Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15b13
(642 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC830.08c |||Golgi membrane protein |Schizosaccharomyces pombe... 125 6e-30
SPBC30D10.09c |||HVA22/TB2/DP1 family protein|Schizosaccharomyce... 46 5e-06
SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|c... 35 0.011
SPBC21B10.07 |||glycosyl hydrolase family 16|Schizosaccharomyces... 29 0.57
SPAC20G8.04c |||mitochondrial electron transfer flavoprotein-ubi... 29 0.75
SPCC1840.12 ||SPCC965.02|OPT oligopeptide transporter family|Sch... 28 1.3
SPBC660.07 |ntp1||alpha,alpha-trehalase Ntp1|Schizosaccharomyces... 27 1.7
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 27 1.7
SPAC15A10.06 |||CPA1 sodium ion/proton antiporter|Schizosaccharo... 26 4.0
SPCC191.02c ||SPCC417.14c|acetyl-CoA ligase |Schizosaccharomyces... 26 5.3
SPAC869.04 |||formamidase-like protein|Schizosaccharomyces pombe... 26 5.3
SPCC74.09 |mug24||RNA-binding protein, rrm type|Schizosaccharomy... 25 7.0
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 25 7.0
SPBC27B12.03c |||lathosterol oxidase |Schizosaccharomyces pombe|... 25 7.0
SPBC1683.05 |||thiamine transporter |Schizosaccharomyces pombe|c... 25 9.3
SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA syntheta... 25 9.3
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 25 9.3
SPBC29B5.02c |isp4||OPT oligopeptide transporter family |Schizos... 25 9.3
>SPCC830.08c |||Golgi membrane protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 182
Score = 125 bits (301), Expect = 6e-30
Identities = 57/151 (37%), Positives = 94/151 (62%), Gaps = 2/151 (1%)
Frame = +2
Query: 53 YKDNIEQSLNDKSKPWTKYFEL--AEQKVGVNRLYIFLGLVAFTGLYLVFGFGAELICNS 226
++ ++Q++ D + +L E+ GV++LY+FL L+L +G L+ N
Sbjct: 3 FQVRVKQNMQDLDNRLAAFPQLNSLEKNFGVSKLYVFLTAAGIYALFLFLNWGGFLLTNL 62
Query: 227 IGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFV 406
+ F PA+ S+ A+E+ K DDT+WLTY++V + +++EY+S I+ + P+YWLLK IF+
Sbjct: 63 LAFAMPAFFSINAIETTNKADDTQWLTYYLVTSFLNVIEYWSQLILYYVPVYWLLKAIFL 122
Query: 407 IWCYLPTEYNGSLVIYYRIIRPYYQKHHGRI 499
IW LP ++NG+ +IY +IRPY H RI
Sbjct: 123 IWLALP-KFNGATIIYRHLIRPYITPHVIRI 152
>SPBC30D10.09c |||HVA22/TB2/DP1 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 217
Score = 46.0 bits (104), Expect = 5e-06
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 4/104 (3%)
Frame = +2
Query: 281 KDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYR 460
+++ + + YW VY C + E + W P Y K +F +W P G+ IY
Sbjct: 97 EEERRRLMAYWCVYGCVTAAESILGRFLSWVPFYSTSKIVFWLWLLNP-RTQGAAFIYAS 155
Query: 461 IIRPYYQKHHGRIDD----MANTANVQKLVKGANDKIESSMKKL 580
I P+ H I++ + Q LV A ++S + KL
Sbjct: 156 YISPFLSDHKAAINNFLEKLVQFTTRQPLVLNAWALVKSLIDKL 199
>SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 796
Score = 34.7 bits (76), Expect = 0.011
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Frame = +2
Query: 182 LYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYW--VVYACFSIVEYFSD 355
L LVFG LI IGF+ Y + +E PQ W T + +++ C I++
Sbjct: 654 LILVFG----LIYFIIGFLVYKYELIYQMEHPQHSTGELWSTIFLRMIFGCV-IMQLTMM 708
