Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15a16
(321 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 31 0.14
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 31 0.18
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 31 0.24
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 30 0.32
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 29 0.56
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 29 0.56
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 0.56
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 0.99
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 28 1.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 1.7
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 27 4.0
CU457741-9|CAM36350.2| 252|Caenorhabditis elegans Hypothetical ... 27 4.0
AF016415-3|AAW88418.1| 658|Caenorhabditis elegans Hypothetical ... 27 4.0
Z81544-6|CAI46607.1| 376|Caenorhabditis elegans Hypothetical pr... 26 5.3
U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical p... 26 5.3
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 26 5.3
U39653-4|AAL56624.1| 649|Caenorhabditis elegans Prion-like-(q/n... 26 5.3
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z50794-6|CAA90659.2| 388|Caenorhabditis elegans Hypothetical pr... 26 7.0
U80838-7|AAC71112.3| 581|Caenorhabditis elegans Hypothetical pr... 26 7.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 26 7.0
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 26 7.0
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 26 7.0
AF039046-14|AAB94214.1| 388|Caenorhabditis elegans Prion-like-(... 26 7.0
AC006676-3|AAK71381.3| 157|Caenorhabditis elegans Hypothetical ... 26 7.0
U70845-1|AAB09098.1| 79|Caenorhabditis elegans Hypothetical pr... 25 9.2
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 25 9.2
U23519-9|ABS19470.1| 203|Caenorhabditis elegans Hypothetical pr... 25 9.2
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 25 9.2
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 25 9.2
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 31.5 bits (68), Expect = 0.14
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 7/50 (14%)
Frame = +1
Query: 79 PPVCSPPDCRPI-------CGPASPLLCQSSVPPTQRCYPVNPCINIYSC 207
P C+ P+CRP+ CG PL ++ + T C P++ C Y C
Sbjct: 1255 PVKCTTPECRPVAKCIPNMCGTGEPLALENHLLAT--CSPISSCPAGYHC 1302
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 31.1 bits (67), Expect = 0.18
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 82 PVCSPPDCRPICGPASPLLCQSSVPPTQRCYPVNPC 189
P C P C+P C PL Q+ VP +C P PC
Sbjct: 374 PSCMPA-CQPSCTNPVPLTTQAPVPVVNQCIP--PC 406
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 30.7 bits (66), Expect = 0.24
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +1
Query: 73 YXPPVCSPPDCRPICGPASPLLCQSSVPPTQRCYP 177
Y P +P C+P C PA C P +C P
Sbjct: 119 YTPTTPAPVQCQPSCMPACEQSCVVQTPAAVQCVP 153
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 30.3 bits (65), Expect = 0.32
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +1
Query: 73 YXPPVCSPPDCRPICGPASPLLCQSSVPPTQRCYP 177
Y P +P C+P C PA C P +C P
Sbjct: 119 YTPTTPAPVQCQPSCMPACEQSCVVQTPAPVQCVP 153
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 29.5 bits (63), Expect = 0.56
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 91 SPPDCRPICGPASPLLCQSSVPPTQRCYP 177
+P C+P C PA C + P T +C P
Sbjct: 124 APVQCQPSCMPACEQSCVAPAPVTVQCVP 152
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 29.5 bits (63), Expect = 0.56
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 91 SPPDCRPICGPASPLLCQSSVPPTQRCYP 177
+P C+P C PA C + P T +C P
Sbjct: 125 APVQCQPSCMPACEQSCVAPAPVTVQCVP 153
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 0.56
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 88 CSPPDCRPICGPASPLLCQSSVPPTQRCYPVNPC 189
C PP+ +P C C +SVPP R P PC
Sbjct: 200 CCPPE-QPCCPELKLDNCLASVPPCLRACPSCPC 232
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.7 bits (61), Expect = 0.99
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +1
Query: 82 PVCSPPDCRPICGPASPLLCQSSVPPTQRCYPVNPCINIYSC 207
PVC PP P P +C PP C P P + SC
Sbjct: 52 PVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRPSC 93
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 79 PPVCSPPDCRPI-CGPASPLLCQSSVP 156
PP+C PP P+ C P P + + S P
Sbjct: 68 PPICPPPPPPPMPCPPPPPPMPRPSCP 94
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 28.3 bits (60), Expect = 1.3
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 82 PVCSPPDCRPICGPASPLLCQSSVP 156
P C PP P C P++P++ P
Sbjct: 121 PACPPPCFGPACAPSAPIIVNGPPP 145
Score = 27.5 bits (58), Expect = 2.3
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +1
Query: 82 PVCSPPDCRPICGPASPLLCQSSVP 156
P C PP P C P +P++ P
Sbjct: 93 PACPPPCFGPACAPPAPIIVNGPPP 117
Score = 26.2 bits (55), Expect = 5.3
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +1
Query: 82 PVCSPPDCRPICGPASPLLCQSSVP 156
P C PP P C P +P++ P
Sbjct: 65 PACPPPCFGPACVPLAPIIVNGPPP 89
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 27.9 bits (59), Expect = 1.7
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +1
Query: 79 PPVCSPPDCRPICGPASPLLC-QSSVPPTQRCYPVNPC 189
PP C PP P+C P PL C + P Q C P C
Sbjct: 27 PPPCPPPP-PPMCAP-PPLPCPPPPICPPQFCPPPPMC 62
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +1
Query: 79 PPVCSPPDCRPICGPA-SPLLCQSSVPPTQRCYPVNPCINI 198
PP + P C P P SPL+C P P NPC I
Sbjct: 113 PPAPAAPCCPPPPPPTPSPLVCCKQAP-----VPENPCCQI 148
>CU457741-9|CAM36350.2| 252|Caenorhabditis elegans Hypothetical
protein C42C1.9 protein.
