Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15c03
         (724 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    23   3.9  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    22   5.1  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   5.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   5.1  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   5.1  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    22   5.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   5.1  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   6.7  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   8.9  

>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 6   NLCSWIIYLYY 38
           N+C W+IY+ Y
Sbjct: 484 NICYWVIYVTY 494


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 390 CLKATLYCTRRRLHAAVYS 334
           C  AT YC   +LH   YS
Sbjct: 50  CTYATKYCHSLKLHLRKYS 68


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 658 IREHAEPVHGVAKVTKFRLNH 596
           I+ HA+  + + K  ++RLNH
Sbjct: 475 IQSHAKAKNTMIKARQYRLNH 495


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 658 IREHAEPVHGVAKVTKFRLNH 596
           I+ HA+  + + K  ++RLNH
Sbjct: 475 IQSHAKAKNTMIKARQYRLNH 495


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 658 IREHAEPVHGVAKVTKFRLNH 596
           I+ HA+  + + K  ++RLNH
Sbjct: 101 IQSHAKAKNTMIKARQYRLNH 121


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 183 KIHVRNCMKRLNCTKMRVN 239
           KI  R C K   C+ +R+N
Sbjct: 49  KIQYRPCTKNQQCSILRIN 67


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 183 KIHVRNCMKRLNCTKMRVN 239
           KI  R C K   C+ +R+N
Sbjct: 98  KIQYRPCTKNQQCSILRIN 116


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 14/61 (22%), Positives = 25/61 (40%)
 Frame = -2

Query: 567 LSIRVINNDTISAMYLLVFPLSSLMRFGLFSLIRSKAAGQSNLYLATKASILGNSSACTC 388
           L + + +  T ++  L  FP  +++      LIR +  G         A  +G  S CT 
Sbjct: 159 LRVALTSELTAASTVLGFFPALNIVADSFIELIRRQRVGYKVTGFEELAYKMGLESTCTL 218

Query: 387 L 385
           +
Sbjct: 219 I 219


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 5/19 (26%), Positives = 14/19 (73%)
 Frame = +3

Query: 249 MITWLSSMLSSVPFSTWRR 305
           +  WL +++S++PF+ + +
Sbjct: 163 LAAWLIALISAIPFAIYTK 181


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,022
Number of Sequences: 438
Number of extensions: 4170
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)