Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15b13
(642 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-1835|AAF58285.1| 178|Drosophila melanogaster CG8331-PA... 210 2e-54
AY069293-1|AAL39438.1| 178|Drosophila melanogaster GM14577p pro... 208 5e-54
AE014297-3850|AAF56507.1| 174|Drosophila melanogaster CG4960-PA... 192 3e-49
AY075300-1|AAL68167.2| 145|Drosophila melanogaster AT31258p pro... 169 4e-42
BT001599-1|AAN71354.1| 288|Drosophila melanogaster RE29641p pro... 85 8e-17
AE013599-3509|AAN16116.1| 288|Drosophila melanogaster CG30193-P... 85 8e-17
AE013599-3508|AAN16115.1| 288|Drosophila melanogaster CG30193-P... 85 8e-17
AE013599-3507|AAM68230.1| 288|Drosophila melanogaster CG30193-P... 85 8e-17
AE013599-3506|AAM68229.1| 288|Drosophila melanogaster CG30193-P... 85 8e-17
AE013599-3505|AAM68228.1| 288|Drosophila melanogaster CG30193-P... 85 8e-17
AY094833-1|AAM11186.1| 435|Drosophila melanogaster LD42159p pro... 84 1e-16
AE013599-3510|AAM68231.1| 435|Drosophila melanogaster CG30193-P... 84 1e-16
AY094629-1|AAM10982.1| 296|Drosophila melanogaster AT01776p pro... 59 4e-09
AE013599-3688|AAF47063.2| 296|Drosophila melanogaster CG5539-PA... 59 4e-09
BT022651-1|AAY55067.1| 271|Drosophila melanogaster IP07718p pro... 56 4e-08
AE014298-1640|AAF48060.1| 240|Drosophila melanogaster CG11697-P... 56 4e-08
BT012313-1|AAS77438.1| 206|Drosophila melanogaster LP05237p pro... 44 2e-04
AE013599-3686|AAM68270.1| 206|Drosophila melanogaster CG30177-P... 44 2e-04
AE014298-1550|AAF47996.2| 557|Drosophila melanogaster CG1961-PA... 36 0.047
AF145684-1|AAD38659.1| 1658|Drosophila melanogaster BcDNA.LD2387... 29 7.1
AE014297-845|AAF54313.1| 1658|Drosophila melanogaster CG11970-PA... 29 7.1
AE014296-2961|AAF49305.2| 1526|Drosophila melanogaster CG32186-P... 29 7.1
>AE013599-1835|AAF58285.1| 178|Drosophila melanogaster CG8331-PA
protein.
Length = 178
Score = 210 bits (512), Expect = 2e-54
Identities = 83/153 (54%), Positives = 113/153 (73%)
Frame = +2
Query: 44 LQEYKDNIEQSLNDKSKPWTKYFELAEQKVGVNRLYIFLGLVAFTGLYLVFGFGAELICN 223
L YKD++ +SL D SKPWTK F+ E+K GV+R+ IF+G V +YL+FG+GA+L+CN
Sbjct: 9 LNGYKDDVSKSLRDASKPWTKVFDTVEEKTGVDRVNIFVGAVGLCAIYLIFGWGAQLLCN 68
Query: 224 SIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIF 403
IG +YPAY+S+ A+ES K DDTKWL YWV + F+++E+FS + P YWLLKC F
Sbjct: 69 IIGVLYPAYISIHAIESSTKQDDTKWLIYWVTFGIFTVIEFFSSLLTSVIPFYWLLKCAF 128
Query: 404 VIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 502
+IWC LPTE NGS +IY +++RPY+ KHH +D
Sbjct: 129 LIWCMLPTEQNGSTIIYNKLVRPYFLKHHESVD 161
>AY069293-1|AAL39438.1| 178|Drosophila melanogaster GM14577p
protein.