Length = 252
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/50 (24%), Positives = 26/50 (52%)
Frame = +3
Query: 165 TVLSCKSLHQHIQLLHSNYVTQWTISIVNLKMVRNTHLFCKMYSKLVANK 314
T + + + + LHSN V +++ N+ ++++ FC + S+ A K
Sbjct: 115 TAVIVRDIANALLQLHSNQVLHGAVTLENIFLMKDEPSFCLLTSRSHARK 164
>AF016415-3|AAW88418.1| 658|Caenorhabditis elegans Hypothetical
protein C02A12.8 protein.
Length = 658
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/63 (22%), Positives = 33/63 (52%)
Frame = +3
Query: 120 TCISAPLPEQRATNTTVLSCKSLHQHIQLLHSNYVTQWTISIVNLKMVRNTHLFCKMYSK 299
T ++A + + + + +L+ K+L + + Y+ W I + L N+++FC + +
Sbjct: 275 TVVTAFIIKLESESNQILNSKTLSYIGDISYVMYLVHWPIISIFLSSNVNSYVFCVVTTI 334
Query: 300 LVA 308
LV+
Sbjct: 335 LVS 337
>Z81544-6|CAI46607.1| 376|Caenorhabditis elegans Hypothetical
protein F49C5.9 protein.
Length = 376
Score = 26.2 bits (55), Expect = 5.3
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 120 TCISAPLPEQRATNTTVLSCKSLHQHIQLLHSNY 221
TC S P P R+ N+T S S+ +HI H NY
Sbjct: 339 TCTS-PSPHPRSANSTSSSSMSVIEHIMRRH-NY 370
>U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical
protein C43E11.11 protein.
Length = 656
Score = 26.2 bits (55), Expect = 5.3
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +2
Query: 107 VRSVDLHLRSFARAACHQH 163
+ +D+H+ +RA CH H
Sbjct: 483 INHIDMHMAHVSRAVCHSH 501
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 103 CRPICGPASPLLCQSSVPPTQRCYP 177
C P C P+ C S+ P Q+CYP
Sbjct: 306 CLPACMPSCTSSCVQSMCP-QQCYP 329
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +1
Query: 94 PPDCRPICGPASPLLCQSSVPPT--QRCYPV 180
P +C P C P+ C V P+ Q+C PV
Sbjct: 126 PTECAPQCMPSCSSNCIQQVFPSCPQQCQPV 156
>U39653-4|AAL56624.1| 649|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform b protein.
Length = 649
Score = 26.2 bits (55), Expect = 5.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 261 PFLNSL*KSSIALHNLSVTAVYVDARIYRI 172
PFLN L SS+ LH L ++V R+
Sbjct: 351 PFLNKLHTSSVPLHRLPRQTIFVQNSTVRL 380
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 25.8 bits (54), Expect = 7.0
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +1
Query: 88 CSPPDCRPICGPASPLLCQSSVP 156
C PP P+C P P C +P
Sbjct: 241 CLPPPPSPVCMPPPPPPCPMPIP 263
>Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical
protein F07H5.8 protein.
