387614-1|AAL91355.1| 130|Homo sapiens gm133 protein. 30 8.3
AF287356-1|AAL55733.1| 3117|Homo sapiens centrosome-associated p... 30 8.3
AF263462-1|AAF74498.1| 1203|Homo sapiens cingulin protein. 30 8.3
AF164678-1|AAD45537.2| 1982|Homo sapiens FLASH homolog RIP25 pro... 30 8.3
AF154415-1|AAF03367.1| 1982|Homo sapiens FLASH protein. 30 8.3
AB037740-1|BAA92557.1| 1208|Homo sapiens KIAA1319 protein protein. 30 8.3
AB037736-1|BAA92553.2| 1981|Homo sapiens KIAA1315 protein protein. 30 8.3
>U51587-1|AAB81549.1| 767|Homo sapiens Golgi complex autoantigen
golgin-97 protein.
Length = 767
Score = 30.3 bits (65), Expect = 6.3
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 263 RSSVDFRRQVLRVEQQLLERTKALEDGIVEVK 358
+ S ++Q L +EQQ LERT+ALE IV ++
Sbjct: 392 QESSHVQQQALALEQQFLERTQALEAQIVALE 423
>BC032853-1|AAH32853.1| 767|Homo sapiens golgi autoantigen, golgin
subfamily a, 1 protein.
Length = 767
Score = 30.3 bits (65), Expect = 6.3
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 263 RSSVDFRRQVLRVEQQLLERTKALEDGIVEVK 358
+ S ++Q L +EQQ LERT+ALE IV ++
Sbjct: 392 QESSHVQQQALALEQQFLERTQALEAQIVALE 423
>AL451125-2|CAI14346.1| 767|Homo sapiens golgi autoantigen, golgin
subfamily a, 1 protein.
Length = 767
Score = 30.3 bits (65), Expect = 6.3
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 263 RSSVDFRRQVLRVEQQLLERTKALEDGIVEVK 358
+ S ++Q L +EQQ LERT+ALE IV ++
Sbjct: 392 QESSHVQQQALALEQQFLERTQALEAQIVALE 423
>AL354928-1|CAI39632.1| 767|Homo sapiens golgi autoantigen, golgin
subfamily a, 1 protein.
Length = 767
Score = 30.3 bits (65), Expect = 6.3
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 263 RSSVDFRRQVLRVEQQLLERTKALEDGIVEVK 358
+ S ++Q L +EQQ LERT+ALE IV ++
Sbjct: 392 QESSHVQQQALALEQQFLERTQALEAQIVALE 423
>AB208858-1|BAD92095.1| 400|Homo sapiens golgin 97 variant protein.
Length = 400
Score = 30.3 bits (65), Expect = 6.3
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 263 RSSVDFRRQVLRVEQQLLERTKALEDGIVEVK 358
+ S ++Q L +EQQ LERT+ALE IV ++
Sbjct: 291 QESSHVQQQALALEQQFLERTQALEAQIVALE 322
>BC150274-1|AAI50275.1| 1981|Homo sapiens CASP8AP2 protein protein.
Length = 1981
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 494 VNPEWEGDDTNIPTNNRVDAKDKEKSMKRIKRRTVTIERSKVKLQ 628
+N WE + +++RVD++ +K ++R R+ I R +VK Q
Sbjct: 318 INSSWEKETPGERSHSRVDSQ-SDKKLERQSERSQNINRKEVKSQ 361
>BC132830-1|AAI32831.1| 1982|Homo sapiens CASP8 associated protein 2
protein.
Length = 1982
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 494 VNPEWEGDDTNIPTNNRVDAKDKEKSMKRIKRRTVTIERSKVKLQ 628
+N WE + +++RVD++ +K ++R R+ I R +VK Q
Sbjct: 318 INSSWEKETPGERSHSRVDSQ-SDKKLERQSERSQNINRKEVKSQ 361
>BC132828-1|AAI32829.1| 1982|Homo sapiens CASP8 associated protein 2
protein.
Length = 1982
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 494 VNPEWEGDDTNIPTNNRVDAKDKEKSMKRIKRRTVTIERSKVKLQ 628
+N WE + +++RVD++ +K ++R R+ I R +VK Q
Sbjct: 318 INSSWEKETPGERSHSRVDSQ-SDKKLERQSERSQNINRKEVKSQ 361
>BC056685-1|AAH56685.1| 370|Homo sapiens CASP8AP2 protein protein.
Length = 370
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 494 VNPEWEGDDTNIPTNNRVDAKDKEKSMKRIKRRTVTIERSKVKLQ 628
+N WE + +++RVD++ +K ++R R+ I R +VK Q
Sbjct: 318 INSSWEKETPGERSHSRVDSQ-SDKKLERQSERSQNINRKEVKSQ 361
>AL645487-1|CAH72345.1| 3117|Homo sapiens centrosomal protein 350kDa
protein.
Length = 3117
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 218 AQWSTAICDQCIDTLRSSVDFRRQVLRVEQQLLE 319
A STA+CD +DT +SS R++ R + + L+
Sbjct: 51 APTSTAVCDSVMDTKKSSTSATRKISRKDGRYLD 84
>AL590632-2|CAI15177.1| 3117|Homo sapiens centrosomal protein 350kDa
protein.
