Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15b14
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12964-6|AAM29681.1| 329|Caenorhabditis elegans Hypothetical pr... 33 0.15
AF024498-4|AAF39805.2| 319|Caenorhabditis elegans Serpentine re... 33 0.15
AL132902-14|CAE18021.2| 758|Caenorhabditis elegans Hypothetical... 32 0.34
Z79603-2|CAB01893.4| 500|Caenorhabditis elegans Hypothetical pr... 31 0.59
U97550-4|AAK18978.2| 773|Caenorhabditis elegans Hypothetical pr... 31 0.59
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 31 0.78
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 31 0.78
Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical pr... 31 1.0
AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc ... 31 1.0
AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical ... 31 1.0
AL132948-35|CAC51060.2| 887|Caenorhabditis elegans Hypothetical... 30 1.4
Z82074-1|CAB04928.2| 480|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z69659-1|CAA93483.1| 329|Caenorhabditis elegans Hypothetical pr... 30 1.8
AL132864-6|CAB63395.1| 480|Caenorhabditis elegans Hypothetical ... 30 1.8
U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like ... 29 2.4
U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like ... 29 2.4
M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein. 29 2.4
AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical ... 29 2.4
AF097737-1|AAD16170.1| 982|Caenorhabditis elegans hunchback-rel... 29 2.4
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z68222-7|CAA92504.2| 568|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z34799-6|CAA84317.2| 280|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z29094-15|CAA82341.3| 672|Caenorhabditis elegans Hypothetical p... 29 4.2
AF134806-1|AAD29691.1| 280|Caenorhabditis elegans putative zinc... 29 4.2
AF038623-1|AAB94156.1| 346|Caenorhabditis elegans Seven tm rece... 29 4.2
AF024498-2|AAF39804.2| 318|Caenorhabditis elegans Serpentine re... 29 4.2
U61949-4|AAB03150.2| 414|Caenorhabditis elegans Hypothetical pr... 28 5.5
U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical pr... 28 5.5
AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical ... 28 5.5
AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effe... 28 5.5
Z81547-1|CAB04459.1| 354|Caenorhabditis elegans Hypothetical pr... 28 7.3
U97012-6|AAK39147.1| 337|Caenorhabditis elegans Serpentine rece... 28 7.3
U12964-4|AAA91219.3| 447|Caenorhabditis elegans Temporarily ass... 28 7.3
AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical ... 28 7.3
AF022976-11|AAC69080.1| 196|Caenorhabditis elegans Serpentine r... 28 7.3
AC084197-28|AAO38573.1| 350|Caenorhabditis elegans Serpentine r... 28 7.3
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 28 7.3
Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81542-1|CAB04414.1| 379|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81534-5|CAB04348.2| 694|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical p... 27 9.6
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z47074-2|CAA87377.2| 694|Caenorhabditis elegans Hypothetical pr... 27 9.6
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 27 9.6
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 27 9.6
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 27 9.6
U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical p... 27 9.6
U22832-3|AAA64508.2| 359|Caenorhabditis elegans Hypothetical pr... 27 9.6
AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical... 27 9.6
AL031635-11|CAA21038.3| 446|Caenorhabditis elegans Hypothetical... 27 9.6
AL031630-20|CAE17995.1| 122|Caenorhabditis elegans Hypothetical... 27 9.6
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 27 9.6
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 27 9.6
>U12964-6|AAM29681.1| 329|Caenorhabditis elegans Hypothetical
protein F26F4.8 protein.
Length = 329
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Frame = +3
Query: 216 PCSIPGCKHIADTLLDYENHYNATHRYS------CAQCKKV 320
PC GC + +T+L+ ENH N H + C C +V
Sbjct: 107 PCRAEGCDQLVETMLEGENHANTAHHVNGTVSIKCKDCSEV 147
>AF024498-4|AAF39805.2| 319|Caenorhabditis elegans Serpentine
receptor, class x protein102 protein.
