Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15b11
         (249 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058605-1|AAL13834.1|  585|Drosophila melanogaster LD29807p pro...    28   2.0  
AE014134-1406|AAF52606.2|  585|Drosophila melanogaster CG8668-PA...    28   2.0  
AE013599-762|AAF59007.1|  746|Drosophila melanogaster CG8181-PA ...    28   2.0  
AE013599-914|AAM68791.1|  371|Drosophila melanogaster CG30004-PA...    27   2.6  
BT011075-1|AAR82740.1|  465|Drosophila melanogaster SD09672p pro...    27   4.6  
AF301149-1|AAG15387.1|  764|Drosophila melanogaster SR protein k...    27   4.6  
AE013599-2053|AAM68537.1|  764|Drosophila melanogaster CG8174-PB...    27   4.6  
AE013599-2052|AAF58140.2|  764|Drosophila melanogaster CG8174-PA...    27   4.6  

>AY058605-1|AAL13834.1|  585|Drosophila melanogaster LD29807p
           protein.
          Length = 585

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
 Frame = +2

Query: 65  PPVKTTATAMPTAPIVHQR---QETAAN-GHLKETFENDPFC 178
           PPVKTT + +P+AP+   +    ET    GH+ E  + +  C
Sbjct: 292 PPVKTTKSKVPSAPVDPSKGVATETLYEPGHVDEEIDAERIC 333


>AE014134-1406|AAF52606.2|  585|Drosophila melanogaster CG8668-PA
           protein.
          Length = 585

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
 Frame = +2

Query: 65  PPVKTTATAMPTAPIVHQR---QETAAN-GHLKETFENDPFC 178
           PPVKTT + +P+AP+   +    ET    GH+ E  + +  C
Sbjct: 292 PPVKTTKSKVPSAPVDPSKGVATETLYEPGHVDEEIDAERIC 333


>AE013599-762|AAF59007.1|  746|Drosophila melanogaster CG8181-PA
           protein.
          Length = 746

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
 Frame = +2

Query: 65  PPVKTTATAMP---TAPIVHQRQETAA 136
           PP + T TA P   TAPIV QR ET +
Sbjct: 158 PPRRRTTTAKPVLTTAPIVEQRIETTS 184


>AE013599-914|AAM68791.1|  371|Drosophila melanogaster CG30004-PA
           protein.
          Length = 371

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 239 NIDHNCLLSIIIKYTSRVLKNKTGRFQMFPLD 144
           N   +CLL ++ KY    ++N  GR Q   +D
Sbjct: 295 NTTKDCLLHLLEKYNETRIRNPVGRHQSISVD 326


>BT011075-1|AAR82740.1|  465|Drosophila melanogaster SD09672p
           protein.
          Length = 465

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 65  PPVKTTATAMPTAPIVHQRQETAANGHLKETFENDPF 175
           PP KT A A P     HQ+Q   ++ +  E++E++ F
Sbjct: 106 PPKKTQAKAKPNTQKEHQQQPPRSSSN--ESYESETF 140


>AF301149-1|AAG15387.1|  764|Drosophila melanogaster SR protein
           kinase 1 protein.
          Length = 764

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 65  PPVKTTATAMPTAPIVHQRQETAANGHLKETFENDPF 175
           PP KT A A P     HQ+Q   ++ +  E++E++ F
Sbjct: 106 PPKKTQAKAKPNTQKEHQQQPPRSSSN--ESYESETF 140


>AE013599-2053|AAM68537.1|  764|Drosophila melanogaster CG8174-PB,
           isoform B protein.
          Length = 764

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 65  PPVKTTATAMPTAPIVHQRQETAANGHLKETFENDPF 175
           PP KT A A P     HQ+Q   ++ +  E++E++ F
Sbjct: 106 PPKKTQAKAKPNTQKEHQQQPPRSSSN--ESYESETF 140


>AE013599-2052|AAF58140.2|  764|Drosophila melanogaster CG8174-PA,
           isoform A protein.
          Length = 764

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 65  PPVKTTATAMPTAPIVHQRQETAANGHLKETFENDPF 175
           PP KT A A P     HQ+Q   ++ +  E++E++ F
Sbjct: 106 PPKKTQAKAKPNTQKEHQQQPPRSSSN--ESYESETF 140


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,245,735
Number of Sequences: 53049
Number of extensions: 153297
Number of successful extensions: 508
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 24,988,368
effective HSP length: 62
effective length of database: 21,699,330
effective search space used: 433986600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)