Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15c09
         (604 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   2.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   2.3  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   7.0  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   9.3  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   9.3  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    21   9.3  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    21   9.3  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    21   9.3  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    21   9.3  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    21   9.3  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    21   9.3  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    21   9.3  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    21   9.3  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    21   9.3  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    21   9.3  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    21   9.3  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    21   9.3  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    21   9.3  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -1

Query: 568 SRLLEYDSSKTDIFGIHMYTGRSGGRPLPR 479
           S +++ DS    ++G H+Y GR+ G PL +
Sbjct: 626 SNVVQIDSP---VWGRHIYDGRAMGFPLDK 652


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -1

Query: 568 SRLLEYDSSKTDIFGIHMYTGRSGGRPLPR 479
           S +++ DS    ++G H+Y GR+ G PL +
Sbjct: 626 SNVVQIDSP---VWGRHIYDGRAMGFPLDK 652


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 152 SKKKNCFEYSSHNNYFILGKNITSY 78
           S   N ++YS++NNY     N  +Y
Sbjct: 316 SSLSNNYKYSNYNNYNNNYNNYNNY 340


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 152 SKKKNCFEYSSHNNY 108
           S   N ++YS++NNY
Sbjct: 83  SSLSNNYKYSNYNNY 97


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 152 SKKKNCFEYSSHNNY 108
           S   N ++YS++NNY
Sbjct: 83  SSLSNNYKYSNYNNY 97


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 152 SKKKNCFEYSSHNNY 108
           S   N ++YS++NNY
Sbjct: 83  SSLSNNYKYSNYNNY 97


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 152 SKKKNCFEYSSHNNY 108
           S   N ++YS++NNY
Sbjct: 83  SSLSNNYKYSNYNNY 97


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 152 SKKKNCFEYSSHNNY 108
           S   N ++YS++NNY
Sbjct: 83  SSLSNNYKYSNYNNY 97


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 152 SKKKNCFEYSSHNNY 108
           S   N ++YS++NNY
Sbjct: 83  SSLSNNYKYSNYNNY 97


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 152 SKKKNCFEYSSHNNY 108
           S   N ++YS++NNY
Sbjct: 83  SSLSNNYKYSNYNNY 97


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 152 SKKKNCFEYSSHNNY 108
           S   N ++YS++NNY
Sbjct: 83  SSLSNNYKYSNYNNY 97


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 152 SKKKNCFEYSSHNNY 108
           S   N ++YS++NNY
Sbjct: 83  SSLSNNYKYSNYNNY 97


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 152 SKKKNCFEYSSHNNY 108
           S   N ++YS++NNY
Sbjct: 83  SSLSNNYKYSNYNNY 97


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 152 SKKKNCFEYSSHNNY 108
           S   N ++YS++NNY
Sbjct: 83  SSLSNNYKYSNYNNY 97


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 152 SKKKNCFEYSSHNNY 108
           S   N ++YS++NNY
Sbjct: 83  SSLSNNYKYSNYNNY 97


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 152 SKKKNCFEYSSHNNY 108
           S   N ++YS++NNY
Sbjct: 83  SSLSNNYKYSNYNNY 97


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 152 SKKKNCFEYSSHNNY 108
           S   N ++YS++NNY
Sbjct: 83  SSLSNNYKYSNYNNY 97


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 152 SKKKNCFEYSSHNNY 108
           S   N ++YS++NNY
Sbjct: 316 SSLSNNYKYSNYNNY 330


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,143
Number of Sequences: 438
Number of extensions: 3544
Number of successful extensions: 33
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)