Length = 319
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = -2
Query: 580 WNLLDLASSTSIALGILFLSFFCLSKRKSLGILCSRTQWSNLSAVLLNFCLHSS 419
W +L LAS +A+ L FC K S ++CS SN+ +LL + +H++
Sbjct: 32 WIML-LASLLGMAMNFRVLQSFCKQKMSSFYLMCSSKTLSNM-CILLGYVVHNA 83
>AL132902-14|CAE18021.2| 758|Caenorhabditis elegans Hypothetical
protein Y71A12B.15 protein.
Length = 758
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 240 HIADTLLDYENHYNATHRYSCAQCKKVLPSPHFLDLHIQENHDSYFAVMAEKKP 401
++ D D+ ++Y T RY A C+KVLP FLD + + +A+ P
Sbjct: 237 NVLDVSRDWPDNYRQTIRYFLA-CEKVLPELKFLDCSSAYLDEDLYKELAQSHP 289
>Z79603-2|CAB01893.4| 500|Caenorhabditis elegans Hypothetical
protein M163.2 protein.
Length = 500
Score = 31.5 bits (68), Expect = 0.59
Identities = 24/100 (24%), Positives = 37/100 (37%)
Frame = +3
Query: 201 QFKQTPCSIPGCKHIADTLLDYENHYNATHRYSCAQCKKVLPSPHFLDLHIQENHDSYFA 380
Q + C C+ ++ H TH C +V P + EN ++
Sbjct: 257 QKNEVNCKWRYCERSFKQTYEFTAH-KRTHTKQKLYCCEVCPKRYGR----LENLKTHRR 311
Query: 381 VMAEKKPSYCCYIEECKQKFNNTADRLDHCVREHRIPKDF 500
+KP Y C + C + F N +DR H R H K +
Sbjct: 312 THTGEKP-YHCNVPNCNKSFTNASDRSKHSKRTHSNEKPY 350
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/75 (26%), Positives = 28/75 (37%), Gaps = 7/75 (9%)
Frame = +3
Query: 195 NTQFKQTPCSIPGCKHIADTLLDYENHYNATHR----YSC--AQCKKVLPSPHFLDLHIQ 356
+T K C++P C D H TH Y C C P L H++
Sbjct: 313 HTGEKPYHCNVPNCNKSFTNASDRSKHSKRTHSNEKPYCCDFGSCACAYTDPSSLRKHVK 372
Query: 357 ENHDSYFAV-MAEKK 398
H + A+ MA +K
Sbjct: 373 SKHPEHHAMKMAMRK 387
>U97550-4|AAK18978.2| 773|Caenorhabditis elegans Hypothetical
protein T20F7.1 protein.
Length = 773
Score = 31.5 bits (68), Expect = 0.59
Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = +3
Query: 297 SCAQCKKVLPSPHFLDLHIQENHDSYFAVMAEKKPSYCCYIEECKQKFNNTADRLDHCVR 476
SC C V L+ HI+++ + + + C +E C + ++ A + H
Sbjct: 274 SCMYCNFVFRQKALLESHIKKHTTTGKNEVMSESSGLICPVEHCTIRCDSIATVVRHMQV 333
Query: 477 EHRIPKDFRFER---QKKDKNKMPNAMDVDEAKSNKFHLNNSKQKTFSKNKY 623
H + + FER + + KM +++ +KF + K FSK+ Y
Sbjct: 334 THSV-NNIAFERVVFKNFHEFKMWRT-ELERLTMSKFSRTSGKTNKFSKSTY 383
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical protein
C25D7.3 protein.
Length = 2150
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/80 (18%), Positives = 32/80 (40%)
Frame = +3
Query: 261 DYENHYNATHRYSCAQCKKVLPSPHFLDLHIQENHDSYFAVMAEKKPSYCCYIEECKQKF 440
D + + +H++ C QC S +F + E H + E P ++C +
Sbjct: 2067 DVQGQVSESHKHKCVQCSIRNQSVYFSSYSLLELHGKLHQNLHELAPEDADDCQDCYETL 2126
Query: 441 NNTADRLDHCVREHRIPKDF 500
++ + + H + H + F
Sbjct: 2127 TSSFEVIVHRINHHHSRRCF 2146
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger protein
protein.