Length = 872
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +1
Query: 103 CRPICGPASPLLCQSSVPPTQRCYP 177
C P C PA C +V T+ C P
Sbjct: 298 CIPACQPACTPQCVQAVTTTETCIP 322
>Z50794-6|CAA90659.2| 388|Caenorhabditis elegans Hypothetical
protein F59F5.5 protein.
Length = 388
Score = 25.8 bits (54), Expect = 7.0
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +1
Query: 103 CRPICGPASPLLCQSSVPPTQRCYPVNPC 189
C+ + G P+ C PP ++C N C
Sbjct: 16 CKTVNGKVDPVNCDCKSPPNEQC-SANAC 43
>U80838-7|AAC71112.3| 581|Caenorhabditis elegans Hypothetical
protein F47F6.3 protein.
Length = 581
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/55 (20%), Positives = 29/55 (52%)
Frame = +3
Query: 120 TCISAPLPEQRATNTTVLSCKSLHQHIQLLHSNYVTQWTISIVNLKMVRNTHLFC 284
T ++A + + ++ + +L+ K+L + + Y+ W + + L N+++FC
Sbjct: 198 TVVTAFIIKLQSESNQILNSKTLSYIGDISYVTYLVHWPVISIFLTSSVNSYVFC 252
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 25.8 bits (54), Expect = 7.0
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +1
Query: 79 PPVCSPPDCRPICGPASPLLCQSSVPPTQRCYPVNP 186
PP SPP RP P SP PP+ P NP
Sbjct: 150 PPPRSPPPRRPPMTPPSPQRRPPRTPPSPE--PRNP 183
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1
Query: 73 YXPPVCSPPDCRPICGPASPLLCQSSVP 156
Y P +P C+P C PA C + P
Sbjct: 119 YTPVAPAPVQCQPSCMPACEQSCVAPAP 146
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1
Query: 73 YXPPVCSPPDCRPICGPASPLLCQSSVP 156
Y P +P C+P C PA C + P
Sbjct: 119 YTPVAPAPVQCQPSCMPACEQSCVAPAP 146
>AF039046-14|AAB94214.1| 388|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 54
protein.
Length = 388
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/39 (28%), Positives = 15/39 (38%), Gaps = 4/39 (10%)
Frame = +1
Query: 73 YXPPVCSPP----DCRPICGPASPLLCQSSVPPTQRCYP 177
Y PP + P C+P+C C P +C P
Sbjct: 118 YNPPATTTPAPVVQCQPMCQQQCQSTCVQQQQPASQCQP 156
>AC006676-3|AAK71381.3| 157|Caenorhabditis elegans Hypothetical
protein M04F3.2 protein.
Length = 157
Score = 25.8 bits (54), Expect = 7.0
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -2
Query: 185 GFTG*HRCVGGTLLWQRSGDAGPQIGRQSGGEQTGGQ 75
GF G GG ++RS D G GR GG GGQ
Sbjct: 121 GFRGRREARGG---FRRSDDRGGFRGRDGGGGFRGGQ 154
>U70845-1|AAB09098.1| 79|Caenorhabditis elegans Hypothetical
protein F22H10.3 protein.
Length = 79
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 67 MGYXPPVCSPPDCRPICGPASPLL 138
MGY PP+ P P+ P +P++
Sbjct: 23 MGYAPPIAPIPMVAPMPVPVAPMM 46
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +1
Query: 97 PDCRPICGPASPLLCQSSVPPTQRCYPVN 183
P CRP C P+ + C P RC N
Sbjct: 309 PSCRPDCMPSCHVDCLIIPPQQVRCNSFN 337
>U23519-9|ABS19470.1| 203|Caenorhabditis elegans Hypothetical
protein F26G1.11 protein.
Length = 203
Score = 25.4 bits (53), Expect = 9.2
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 286 LQNKCVFLTIFKFTIEIVHCV 224
+QNKC F IF + + +C+
Sbjct: 182 IQNKCYFTHIFLLLVSLFNCI 202
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 82 PVCSPPDCRPICGPASPLLCQSSVPPTQRCYPVNPCIN 195
PVC+ P C P P P +P Y PC N
Sbjct: 34 PVCATPPCPPQYAPLPP----PPMPAPAPAYNPYPCAN 67
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 79 PPVCSPPDCRPICGPASP 132
PP C+PP P CG +P
Sbjct: 37 PPACAPPPA-PACGGGAP 53
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,162,933
Number of Sequences: 27780
Number of extensions: 149045
Number of successful extensions: 624
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 376873630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -