Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15c10
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    27   0.21 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    25   0.84 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   1.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   1.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   1.9  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    21   7.9  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   7.9  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +1

Query: 520 HQHSNKQSGRRQRQGKEHEKDQEEN 594
           +Q++NKQ+G RQ   ++++  Q  N
Sbjct: 449 NQNANKQNGNRQNDNRQNDNKQNGN 473


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +1

Query: 454 KEASQKCEGEVCRRESRVGGR*HQHSNKQSGRR 552
           KE   KC+  VC R     G+ H+H    +G R
Sbjct: 144 KERPYKCD--VCERAFEHSGKLHRHMRIHTGER 174


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 218 AQWSTAICDQCIDTLRSSVDFRRQVLR 298
           A   + +C QC+  L S+ D  RQV +
Sbjct: 538 APLDSKLCQQCVGNLASNNDRIRQVTK 564


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 218 AQWSTAICDQCIDTLRSSVDFRRQVLR 298
           A   + +C QC+  L S+ D  RQV +
Sbjct: 538 APLDSKLCQQCVGNLASNNDRIRQVTK 564


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 218 AQWSTAICDQCIDTLRSSVDFRRQVLR 298
           A   + +C QC+  L S+ D  RQV +
Sbjct: 538 APLDSKLCQQCVGNLASNNDRIRQVTK 564


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/45 (24%), Positives = 20/45 (44%)
 Frame = +1

Query: 439 TEARYKEASQKCEGEVCRRESRVGGR*HQHSNKQSGRRQRQGKEH 573
           TEA+YKE  +K    +   E  + G  +  +      +Q+   +H
Sbjct: 124 TEAQYKEMEEKVSSTLSGLEGELKGTFYPLTGMSKETQQKLIDDH 168


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/45 (24%), Positives = 20/45 (44%)
 Frame = +1

Query: 439 TEARYKEASQKCEGEVCRRESRVGGR*HQHSNKQSGRRQRQGKEH 573
           TEA+YKE  +K    +   E  + G  +  +      +Q+   +H
Sbjct: 140 TEAQYKEMEEKVSSTLSGLEGELKGTFYPLTGMSKETQQKLIDDH 184


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,724
Number of Sequences: 438
Number of extensions: 3525
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)