Length = 178
Score = 208 bits (508), Expect = 5e-54
Identities = 83/153 (54%), Positives = 112/153 (73%)
Frame = +2
Query: 44 LQEYKDNIEQSLNDKSKPWTKYFELAEQKVGVNRLYIFLGLVAFTGLYLVFGFGAELICN 223
L YKD++ +SL D SKPWTK F+ E+K GV+R+ IF+G V +YL+FG GA+L+CN
Sbjct: 9 LNGYKDDVSKSLRDASKPWTKVFDTVEEKTGVDRVNIFVGAVGLCAIYLIFGGGAQLLCN 68
Query: 224 SIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIF 403
IG +YPAY+S+ A+ES K DDTKWL YWV + F+++E+FS + P YWLLKC F
Sbjct: 69 IIGVLYPAYISIHAIESSTKQDDTKWLIYWVTFGIFTVIEFFSSLLTSVIPFYWLLKCAF 128
Query: 404 VIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 502
+IWC LPTE NGS +IY +++RPY+ KHH +D
Sbjct: 129 LIWCMLPTEQNGSTIIYNKLVRPYFLKHHESVD 161
>AE014297-3850|AAF56507.1| 174|Drosophila melanogaster CG4960-PA
protein.
Length = 174
Score = 192 bits (468), Expect = 3e-49
Identities = 77/153 (50%), Positives = 108/153 (70%)
Frame = +2
Query: 53 YKDNIEQSLNDKSKPWTKYFELAEQKVGVNRLYIFLGLVAFTGLYLVFGFGAELICNSIG 232
YK +I +SL D SKPWTK F+ E+K GV R+ IF+G + F YLVFG+ A+L+CN IG
Sbjct: 15 YKQDINRSLRDASKPWTKAFDSLEEKTGVERVNIFVGSILFCAFYLVFGWCAQLLCNIIG 74
Query: 233 FVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIW 412
+YPAY+S+ +ES K DD +WL YWV + F+++E++ + P YWLLKC F+IW
Sbjct: 75 VLYPAYISIHGIESSTKQDDIRWLIYWVTFGIFTVIEFYPSLLTSMIPFYWLLKCTFLIW 134
Query: 413 CYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMA 511
C LPTE NGS +IY++++RPY+ K H +D M+
Sbjct: 135 CMLPTERNGSTLIYHKLVRPYFLKLHDPVDMMS 167
>AY075300-1|AAL68167.2| 145|Drosophila melanogaster AT31258p
protein.
Length = 145
Score = 169 bits (410), Expect = 4e-42
Identities = 67/138 (48%), Positives = 96/138 (69%)
Frame = +2
Query: 98 WTKYFELAEQKVGVNRLYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESP 277
WTK F+ E+K GV R+ IF+G + F YLVFG+ A+L+CN IG +YPAY+S+ +ES
Sbjct: 1 WTKAFDSLEEKTGVERVNIFVGSILFCAFYLVFGWCAQLLCNIIGVLYPAYISIHGIESS 60
Query: 278 QKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYY 457
K DD +WL YWV + F+++E++ + P YWLLKC F+IWC LPTE NGS +IY+
Sbjct: 61 TKQDDIRWLIYWVTFGIFTVIEFYPSLLTSMIPFYWLLKCTFLIWCMLPTERNGSTLIYH 120
Query: 458 RIIRPYYQKHHGRIDDMA 511
+++RPY+ K +D M+
Sbjct: 121 KLVRPYFLKLPEPVDMMS 138
>BT001599-1|AAN71354.1| 288|Drosophila melanogaster RE29641p
protein.
Length = 288
Score = 85.0 bits (201), Expect = 8e-17
Identities = 36/105 (34%), Positives = 55/105 (52%)
Frame = +2
Query: 206 AELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYW 385
+ LI G +YPAY S KA+ + + KW+ YW+V+A F+ +E F+D + W P Y+
Sbjct: 7 SRLIILFCGTLYPAYASYKAVRTKDVKEYVKWMMYWIVFAFFTCIETFTDIFISWLPFYY 66
Query: 386 LLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMANTA 520
+K V W P GS +Y + + P +H ID+ N A
Sbjct: 67 EVKVALVFWLLSPAT-KGSSTLYRKFVHPMLTRHEQEIDEYVNQA 110
>AE013599-3509|AAN16116.1| 288|Drosophila melanogaster CG30193-PF,
isoform F protein.
