Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15b08
         (525 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   2.5  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   7.7  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   7.7  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   7.7  

>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 12/36 (33%), Positives = 14/36 (38%)
 Frame = -2

Query: 311 PHRIH*KSHKFHYLLRMHLIESMLSFKISISHTRHH 204
           PH  H  +   H+     L  S     I I HT HH
Sbjct: 430 PHHHHSHAATPHHQHSTPLAHSSYPAAIQIGHTPHH 465



 Score = 21.8 bits (44), Expect = 4.4
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +1

Query: 442 HHHPHVP 462
           HHHPH P
Sbjct: 464 HHHPHPP 470


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 485 SFPNALDHDTQEE 523
           SFP A D D++EE
Sbjct: 19  SFPGAHDEDSKEE 31


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 485 SFPNALDHDTQEE 523
           SFP A D D++EE
Sbjct: 19  SFPGAHDEDSKEE 31


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 485 SFPNALDHDTQEE 523
           SFP A D D++EE
Sbjct: 19  SFPGAHDEDSKEE 31


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,252
Number of Sequences: 438
Number of extensions: 2288
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)