Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15a08
         (656 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81479-9|CAE17735.1|  215|Caenorhabditis elegans Hypothetical pr...    29   3.8  
CU457743-2|CAM36365.1|  695|Caenorhabditis elegans Hypothetical ...    28   5.1  

>Z81479-9|CAE17735.1|  215|Caenorhabditis elegans Hypothetical
           protein C34F6.11 protein.
          Length = 215

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 379 ISRIIQHYNFEVILFIIWVFKCYFIFIQIMF 287
           + RI+Q  N   +   IW F CY ++I  +F
Sbjct: 40  VDRIVQERNLLSVPEGIWTFFCYSVYINFIF 70


>CU457743-2|CAM36365.1|  695|Caenorhabditis elegans Hypothetical
           protein K09E10.2 protein.
          Length = 695

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
 Frame = +2

Query: 101 KCNIYYITINNVKLCSIL*WQSNLDNCLKKI----KMLRNLKPEVVWIEGRCYRANDSPA 268
           K   Y IT+++ + C  L    N  +CLKK+    + + N KP+  ++  R +   D   
Sbjct: 493 KNRAYNITVDSERGCEPLAASPNDKHCLKKLSEFAEFIENAKPDYAFMFTRFFAVADKFK 552

Query: 269 EFNS 280
           + NS
Sbjct: 553 DSNS 556


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,177,714
Number of Sequences: 27780
Number of extensions: 219868
Number of successful extensions: 533
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)