Length = 288
Score = 85.0 bits (201), Expect = 8e-17
Identities = 36/105 (34%), Positives = 55/105 (52%)
Frame = +2
Query: 206 AELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYW 385
+ LI G +YPAY S KA+ + + KW+ YW+V+A F+ +E F+D + W P Y+
Sbjct: 7 SRLIILFCGTLYPAYASYKAVRTKDVKEYVKWMMYWIVFAFFTCIETFTDIFISWLPFYY 66
Query: 386 LLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMANTA 520
+K V W P GS +Y + + P +H ID+ N A
Sbjct: 67 EVKVALVFWLLSPAT-KGSSTLYRKFVHPMLTRHEQEIDEYVNQA 110
>AE013599-3508|AAN16115.1| 288|Drosophila melanogaster CG30193-PE,
isoform E protein.
Length = 288
Score = 85.0 bits (201), Expect = 8e-17
Identities = 36/105 (34%), Positives = 55/105 (52%)
Frame = +2
Query: 206 AELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYW 385
+ LI G +YPAY S KA+ + + KW+ YW+V+A F+ +E F+D + W P Y+
Sbjct: 7 SRLIILFCGTLYPAYASYKAVRTKDVKEYVKWMMYWIVFAFFTCIETFTDIFISWLPFYY 66
Query: 386 LLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMANTA 520
+K V W P GS +Y + + P +H ID+ N A
Sbjct: 67 EVKVALVFWLLSPAT-KGSSTLYRKFVHPMLTRHEQEIDEYVNQA 110
>AE013599-3507|AAM68230.1| 288|Drosophila melanogaster CG30193-PC,
isoform C protein.
Length = 288
Score = 85.0 bits (201), Expect = 8e-17
Identities = 36/105 (34%), Positives = 55/105 (52%)
Frame = +2
Query: 206 AELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYW 385
+ LI G +YPAY S KA+ + + KW+ YW+V+A F+ +E F+D + W P Y+
Sbjct: 7 SRLIILFCGTLYPAYASYKAVRTKDVKEYVKWMMYWIVFAFFTCIETFTDIFISWLPFYY 66
Query: 386 LLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMANTA 520
+K V W P GS +Y + + P +H ID+ N A
Sbjct: 67 EVKVALVFWLLSPAT-KGSSTLYRKFVHPMLTRHEQEIDEYVNQA 110
>AE013599-3506|AAM68229.1| 288|Drosophila melanogaster CG30193-PB,
isoform B protein.
Length = 288
Score = 85.0 bits (201), Expect = 8e-17
Identities = 36/105 (34%), Positives = 55/105 (52%)
Frame = +2
Query: 206 AELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYW 385
+ LI G +YPAY S KA+ + + KW+ YW+V+A F+ +E F+D + W P Y+
Sbjct: 7 SRLIILFCGTLYPAYASYKAVRTKDVKEYVKWMMYWIVFAFFTCIETFTDIFISWLPFYY 66
Query: 386 LLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMANTA 520
+K V W P GS +Y + + P +H ID+ N A
Sbjct: 67 EVKVALVFWLLSPAT-KGSSTLYRKFVHPMLTRHEQEIDEYVNQA 110
>AE013599-3505|AAM68228.1| 288|Drosophila melanogaster CG30193-PA,
isoform A protein.
Length = 288
Score = 85.0 bits (201), Expect = 8e-17
Identities = 36/105 (34%), Positives = 55/105 (52%)
Frame = +2
Query: 206 AELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYW 385
+ LI G +YPAY S KA+ + + KW+ YW+V+A F+ +E F+D + W P Y+
Sbjct: 7 SRLIILFCGTLYPAYASYKAVRTKDVKEYVKWMMYWIVFAFFTCIETFTDIFISWLPFYY 66
Query: 386 LLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMANTA 520
+K V W P GS +Y + + P +H ID+ N A
Sbjct: 67 EVKVALVFWLLSPAT-KGSSTLYRKFVHPMLTRHEQEIDEYVNQA 110
>AY094833-1|AAM11186.1| 435|Drosophila melanogaster LD42159p
protein.
Length = 435
Score = 84.2 bits (199), Expect = 1e-16
Identities = 34/97 (35%), Positives = 52/97 (53%)
Frame = +2
Query: 230 GFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVI 409
G +YPAY S KA+ + + KW+ YW+V+A F+ +E F+D + W P Y+ +K V
Sbjct: 162 GTLYPAYASYKAVRTKDVKEYVKWMMYWIVFAFFTCIETFTDIFISWLPFYYEVKVALVF 221
Query: 410 WCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMANTA 520
W P GS +Y + + P +H ID+ N A
Sbjct: 222 WLLSPAT-KGSSTLYRKFVHPMLTRHEQEIDEYVNQA 257
>AE013599-3510|AAM68231.1| 435|Drosophila melanogaster CG30193-PD,
isoform D protein.
Length = 435
Score = 84.2 bits (199), Expect = 1e-16
Identities = 34/97 (35%), Positives = 52/97 (53%)
Frame = +2
Query: 230 GFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVI 409
G +YPAY S KA+ + + KW+ YW+V+A F+ +E F+D + W P Y+ +K V
Sbjct: 162 GTLYPAYASYKAVRTKDVKEYVKWMMYWIVFAFFTCIETFTDIFISWLPFYYEVKVALVF 221
Query: 410 WCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMANTA 520
W P GS +Y + + P +H ID+ N A
Sbjct: 222 WLLSPAT-KGSSTLYRKFVHPMLTRHEQEIDEYVNQA 257
>AY094629-1|AAM10982.1| 296|Drosophila melanogaster AT01776p
protein.
Length = 296
Score = 59.3 bits (137), Expect = 4e-09
Identities = 34/118 (28%), Positives = 54/118 (45%)
Frame = +2
Query: 194 FGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWF 373
FG ++ + G + PA+ + K L S ++ W YW+VYA E +D + W
Sbjct: 4 FGLVSQFLFFVYGTMGPAWQTYKTLNSGD-EEFLAWAKYWIVYAFLVTFEVLADVFLSWL 62
Query: 374 PLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMANTANVQKLVKGA 547
PLY K + V+W L ++ I+ I+RP K ID + +KL+ A
Sbjct: 63 PLYMPTKLLLVVWIVLSAP-AANVWIFDAILRPVLAKRQEEIDHFLHRGK-EKLLNDA 118
>AE013599-3688|AAF47063.2| 296|Drosophila melanogaster CG5539-PA
protein.
Length = 296
Score = 59.3 bits (137), Expect = 4e-09
Identities = 32/115 (27%), Positives = 52/115 (45%)
Frame = +2
Query: 194 FGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWF 373
FG ++ + G + PA+ + K L S ++ W YW+VYA E +D + W
Sbjct: 4 FGLVSQFLFFVYGTMGPAWQTYKTLNSGD-EEFLAWAKYWIVYAFLVTFEVLADVFLSWL 62
Query: 374 PLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMANTANVQKLV 538
PLY K + V+W L ++ I+ I+RP K ID + + L+
Sbjct: 63 PLYMPTKLLLVVWIVLSAP-AANVWIFDAILRPVLAKRQEEIDHFLHRGKEKLLI 116
>BT022651-1|AAY55067.1| 271|Drosophila melanogaster IP07718p
protein.
Length = 271
Score = 56.0 bits (129), Expect = 4e-08
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +2
Query: 188 LVFGFGAELICNSIGFVYPAYMSMKALESPQ--KDDDTKWLTYWVVYACFSIVEYFSDFI 361
+++ ++ +G YPA+ S K L+S +D WL YW+ Y + +YF+ +
Sbjct: 32 MIYAIVIHILSLLVGCFYPAFASYKILKSQNCSVNDLRGWLIYWIAYGVYVAFDYFTAGL 91
Query: 362 VGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPY 475
+ + PL K + + W LP+ GS VIY +R +
Sbjct: 92 LAFIPLLSEFKVLLLFW-MLPSVGGGSEVIYEEFLRSF 128
>AE014298-1640|AAF48060.1| 240|Drosophila melanogaster CG11697-PA
protein.
Length = 240
Score = 56.0 bits (129), Expect = 4e-08
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +2
Query: 188 LVFGFGAELICNSIGFVYPAYMSMKALESPQ--KDDDTKWLTYWVVYACFSIVEYFSDFI 361
+++ ++ +G YPA+ S K L+S +D WL YW+ Y + +YF+ +
Sbjct: 1 MIYAIVIHILSLLVGCFYPAFASYKILKSQNCSVNDLRGWLIYWIAYGVYVAFDYFTAGL 60
Query: 362 VGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPY 475
+ + PL K + + W LP+ GS VIY +R +
Sbjct: 61 LAFIPLLSEFKVLLLFW-MLPSVGGGSEVIYEEFLRSF 97
>BT012313-1|AAS77438.1| 206|Drosophila melanogaster LP05237p
protein.
Length = 206
Score = 44.0 bits (99), Expect = 2e-04
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +2
Query: 230 GFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVI 409
G + P + S++A+ Q+ WL YWV+YA + +DF++G Y LK I +
Sbjct: 10 GTLLPGWSSLRAIGHDQRHFIELWLKYWVIYALLQGLGVLTDFLLGGLSFYAGLKLILSV 69
Query: 410 WCYLPTEYN 436
+ Y+
Sbjct: 70 GLWFSAPYS 78
>AE013599-3686|AAM68270.1| 206|Drosophila melanogaster CG30177-PA
protein.
Length = 206
Score = 44.0 bits (99), Expect = 2e-04
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +2
Query: 230 GFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVI 409
G + P + S++A+ Q+ WL YWV+YA + +DF++G Y LK I +
Sbjct: 10 GTLLPGWSSLRAIGHDQRHFIELWLKYWVIYALLQGLGVLTDFLLGGLSFYAGLKLILSV 69
Query: 410 WCYLPTEYN 436
+ Y+
Sbjct: 70 GLWFSAPYS 78
>AE014298-1550|AAF47996.2| 557|Drosophila melanogaster CG1961-PA
protein.
Length = 557
Score = 35.9 bits (79), Expect = 0.047
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = -3
Query: 559 DLVVRSLHQFLDISCVGHIIDTTMMLLVVRTNDTVVDHEGPVVFSRQVAPDHEDAL*QPV 380
+++ S H+ L + + +++ N V+D+EG ++ Q P+ E+ L
Sbjct: 272 EVIHSSGHRVLIVQASAYARYVGNLIVYFDDNGDVLDYEGDPLYMDQSVPEDEEVLVAMQ 331
Query: 379 QWKPADDEIGKVL 341
WK DE GKV+
Sbjct: 332 PWKEVIDETGKVV 344
>AF145684-1|AAD38659.1| 1658|Drosophila melanogaster BcDNA.LD23876
protein.
Length = 1658
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 273 DSRAFIDMYAGYTKPIELHINSAPKPNTKYKPVNATKPKKMYNLF 139
+ R +D A + EL AP+P +P NA K +YN F
Sbjct: 314 ECRQLMDRLAKGPQEFELEETKAPEPAGPGRPSNAADKKCIYNTF 358
>AE014297-845|AAF54313.1| 1658|Drosophila melanogaster CG11970-PA
protein.
Length = 1658
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 273 DSRAFIDMYAGYTKPIELHINSAPKPNTKYKPVNATKPKKMYNLF 139
+ R +D A + EL AP+P +P NA K +YN F
Sbjct: 314 ECRQLMDRLAKGPQEFELEETKAPEPAGPGRPSNAADKKCIYNTF 358
>AE014296-2961|AAF49305.2| 1526|Drosophila melanogaster CG32186-PA
protein.
Length = 1526
Score = 28.7 bits (61), Expect = 7.1
Identities = 21/94 (22%), Positives = 38/94 (40%)
Frame = +2
Query: 182 LYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFI 361
+Y++ +I S + MK L Q+ + +TYW+ + F +V +F +
Sbjct: 872 IYVIGYVSIAMIIFSSAVIQERVSHMKML---QEVSGLEMITYWLSHLAFDMVVFFILVL 928
Query: 362 VGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRI 463
PLY ++ T G + IY+ I
Sbjct: 929 ALLLPLYGYAPWYLLLCVLFFTGLAGLIFIYFLI 962
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,177,385
Number of Sequences: 53049
Number of extensions: 678447
Number of successful extensions: 2042
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2042
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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