Query: 356 FIVGWFPLYWLLKCIFVIWCY-LPTEYNGSLVI--YYRIIRPYYQKHH 490
++ YWL IF + C+ + + YN S +I + + YY + H
Sbjct: 709 GLMSLRKAYWLSTVIFPLLCFTVISAYNFSTMIRSSMQFVSLYYIRTH 756
>SPBC21B10.07 |||glycosyl hydrolase family 16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 419
Score = 29.1 bits (62), Expect = 0.57
Identities = 23/94 (24%), Positives = 41/94 (43%)
Frame = -1
Query: 366 PTMKSEKYSTIEKQAYTTQYVSHFVSSSFCGDSRAFIDMYAGYTKPIELHINSAPKPNTK 187
P+ K++ YS +++ TT + F + + F+ Y +L + SA N
Sbjct: 122 PSYKAKTYSLVKEYKGTT-FFDGFDFMNITDPTHGFVQ-YLDRNSSAKLGLISANSSNV- 178
Query: 186 YKPVNATKPKKMYNLFTPTFCSASSKYFVHGLLL 85
+ A K Y+ P+ S++YF HGL +
Sbjct: 179 ---IMAADSKHNYSSGRPSIRLQSTQYFEHGLFI 209
>SPAC20G8.04c |||mitochondrial electron transfer
flavoprotein-ubiquinone
oxidoreductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 28.7 bits (61), Expect = 0.75
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 207 APKPNTKYKPVNATKPKKMYNLFTPTFCSASS 112
A K +KYKP+N KP + + PT S S+
Sbjct: 510 ATKSASKYKPINYPKPDNVLSFDIPTSVSRSA 541
>SPCC1840.12 ||SPCC965.02|OPT oligopeptide transporter
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 791
Score = 27.9 bits (59), Expect = 1.3
Identities = 20/100 (20%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
Frame = +2
Query: 131 VGVNRLYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTY 310
+G+ R +F L ++ + G ++ ++P+ +S AL D+D
Sbjct: 207 IGIGRAILF-NLCSYLSSFGWSGLALPILVYPPTLIWPSVLSSCALFKIFHDNDNTKACN 265
Query: 311 WVVYAC-FSIVEYFSDFIVGWFP--LYWLLKCI--FVIWC 415
W + + + + + FI WFP ++ L + ++ WC
Sbjct: 266 WTISRLRYFFIVFVASFIWYWFPDLIFPALSSLGAWISWC 305
>SPBC660.07 |ntp1||alpha,alpha-trehalase Ntp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 735
Score = 27.5 bits (58), Expect = 1.7
Identities = 9/35 (25%), Positives = 22/35 (62%)
Frame = +2
Query: 452 YYRIIRPYYQKHHGRIDDMANTANVQKLVKGANDK 556
+ ++RPY +K+H +++ + N Q++ + A D+
Sbjct: 409 FEHLLRPYMEKYHMTLEEFTHAYNYQQIHEPALDE 443
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 27.5 bits (58), Expect = 1.7
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3
Query: 577 FFHGTLDLVVRSLHQFLDISCVGHIIDTTMMLLVVRTNDTVVDHEGPVVF 428
FF+ TLD V +H+ L ++ V + TM + R V + E P+V+
Sbjct: 823 FFNATLDSVPNGMHELL-LNEVKSTSNQTMQSKIARLIFRVGNEENPLVY 871
>SPAC15A10.06 |||CPA1 sodium ion/proton
antiporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 26.2 bits (55), Expect = 4.0
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 74 SLNDKSKPWTKYFELAEQKVGVNRLYIFLGLVAFTGLYLVF 196
+++ K+K TKY ++ N ++I+LG+ FT + LV+
Sbjct: 307 NMSYKAKLSTKYVFRVLAQLSENFIFIYLGMSLFTQVDLVY 347
>SPCC191.02c ||SPCC417.14c|acetyl-CoA ligase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 662
Score = 25.8 bits (54), Expect = 5.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 8 G*PLKDRTMASKLQEYKDNIEQSLNDKSKPW 100
G P + + L EYK E+S+ND S W
Sbjct: 20 GDPTVPKPNIASLDEYKRMYEESINDPSTFW 50
>SPAC869.04 |||formamidase-like protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 410
Score = 25.8 bits (54), Expect = 5.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 326 CFSIVEYFSDFIVGWFPLYWLLKC 397