Length = 3117
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 218 AQWSTAICDQCIDTLRSSVDFRRQVLRVEQQLLE 319
A STA+CD +DT +SS R++ R + + L+
Sbjct: 51 APTSTAVCDSVMDTKKSSTSATRKISRKDGRYLD 84
>AL590632-1|CAM21477.1| 130|Homo sapiens centrosomal protein 350kDa
protein.
Length = 130
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 218 AQWSTAICDQCIDTLRSSVDFRRQVLRVEQQLLE 319
A STA+CD +DT +SS R++ R + + L+
Sbjct: 50 APTSTAVCDSVMDTKKSSTSATRKISRKDGRYLD 83
>AL390718-1|CAI14833.1| 3117|Homo sapiens centrosomal protein 350kDa
protein.
Length = 3117
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 218 AQWSTAICDQCIDTLRSSVDFRRQVLRVEQQLLE 319
A STA+CD +DT +SS R++ R + + L+
Sbjct: 51 APTSTAVCDSVMDTKKSSTSATRKISRKDGRYLD 84
>AL365436-3|CAI16590.1| 1203|Homo sapiens cingulin protein.
Length = 1203
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +2
Query: 173 AGRERGLGEHQLSSSAQWSTAICDQCIDTLRSSVDFRRQVLRVEQQLLERTKALEDG 343
A + + + E + + Q A+ +T + +FRR++L +EQQL E T+ L DG
Sbjct: 700 ASKAKMVAEAEATVLGQRRAAVETTLRETQEENDEFRRRILGLEQQLKE-TRGLVDG 755
>AL353692-6|CAI16239.1| 1964|Homo sapiens CASP8 associated protein 2
protein.
Length = 1964
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 494 VNPEWEGDDTNIPTNNRVDAKDKEKSMKRIKRRTVTIERSKVKLQ 628
+N WE + +++RVD++ +K ++R R+ I R +VK Q
Sbjct: 318 INSSWEKETPGERSHSRVDSQ-SDKKLERQSERSQNINRKEVKSQ 361
>AF387614-1|AAL91355.1| 130|Homo sapiens gm133 protein.
Length = 130
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 218 AQWSTAICDQCIDTLRSSVDFRRQVLRVEQQLLE 319
A STA+CD +DT +SS R++ R + + L+
Sbjct: 50 APTSTAVCDSVMDTKKSSTSATRKISRKDGRYLD 83
>AF287356-1|AAL55733.1| 3117|Homo sapiens centrosome-associated
protein 350 protein.
Length = 3117
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 218 AQWSTAICDQCIDTLRSSVDFRRQVLRVEQQLLE 319
A STA+CD +DT +SS R++ R + + L+
Sbjct: 51 APTSTAVCDSVMDTKKSSTSATRKISRKDGRYLD 84
>AF263462-1|AAF74498.1| 1203|Homo sapiens cingulin protein.
Length = 1203
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +2
Query: 173 AGRERGLGEHQLSSSAQWSTAICDQCIDTLRSSVDFRRQVLRVEQQLLERTKALEDG 343
A + + + E + + Q A+ +T + +FRR++L +EQQL E T+ L DG
Sbjct: 700 ASKAKMVAEAEATVLGQRRAAVETTLRETQEENDEFRRRILGLEQQLKE-TRGLVDG 755
>AF164678-1|AAD45537.2| 1982|Homo sapiens FLASH homolog RIP25
protein.
Length = 1982
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 494 VNPEWEGDDTNIPTNNRVDAKDKEKSMKRIKRRTVTIERSKVKLQ 628
+N WE + +++RVD++ +K ++R R+ I R +VK Q
Sbjct: 318 INSSWEKETPGERSHSRVDSQ-SDKKLERQSERSQNINRKEVKSQ 361
>AF154415-1|AAF03367.1| 1982|Homo sapiens FLASH protein.
Length = 1982
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 494 VNPEWEGDDTNIPTNNRVDAKDKEKSMKRIKRRTVTIERSKVKLQ 628
+N WE + +++RVD++ +K ++R R+ I R +VK Q
Sbjct: 318 INSSWEKETPGERSHSRVDSQ-SDKKLERQSERSQNINRKEVKSQ 361
>AB037740-1|BAA92557.1| 1208|Homo sapiens KIAA1319 protein protein.
Length = 1208
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +2
Query: 173 AGRERGLGEHQLSSSAQWSTAICDQCIDTLRSSVDFRRQVLRVEQQLLERTKALEDG 343
A + + + E + + Q A+ +T + +FRR++L +EQQL E T+ L DG
Sbjct: 705 ASKAKMVAEAEATVLGQRRAAVETTLRETQEENDEFRRRILGLEQQLKE-TRGLVDG 760
>AB037736-1|BAA92553.2| 1981|Homo sapiens KIAA1315 protein protein.
Length = 1981
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 494 VNPEWEGDDTNIPTNNRVDAKDKEKSMKRIKRRTVTIERSKVKLQ 628
+N WE + +++RVD++ +K ++R R+ I R +VK Q
Sbjct: 318 INSSWEKETPGERSHSRVDSQ-SDKKLERQSERSQNINRKEVKSQ 361
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,254,944
Number of Sequences: 237096
Number of extensions: 1817966
Number of successful extensions: 5239
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5239
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -