Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15a12
         (677 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065694-1|BAC05917.1|  310|Homo sapiens seven transmembrane hel...    31   2.8  
DQ925676-1|ABL59903.1|  121|Homo sapiens dymeclin protein.             30   8.7  

>AB065694-1|BAC05917.1|  310|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 310

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = -3

Query: 165 APCISACFEFWQFILIQFLFYFM*C---YLS*FHCRIYILHLAWMVCTREATT 16
           APCI   F +  F + + L   M C   Y++  H   Y L + W VCT  A+T
Sbjct: 94  APCILQTFLYLAFAITECLILVMMCYDRYVAICHPLQYTLIMNWRVCTVLAST 146


>DQ925676-1|ABL59903.1|  121|Homo sapiens dymeclin protein.
          Length = 121

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 19/55 (34%), Positives = 23/55 (41%)
 Frame = +3

Query: 138 TRNMPKYKEHDICTGRRANKSYSIKELLQYAVAYTAYCVCRSLPVIFYLLLGVYY 302
           TR   KY  H  C    AN S   + L QYA        CR L    Y+L  +Y+
Sbjct: 6   TRTRDKYL-HTNCLAALANMSAQFRSLHQYAAQRIISYTCRHLRRYVYVLDKLYF 59


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,086,680
Number of Sequences: 237096
Number of extensions: 1632971
Number of successful extensions: 2361
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2361
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)