Length = 2150
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/80 (18%), Positives = 32/80 (40%)
Frame = +3
Query: 261 DYENHYNATHRYSCAQCKKVLPSPHFLDLHIQENHDSYFAVMAEKKPSYCCYIEECKQKF 440
D + + +H++ C QC S +F + E H + E P ++C +
Sbjct: 2067 DVQGQVSESHKHKCVQCSIRNQSVYFSSYSLLELHGKLHQNLHELAPEDADDCQDCYETL 2126
Query: 441 NNTADRLDHCVREHRIPKDF 500
++ + + H + H + F
Sbjct: 2127 TSSFEVIVHRINHHHSRRCF 2146
>Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical
protein M04B2.1 protein.
Length = 870
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +3
Query: 267 ENHYNATHRYSCAQCKKVLPSPHFLDLHIQENHDSYFAVMAEKKPSYCCYIEECKQKFNN 446
EN + ++ C CK+ S + H E H A EK+ Y C I C++ FN
Sbjct: 441 ENLHFTGSKFQCTMCKETDTSEQRMKDHYFETH-LVIAKSEEKESKYPCAI--CEEDFNF 497
Query: 447 TADRLDH 467
R H
Sbjct: 498 KGVREQH 504
>AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc
finger protein protein.
Length = 870
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +3
Query: 267 ENHYNATHRYSCAQCKKVLPSPHFLDLHIQENHDSYFAVMAEKKPSYCCYIEECKQKFNN 446
EN + ++ C CK+ S + H E H A EK+ Y C I C++ FN
Sbjct: 441 ENLHFTGSKFQCTMCKETDTSEQRMKDHYFETH-LVIAKSEEKESKYPCAI--CEEDFNF 497
Query: 447 TADRLDH 467
R H
Sbjct: 498 KGVREQH 504
>AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical
protein Y59E9AL.6 protein.
Length = 214
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +3
Query: 429 KQKFNNTADRLDHCVREHRIPKDFRFERQKKDKNKMPNAMDVDEAKSNKFHLNNSKQKTF 608
++K + ++ D + KD + E +KKD +K D EAKS N SK+
Sbjct: 122 EKKSDKKDEKKDDKKEKDEEKKDDKKEDEKKDDDKKD---DKKEAKSKSKKSNKSKKSKK 178
Query: 609 SKNKYAGKKFTSDKK 653
SK + K DKK
Sbjct: 179 SKREKKDDKKDEDKK 193
>AL132948-35|CAC51060.2| 887|Caenorhabditis elegans Hypothetical
protein Y39B6A.47 protein.
Length = 887
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/40 (27%), Positives = 25/40 (62%)
Frame = +3
Query: 504 FERQKKDKNKMPNAMDVDEAKSNKFHLNNSKQKTFSKNKY 623
FE QK+ ++ ++D DE+ ++ +LN+ + T + N++
Sbjct: 132 FETQKRSSGELSGSLDSDESSTDSVYLNDLQNLTKALNEF 171
>Z82074-1|CAB04928.2| 480|Caenorhabditis elegans Hypothetical
protein W06H12.1 protein.
Length = 480
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Frame = +3
Query: 219 CSIPGCKHIADTLLDYENHYNATH---RYSCAQCKKVLPSPHFLDLH--IQENHDSY 374
C + GC + H+ TH R++C +CK H L LH I N D+Y
Sbjct: 361 CPMDGCNKVFKEKGSVHRHF-VTHIGMRFNCDKCKASYTQKHALMLHQKIHANPDAY 416
>Z69659-1|CAA93483.1| 329|Caenorhabditis elegans Hypothetical
protein F07C6.1 protein.
Length = 329
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +3
Query: 234 CKHIADT--LLDY-ENHYNATHRYSCAQCKKVLPS 329
CK D LL Y EN Y+A H + C CKKVL S
Sbjct: 146 CKQHVDNSDLLTYQENPYHAYH-FKCTTCKKVLES 179
>AL132864-6|CAB63395.1| 480|Caenorhabditis elegans Hypothetical
protein W06H12.1 protein.
