Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15c08
         (662 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    24   1.1  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    24   1.1  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    24   1.1  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   7.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   7.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   7.9  

>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = -3

Query: 237 INIL*YPQSYGNFVITIVIYNHLLTSQTYDLTTFENVRKVFFFLKYGFKALL 82
           + ++ YP+ YG  V+++  Y ++L  +   L  +E    + F+   G K +L
Sbjct: 145 VYLIDYPEDYGKRVLSMDGYQNILDKKDELLGEWEKRAPMGFYGTRGKKIIL 196


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = -3

Query: 237 INIL*YPQSYGNFVITIVIYNHLLTSQTYDLTTFENVRKVFFFLKYGFKALL 82
           + ++ YP+ YG  V+++  Y ++L  +   L  +E    + F+   G K +L
Sbjct: 145 VYLIDYPEDYGKRVLSMDGYQNILDKKDELLGEWEKRAPMGFYGTRGKKIIL 196


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = -3

Query: 237 INIL*YPQSYGNFVITIVIYNHLLTSQTYDLTTFENVRKVFFFLKYGFKALL 82
           + ++ YP+ YG  V+++  Y ++L  +   L  +E    + F+   G K +L
Sbjct: 145 VYLIDYPEDYGKRVLSMDGYQNILDKKDELLGEWEKRAPMGFYGTRGKKIIL 196


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/19 (31%), Positives = 16/19 (84%)
 Frame = +3

Query: 390 RTKVRRQRSIYQVHYNIEK 446
           +T V RQ++IY++ +++++
Sbjct: 29  KTYVTRQKNIYELFWHVDQ 47


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/19 (31%), Positives = 16/19 (84%)
 Frame = +3

Query: 390 RTKVRRQRSIYQVHYNIEK 446
           +T V RQ++IY++ +++++
Sbjct: 29  KTYVTRQKNIYELFWHVDQ 47


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 13/48 (27%), Positives = 19/48 (39%)
 Frame = +3

Query: 378 ERPKRTKVRRQRSIYQVHYNIEKRNDELMTKPLALQKGLEIQAYDLQV 521
           E  K   +  Q+  Y  HY   K    L  +P+     LE+   D +V
Sbjct: 448 ENYKSLNLAAQKREYYSHYVAFKSLSYLKKQPVIANGSLEVDVIDGRV 495


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,476
Number of Sequences: 438
Number of extensions: 4064
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)