C ++EYF F + LY LL C
Sbjct: 337 CLRVIEYFRRFGYNDYQLYLLLSC 360
>SPCC74.09 |mug24||RNA-binding protein, rrm type|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 654
Score = 25.4 bits (53), Expect = 7.0
Identities = 14/68 (20%), Positives = 33/68 (48%)
Frame = +2
Query: 437 GSLVIYYRIIRPYYQKHHGRIDDMANTANVQKLVKGANDKIESSMKKLSDL*YPRGFVCN 616
G+L + Y+I H G ++ + + ++++ D ++ + +PRGF+ +
Sbjct: 213 GNLPVDYKISELLSLIHSGPLEKIQSNPGKRRIIITFLDSADAFF--FYERYHPRGFIFH 270
Query: 617 GNKIKMPF 640
G +K+ F
Sbjct: 271 GRPLKLTF 278
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 25.4 bits (53), Expect = 7.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 38 SKLQEYKDNIEQSLNDKSKPWTKYFE 115
+++ E D I++ LNDK K W F+
Sbjct: 53 NEMLEVMDIIDRRLNDKGKNWRHVFK 78
>SPBC27B12.03c |||lathosterol oxidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 329
Score = 25.4 bits (53), Expect = 7.0
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +2
Query: 308 YWVVYACFSIVEY--FSDFIVGWFPLYWLLKCIFVIWCYLP 424
Y Y FSI + FSDF++ YW+ + + W Y P
Sbjct: 146 YGYFYLFFSIALFLLFSDFLI-----YWIHRALHHRWLYAP 181
>SPBC1683.05 |||thiamine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 559
Score = 25.0 bits (52), Expect = 9.3
Identities = 11/28 (39%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = -2
Query: 119 LVQNISS-MACFCRSDFVLCCLYTLVIW 39
L+++IS+ +ACF F+LC + + V+W
Sbjct: 225 LIKSISTYIACFAMLIFLLCNVGSHVVW 252
>SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA synthetases
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 450
Score = 25.0 bits (52), Expect = 9.3
Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 2/91 (2%)
Frame = -1
Query: 366 PTMKSEKYSTIEKQAYTTQYVSHFVSSSFCGDSRAFIDMYAGYTKPIELHINSAPK--PN 193
P+M + IEK S +VS+ CGD+ + +G K I L K
Sbjct: 279 PSMIDFRIGFIEKAVKHPNADSLYVSTIHCGDAEGPRTVCSGLVKYIPLEQMQQRKVIVV 338
Query: 192 TKYKPVNATKPKKMYNLFTPTFCSASSKYFV 100
KPVN K +F + S FV
Sbjct: 339 ANLKPVNMRSVKSQAMVFCASSPDKSVVEFV 369
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.0 bits (52), Expect = 9.3
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 348 KYSTIEKQAYTTQYVSHFVSSSFCGDSRAF-IDMYAGYTKPIELHINSAPK 199
++S+IEK A+ QY SSSF D +F +D Y T P + IN K
Sbjct: 4463 QHSSIEKLAHYLQYEKKESSSSF--DIASFQLDEYLN-TLPSNIPINLVQK 4510
>SPBC29B5.02c |isp4||OPT oligopeptide transporter family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 785
Score = 25.0 bits (52), Expect = 9.3
Identities = 12/66 (18%), Positives = 30/66 (45%)
Frame = -1
Query: 384 QYNGNQPTMKSEKYSTIEKQAYTTQYVSHFVSSSFCGDSRAFIDMYAGYTKPIELHINSA 205
++ + P+ K EK +++ Y + +S D+++F+D+ G ++ +
Sbjct: 12 EHMNDSPSTK-EKADSVDISDYIVSHSDDSLSKDIKKDTKSFLDVEHGEISTVDEFEEDS 70
Query: 204 PKPNTK 187
P P +
Sbjct: 71 PYPEVR 76
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,837,814
Number of Sequences: 5004
Number of extensions: 63183
Number of successful extensions: 212
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 287744314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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