Length = 480
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Frame = +3
Query: 219 CSIPGCKHIADTLLDYENHYNATH---RYSCAQCKKVLPSPHFLDLH--IQENHDSY 374
C + GC + H+ TH R++C +CK H L LH I N D+Y
Sbjct: 361 CPMDGCNKVFKEKGSVHRHF-VTHIGMRFNCDKCKASYTQKHALMLHQKIHANPDAY 416
>U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform b protein.
Length = 960
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 198 TQFKQTPCSI-PGCKHIADTLLDYENHYNATHRYSCAQCKKVLPSPHFLDLHIQENH 365
TQ QTP + P C + + + +H N + C+ C + L H++E+H
Sbjct: 306 TQNGQTPMLVCPICGFMCPSKFHFNSHMNTHGDHQCSMCDYTSRTEGRLKKHMRESH 362
>U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform a protein.
Length = 982
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 198 TQFKQTPCSI-PGCKHIADTLLDYENHYNATHRYSCAQCKKVLPSPHFLDLHIQENH 365
TQ QTP + P C + + + +H N + C+ C + L H++E+H
Sbjct: 328 TQNGQTPMLVCPICGFMCPSKFHFNSHMNTHGDHQCSMCDYTSRTEGRLKKHMRESH 384
>M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein.
Length = 1110
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 357 ENHDSYFAVMAEKKPSYCCYIEECKQKFNNTADRLDHCVREH 482
EN ++ +KP Y C +C++ F+N +DR H R H
Sbjct: 291 ENLKTHRRTHTGEKP-YKCEFADCEKAFSNASDRAKHQNRTH 331
>AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical
protein Y47D3A.6a protein.
Length = 1109
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 357 ENHDSYFAVMAEKKPSYCCYIEECKQKFNNTADRLDHCVREH 482
EN ++ +KP Y C +C++ F+N +DR H R H
Sbjct: 290 ENLKTHRRTHTGEKP-YKCEFADCEKAFSNASDRAKHQNRTH 330
>AF097737-1|AAD16170.1| 982|Caenorhabditis elegans
hunchback-related protein protein.
Length = 982
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 198 TQFKQTPCSI-PGCKHIADTLLDYENHYNATHRYSCAQCKKVLPSPHFLDLHIQENH 365
TQ QTP + P C + + + +H N + C+ C + L H++E+H
Sbjct: 328 TQNGQTPMLVCPICGFMCPSKFHFNSHMNTHGDHQCSMCDYTSRTEGRLKKHMRESH 384
>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical
protein F42C5.10 protein.
Length = 1292
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 13/92 (14%)
Frame = +3
Query: 228 PGCKHIADTLLDYENHYNATHRYSCA------QCKKVLPS-PHFLDLH-----IQENHD- 368
PG +HI + + ++Y+ HR + CK V+PS P + DL + D
Sbjct: 456 PGLEHIPYKIGPFADYYDNVHRIILSHTKDLDHCKIVIPSFPDYYDLSTRYEVLHRVEDI 515
Query: 369 SYFAVMAEKKPSYCCYIEECKQKFNNTADRLD 464
+ ++ E+ P+YC Y E+ K + + LD
Sbjct: 516 LHEPIVIEEYPAYCPY-EDTKYEVQEKSVTLD 546
>Z68222-7|CAA92504.2| 568|Caenorhabditis elegans Hypothetical
protein ZK1251.8 protein.
Length = 568
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +3
Query: 459 LDHCVREHR--IPKDFRFERQKKDKNKMPNAMDVDEAKSNKFHLNNSKQKTFSKNKYAGK 632
+D C E IP+ + + +KK KNK +DE + K+ + NS F+ G
Sbjct: 120 IDRCYAEANVPIPEGYGGQPRKKIKNKEEEKDVIDETPAEKWSIGNSVIFAFTVITTIGY 179
Query: 633 KFTSDKKSRG*NKYGLFYG 689
+ + G + +FYG
Sbjct: 180 GHVAPETFEG-RLFLIFYG 197
>Z34799-6|CAA84317.2| 280|Caenorhabditis elegans Hypothetical
protein F34D10.5 protein.
