Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15c08
         (662 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72503-1|CAA96596.2|  617|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z69716-2|CAA93527.1|  474|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AC024831-2|AAN63422.1|  502|Caenorhabditis elegans Hypothetical ...    29   3.9  
AC024831-1|AAN63421.1|  500|Caenorhabditis elegans Hypothetical ...    29   3.9  
Z93385-10|CAB07643.1|  702|Caenorhabditis elegans Hypothetical p...    27   9.0  
Z81114-7|CAB03290.1|  702|Caenorhabditis elegans Hypothetical pr...    27   9.0  

>Z72503-1|CAA96596.2|  617|Caenorhabditis elegans Hypothetical
           protein C26C6.3 protein.
          Length = 617

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +3

Query: 414 SIYQVHYNIEKRNDELMTKPLALQKGL-EIQAYDLQVAGHRKTEDTKYSGLLQCSNGTIL 590
           S ++ H+N+E++  E + + L   K L   +++  +  GH   ED+K    +    GTI 
Sbjct: 31  SEFKEHFNVEEKQLETVEELLIKMKKLAHSRSFKGREFGHDAVEDSKKEVAISTQQGTIN 90

Query: 591 KPI 599
           K +
Sbjct: 91  KKV 93


>Z69716-2|CAA93527.1|  474|Caenorhabditis elegans Hypothetical
           protein C04B4.2 protein.
          Length = 474

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -1

Query: 440 DIIVHLIDGPLSAHFSPFWSFSRIAHLELDLS*IRSF 330
           D++V +  GPL  + +PF ++  + HL  +   IR+F
Sbjct: 16  DVLVKICTGPLFDNGTPFITYGCVLHLSSERGIIRTF 52


>AC024831-2|AAN63422.1|  502|Caenorhabditis elegans Hypothetical
           protein Y55F3C.7b protein.
          Length = 502

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 94  QSIIVNFSNQFLYLKFFLTICTIVGF 17
           + + VN  N   YL  FL +C+IVGF
Sbjct: 327 ECVSVNEFNLLYYLCIFLAVCSIVGF 352


>AC024831-1|AAN63421.1|  500|Caenorhabditis elegans Hypothetical
           protein Y55F3C.7a protein.
          Length = 500

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 94  QSIIVNFSNQFLYLKFFLTICTIVGF 17
           + + VN  N   YL  FL +C+IVGF
Sbjct: 327 ECVSVNEFNLLYYLCIFLAVCSIVGF 352


>Z93385-10|CAB07643.1|  702|Caenorhabditis elegans Hypothetical
           protein M01E5.6 protein.
          Length = 702

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 22/75 (29%), Positives = 36/75 (48%)
 Frame = +3

Query: 435 NIEKRNDELMTKPLALQKGLEIQAYDLQVAGHRKTEDTKYSGLLQCSNGTILKPIIKDSQ 614
           N+E+ N EL  K +A  +  E +   L+ +  R     +Y  L+Q +   ILK  +K  Q
Sbjct: 625 NVEEMNGELFKKLIANARKCETEI--LEASNDRD----EYYRLMQLTVDQILKKTLKKDQ 678

Query: 615 RREVDFYERMWASSD 659
           R     +++   SSD
Sbjct: 679 RATEHNHQQPTQSSD 693


>Z81114-7|CAB03290.1|  702|Caenorhabditis elegans Hypothetical
           protein M01E5.6 protein.
          Length = 702

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 22/75 (29%), Positives = 36/75 (48%)
 Frame = +3

Query: 435 NIEKRNDELMTKPLALQKGLEIQAYDLQVAGHRKTEDTKYSGLLQCSNGTILKPIIKDSQ 614
           N+E+ N EL  K +A  +  E +   L+ +  R     +Y  L+Q +   ILK  +K  Q
Sbjct: 625 NVEEMNGELFKKLIANARKCETEI--LEASNDRD----EYYRLMQLTVDQILKKTLKKDQ 678

Query: 615 RREVDFYERMWASSD 659
           R     +++   SSD
Sbjct: 679 RATEHNHQQPTQSSD 693


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,564,266
Number of Sequences: 27780
Number of extensions: 331306
Number of successful extensions: 644
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 644
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)