Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15a09
         (700 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024847-1|AAK29961.1|  193|Caenorhabditis elegans Hypothetical ...    46   2e-05
Z78061-1|CAB01494.1|  658|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AF022975-3|AAB70674.1|  548|Caenorhabditis elegans Hypothetical ...    29   2.4  
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p...    28   7.4  
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.      28   7.4  
Z68337-8|CAA92749.2|  241|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>AC024847-1|AAK29961.1|  193|Caenorhabditis elegans Hypothetical
           protein Y65B4BR.8 protein.
          Length = 193

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 24/63 (38%), Positives = 36/63 (57%)
 Frame = +2

Query: 215 GCSVEIPLWLAESLYSRRPPLVSVELPKIYKESYREILNADACAVDLHKLGQHFYELGCY 394
           G  V+ P WL ES+ S      S++LPK Y  + + +LNAD+  ++L  L QHFY  G  
Sbjct: 55  GYGVDAPYWLLESVRSS----FSIQLPKAYSVNMQNVLNADSKKLNLSGLQQHFYGNGMQ 110

Query: 395 VAK 403
           + +
Sbjct: 111 LCR 113


>Z78061-1|CAB01494.1|  658|Caenorhabditis elegans Hypothetical
           protein C48G7.1 protein.
          Length = 658

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 20/58 (34%), Positives = 27/58 (46%)
 Frame = +2

Query: 386 GCYVAKHDIKSEVAATLNNTYRQRFRMLLAASMSSDSINTMQPLSASERIQAADASNT 559
           G Y A HD KS      NN  R+   MLL+  M+ +S    Q  S   R  +  +SN+
Sbjct: 112 GGYYAVHDTKSSSNTLNNNIPRRSSAMLLSPEMAMNS--EQQKNSKKRRSSSRSSSNS 167


>AF022975-3|AAB70674.1|  548|Caenorhabditis elegans Hypothetical
           protein K09C6.8 protein.
          Length = 548

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 17/74 (22%), Positives = 31/74 (41%)
 Frame = +2

Query: 341 CAVDLHKLGQHFYELGCYVAKHDIKSEVAATLNNTYRQRFRMLLAASMSSDSINTMQPLS 520
           C  DLHK+G    ++          ++    LNN +    R  ++ ++ +   N +QPL 
Sbjct: 327 CISDLHKIGYTHLDIRPSSFSLLRNNKAVVVLNNFFNSETRQNISRNIRTTKHNGLQPLY 386

Query: 521 ASERIQAADASNTE 562
             +   A + S  E
Sbjct: 387 VQQSRHARNKSERE 400


>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
            protein C47D12.1c protein.
          Length = 4053

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 639  ESVLKWKCYRHLNTNKIISD 698
            E V+KW+ +R L T+ IISD
Sbjct: 2126 EMVIKWELFRTLKTDHIISD 2145


>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
            C47D12.1b protein.
          Length = 4061

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 639  ESVLKWKCYRHLNTNKIISD 698
            E V+KW+ +R L T+ IISD
Sbjct: 2132 EMVIKWELFRTLKTDHIISD 2151


>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
            C47D12.1a protein.
          Length = 4064

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 639  ESVLKWKCYRHLNTNKIISD 698
            E V+KW+ +R L T+ IISD
Sbjct: 2132 EMVIKWELFRTLKTDHIISD 2151


>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
          Length = 4064

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 639  ESVLKWKCYRHLNTNKIISD 698
            E V+KW+ +R L T+ IISD
Sbjct: 2132 EMVIKWELFRTLKTDHIISD 2151


>Z68337-8|CAA92749.2|  241|Caenorhabditis elegans Hypothetical
           protein M7.12 protein.
          Length = 241

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 401 KHDIKSEVAATLNNTYRQRFRMLLAASMSSDSINT 505
           KHD ++EV   LNN +R    +  AA M+   I +
Sbjct: 30  KHDNRNEVVDFLNNNFRVEEPLSKAAGMTESDIQS 64


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,995,163
Number of Sequences: 27780
Number of extensions: 295255
Number of successful extensions: 645
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)