Length = 280
Score = 28.7 bits (61), Expect = 4.2
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 5/123 (4%)
Frame = +3
Query: 195 NTQFKQTPCSIPGCKHIADTLLDYENH---YNATHRYSCAQCKKVLPSPHFLDLHIQENH 365
++ K+ C+ G K DT D + H + Y C QC+K L+ H+++ H
Sbjct: 155 HSDLKRYLCTFCG-KGFNDTF-DLKRHTRTHTGVRPYKCEQCEKSFTQRCSLESHLRKVH 212
Query: 366 DSYFAVMAEKKPSYCCYIEECKQKFNNTADRLDHCVREHRIPKDF-RF-ERQKKDKNKMP 539
+++ S E+C L H H + RF + QKK+ + P
Sbjct: 213 GVTHQYAYKERRSKVFVCEDCGYTDEKFEVYLSHIKVVHPFSAAYLRFTQLQKKNSSMKP 272
Query: 540 NAM 548
+
Sbjct: 273 EQL 275
>Z29094-15|CAA82341.3| 672|Caenorhabditis elegans Hypothetical
protein C07A9.11 protein.
Length = 672
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -1
Query: 653 FLVACEFLSCIFIFAKRLLFAIVQMEFIGLSLVYVHSV 540
+LVA FL+ F+F R+ + + F+GL L+YV +V
Sbjct: 202 YLVALSFLAFCFVFYNRVTL-WMPLTFLGLYLLYVITV 238
>AF134806-1|AAD29691.1| 280|Caenorhabditis elegans putative zinc
finger transcriptionfactor protein.
Length = 280
Score = 28.7 bits (61), Expect = 4.2
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 5/123 (4%)
Frame = +3
Query: 195 NTQFKQTPCSIPGCKHIADTLLDYENH---YNATHRYSCAQCKKVLPSPHFLDLHIQENH 365
++ K+ C+ G K DT D + H + Y C QC+K L+ H+++ H
Sbjct: 155 HSDLKRYLCTFCG-KGFNDTF-DLKRHTRTHTGVRPYKCEQCEKSFTQRCSLESHLRKVH 212
Query: 366 DSYFAVMAEKKPSYCCYIEECKQKFNNTADRLDHCVREHRIPKDF-RF-ERQKKDKNKMP 539
+++ S E+C L H H + RF + QKK+ + P
Sbjct: 213 GVTHQYAYKERRSKVFVCEDCGYTDEKFEVYLSHIKVVHPFSAAYLRFTQLQKKNSSMKP 272
Query: 540 NAM 548
+
Sbjct: 273 EQL 275
>AF038623-1|AAB94156.1| 346|Caenorhabditis elegans Seven tm
receptor protein 170 protein.
Length = 346
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = -1
Query: 674 IFVSSPRFLVACEFLSCIFIFAKRLLFAIVQMEFIGLSLVYVHSVRHFVFILFLSFKTKI 495
I + P FL+ CEFLS +++A+ L +V + R+F+ LF K KI
Sbjct: 272 ILFTCPLFLIDCEFLSAPI----TVIYAVYPALDPLPCLFFVDNYRNFIAGLFSKNKKKI 327
Query: 494 FGYPVLSD 471
V++D
Sbjct: 328 AKVSVVTD 335
>AF024498-2|AAF39804.2| 318|Caenorhabditis elegans Serpentine
receptor, class x protein101 protein.
Length = 318
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -2
Query: 580 WNLLDLASSTSIALGILFLSFFCLSKRKSLGILCSRTQWSNLSAVLLNFCLHSS 419
W +L +AS +++ L F K S ILCS SN+ +LL + +H++
Sbjct: 32 WIML-MASLLGMSVNCCVLRNFYKQKMSSFDILCSSKTLSNM-CILLGYVIHNA 83
>U61949-4|AAB03150.2| 414|Caenorhabditis elegans Hypothetical
protein F49E8.2 protein.
Length = 414
Score = 28.3 bits (60), Expect = 5.5
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +3
Query: 171 YDVDDG-NYNTQF-KQTPCSIPGCKHIADTLLDYEN-HYNATHRYSCAQCKKVLPSPHFL 341
++V+ G N NT+ KQT +H+ D + E + + RY C C + LP
Sbjct: 211 HEVETGRNRNTKIRKQT-------EHVLDAHPESEFLNVDIAKRYECVHCLRTLPVSKSP 263
Query: 342 DLHIQENHD 368
HI E+HD
Sbjct: 264 CEHISEHHD 272
>U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical
protein F56D1.1 protein.
Length = 468
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 270 NHYNATHRYSCAQCKKVLPSPHFLDLHIQENH 365
+H A+H+ C QC P F+ H ++NH
Sbjct: 130 HHSKASHK--CPQCSYTNEKPAFIRRHFEQNH 159
>AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical
protein Y2H9A.1 protein.
Length = 898
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 519 KDKNKMPNAMDVDE--AKSNKFHLNNSKQKTFSKNKYAGKKFTSDKKS 656
K K + P D E AK NK S + K++ AGK T+ KKS
Sbjct: 688 KAKREKPEVADSSEKAAKKNKSSKKKSVKNQNRKSQEAGKNGTASKKS 735
>AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effect
sterile 4 protein.
Length = 898
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 519 KDKNKMPNAMDVDE--AKSNKFHLNNSKQKTFSKNKYAGKKFTSDKKS 656
K K + P D E AK NK S + K++ AGK T+ KKS
Sbjct: 688 KAKREKPEVADSSEKAAKKNKSSKKKSVKNQNRKSQEAGKNGTASKKS 735
>Z81547-1|CAB04459.1| 354|Caenorhabditis elegans Hypothetical
protein F53F8.1 protein.
Length = 354
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = +3
Query: 207 KQTPCSIPGCKHI---ADTLLDYENHYNATHRYSCAQCKKVLPSPHFLDLHIQEN 362
K PC PGC +D L + + ++C +C + L LH++ +
Sbjct: 281 KPYPCEWPGCSWRFARSDELTRHYRKHTGAKPFACKECSRKFSRSDHLQLHMKRH 335
>U97012-6|AAK39147.1| 337|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 15 protein.
Length = 337
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = -1
Query: 572 IGLSLVYVHSVRHFVFILFLSFKTKIFGYPVL 477
IGLS+ Y+H++ H ++ LF+SF +F Y +L
Sbjct: 96 IGLSM-YIHTLTHSLWSLFISF---VFRYLIL 123
>U12964-4|AAA91219.3| 447|Caenorhabditis elegans Temporarily
assigned gene nameprotein 340 protein.
Length = 447
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 486 IPKDFRFERQKKDKNKMPNAMDVDEAKSNKFHLNNSKQK 602
+P++ R+ R++ D + P DEA+SN H +Q+
Sbjct: 150 LPRERRYARRELDGIENPEFSTDDEARSNNRHRRGRRQQ 188
>AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical
protein Y111B2A.10a protein.
Length = 430
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/56 (23%), Positives = 25/56 (44%)
Frame = +3
Query: 201 QFKQTPCSIPGCKHIADTLLDYENHYNATHRYSCAQCKKVLPSPHFLDLHIQENHD 368
+ Q+ + + + D+LL + A ++C C K P+ L +H + HD
Sbjct: 118 RMSQSQWKVEQKQQLEDSLL---KPHTAGSIFTCVMCSKAFPNAEALQIHTDQVHD 170
>AF022976-11|AAC69080.1| 196|Caenorhabditis elegans Serpentine
receptor, class w protein108 protein.
Length = 196
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 602 LLFAIVQMEFIGLSLVYVHSVRHFVFILFLS 510
L+ A V + + SL+ ++S HF+F +FLS
Sbjct: 124 LIIASVDVIIVFASLLTINSTCHFIFCIFLS 154
>AC084197-28|AAO38573.1| 350|Caenorhabditis elegans Serpentine
receptor, class v protein13 protein.
Length = 350
Score = 27.9 bits (59), Expect = 7.3
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = -2
Query: 262 SNSVSAMCLHPGMLHGVCLNWVL*FPSSTS*IPS-LVGCLSCINRTSSSIRFPTPYSLSF 86
+N +SAM L PG H + + L S +P LVG L+ N+T +I F
Sbjct: 114 TNRLSAMLL-PGSYHKMWKSKRLWIAISVQFLPGMLVGLLTFFNKTQLAINEKNGLVPVF 172
Query: 85 SNRDFAFIFFGCQPFWNQLNF 23
++ IFF F+ N+
Sbjct: 173 LDKQMTTIFFSIGGFFLFANY 193
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -3
Query: 369 NRGSPVCAGLRNAAKAEPSCIERTSTCASRCNGFRNLT 256
N G+ C G R E +ER +T A R N F +T
Sbjct: 21 NAGTCQCRGFRPVLNHEDETVERRATRAERENDFAPMT 58
>Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical
protein C18D4.2b protein.
Length = 1376
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = -2
Query: 412 QQYEGFFSAITAKYESWFSCMCRSKKC 332
Q+ F KY+ W C C + KC
Sbjct: 165 QELTNIFGDSIEKYQEWIICRCENLKC 191
>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical
protein C18D4.2a protein.
Length = 1817
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = -2
Query: 412 QQYEGFFSAITAKYESWFSCMCRSKKC 332
Q+ F KY+ W C C + KC
Sbjct: 165 QELTNIFGDSIEKYQEWIICRCENLKC 191
>Z81542-1|CAB04414.1| 379|Caenorhabditis elegans Hypothetical
protein F49A5.2 protein.
Length = 379
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -2
Query: 466 WSNLSAVLLNFCLHSSM*QQYEGFFSAITAKYESWFSC 353
++N+ L CL S+ + GF+ + SWF C
Sbjct: 323 YNNIKRTLNGNCLFMSVSKHRRGFWYTVECTQRSWFLC 360
>Z81534-5|CAB04348.2| 694|Caenorhabditis elegans Hypothetical
protein F37H8.2 protein.
Length = 694
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 327 SPHFLDLHIQENHDSYFAVMAEKKPSYCCYIEECKQKF 440
S + ++L E H S F +K Y C ECK F
Sbjct: 367 SANEIELFFNEEHTSKFFGNYGQKSMYTCKFHECKASF 404
>Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical
protein C18D4.2b protein.
Length = 1376
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = -2
Query: 412 QQYEGFFSAITAKYESWFSCMCRSKKC 332
Q+ F KY+ W C C + KC
Sbjct: 165 QELTNIFGDSIEKYQEWIICRCENLKC 191
>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical
protein C18D4.2a protein.
Length = 1817
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = -2
Query: 412 QQYEGFFSAITAKYESWFSCMCRSKKC 332
Q+ F KY+ W C C + KC
Sbjct: 165 QELTNIFGDSIEKYQEWIICRCENLKC 191
>Z47074-2|CAA87377.2| 694|Caenorhabditis elegans Hypothetical
protein F37H8.2 protein.
Length = 694
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 327 SPHFLDLHIQENHDSYFAVMAEKKPSYCCYIEECKQKF 440
S + ++L E H S F +K Y C ECK F
Sbjct: 367 SANEIELFFNEEHTSKFFGNYGQKSMYTCKFHECKASF 404
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/64 (20%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 363 HDSYFAVMAEKKPSYCCYIEECKQKFNNTADRLDHCVRE--HRIPKDFRFERQKKDKNKM 536
HD + + + ++K Y +E K ++ D+L++ ++ + ++ ER+K+D ++
Sbjct: 1147 HDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEK 1206
Query: 537 PNAM 548
N++
Sbjct: 1207 INSL 1210
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/64 (20%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 363 HDSYFAVMAEKKPSYCCYIEECKQKFNNTADRLDHCVRE--HRIPKDFRFERQKKDKNKM 536
HD + + + ++K Y +E K ++ D+L++ ++ + ++ ER+K+D ++
Sbjct: 1220 HDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEK 1279
Query: 537 PNAM 548
N++
Sbjct: 1280 INSL 1283
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/64 (20%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 363 HDSYFAVMAEKKPSYCCYIEECKQKFNNTADRLDHCVRE--HRIPKDFRFERQKKDKNKM 536
HD + + + ++K Y +E K ++ D+L++ ++ + ++ ER+K+D ++
Sbjct: 1220 HDKHLSDLDDEKEQYGKAVENLKSVEDDLRDKLNNLEKQLADSLNRENELEREKRDYDEK 1279
Query: 537 PNAM 548
N++
Sbjct: 1280 INSL 1283
>U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical
protein C33G8.3 protein.
Length = 142
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +3
Query: 507 ERQKKDKNKMPNAMDVDEAKSNKFHLNNSKQKTFSKNK 620
+++KKDK K ++ + ++ K +K N+S ++ +NK
Sbjct: 97 DKKKKDKKKNKDSEEEEDKKKDKKKKNDSSDESEEENK 134
>U22832-3|AAA64508.2| 359|Caenorhabditis elegans Hypothetical
protein C09F5.3 protein.
Length = 359
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +3
Query: 267 ENHYNATHRYSCAQCKKVLPSPHFLDLHIQENHD 368
+ H Y CA C PS L H+Q +HD
Sbjct: 229 KQHSRQLIMYGCALCATSYPSQLHLITHVQMSHD 262
>AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical
protein Y111B2A.10b protein.
Length = 312
Score = 27.5 bits (58), Expect = 9.6
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +3
Query: 294 YSCAQCKKVLPSPHFLDLHIQENHD 368
++C C K P+ L +H + HD
Sbjct: 28 FTCVMCSKAFPNAEALQIHTDQVHD 52
>AL031635-11|CAA21038.3| 446|Caenorhabditis elegans Hypothetical
protein Y47D3B.3 protein.
Length = 446
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = -1
Query: 680 QSIFVSSPRFLVACEFLSCIFIFAKRLLFAIVQMEFIGLSLVYVHSVRHFVFILFLSFKT 501
+ +F+ FL++ +CI + +L+ +Q + + + V F F L L T
Sbjct: 11 RGLFIFGQNFLISKYLRTCISLLDPQLIDLKLQTRMVPVPATFAIIVSFFNFSLLLFNHT 70
Query: 500 KIFGYPVLS 474
I Y LS
Sbjct: 71 YISHYATLS 79
>AL031630-20|CAE17995.1| 122|Caenorhabditis elegans Hypothetical
protein Y38H6C.23 protein.
Length = 122
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -2
Query: 457 LSAVLLNFCLHSSM*QQYEGFFSAITAKYESWFSCMCRSKKCGEGR 320
+S+V++N C + YEG + I+A + + C K CG G+
Sbjct: 10 ISSVVINNC--DGVCLNYEGLGNVISALTDPLCNAWCEIKLCGPGK 53
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = +3
Query: 390 EKKPSYCCYIEECKQKFNNTADRLDHCVRE--HRIPKDFRFERQ---KKDKNKMPNAMDV 554
EKK C + + + N D L + ++ + +FE + +K K
Sbjct: 569 EKKTENCSECNDVRMEMNTVKDVLQNVQKQLKNMQQNSEQFETKLVASDNKTKNFEKQLE 628
Query: 555 DEAKSNKFHLNNSKQKTFSKNK 620
DE + N HL +S++ SKN+
Sbjct: 629 DERRKNNKHLESSRKTLISKNE 650
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = +3
Query: 390 EKKPSYCCYIEECKQKFNNTADRLDHCVRE--HRIPKDFRFERQ---KKDKNKMPNAMDV 554
EKK C + + + N D L + ++ + +FE + +K K
Sbjct: 603 EKKTENCSECNDVRMEMNTVKDVLQNVQKQLKNMQQNSEQFETKLVASDNKTKNFEKQLE 662
Query: 555 DEAKSNKFHLNNSKQKTFSKNK 620
DE + N HL +S++ SKN+
Sbjct: 663 DERRKNNKHLESSRKTLISKNE 684
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,136,264
Number of Sequences: 27780
Number of extensions: 403456
Number of successful extensions: 1561
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1557
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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