Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15a07
         (723 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    27   0.14 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   0.96 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   3.9  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    23   3.9  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   6.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.7  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   6.7  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   6.7  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    21   8.9  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -2

Query: 296 PFVKHTGYLCDSRSIHHY--IHCAIFFFPDCYRSMCIQ 189
           PF +H GYL  S +I  Y  +   +F +   YR+  IQ
Sbjct: 199 PFTEHLGYLIFSSTISFYLPLFVMVFTYYKIYRAAVIQ 236


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +3

Query: 366 SKNNRKPNYCEMDWHNYHRLHVIYAFMENLSHEYPYL 476
           SK    P+Y   ++   H+L +   ++E LS++ PYL
Sbjct: 246 SKEYDLPDYRGEEYLYSHKLLLNRYYLERLSNDLPYL 282


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +3

Query: 366 SKNNRKPNYCEMDWHNYHRLHVIYAFMENLSHEYPYL 476
           SK    P+Y   ++   H+L +   ++E LS++ P+L
Sbjct: 246 SKEYDLPDYRGEEYLYSHKLLLNRYYLERLSNDLPHL 282


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 336 VLSREQGIKYSKNNRKPNYCEMDWHNYHR 422
           + S     KYS  N   NY   +++NY++
Sbjct: 315 ISSLSNNYKYSNYNNYNNYNNNNYNNYNK 343


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 224 FFPDCYRSMCIQ*FNK 177
           + PD YRS+  Q FN+
Sbjct: 36  YLPDRYRSVATQVFNR 51


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 353 LFPTQYRPNIANCYRIRYLPFVKH 282
           L P +    I N Y +++ PF KH
Sbjct: 869 LVPLEGNLMINNKYALKFFPFDKH 892


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 569 PDANVIFITIRYL*NLNISSFSR 501
           PD N +  T  Y+ +L++  FSR
Sbjct: 328 PDLNALIATGLYINDLSMHDFSR 350


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 346 LLSTDPTSPIAIEYGI 299
           +L  D +SP A+EYGI
Sbjct: 352 MLVQDISSPDAVEYGI 367


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +3

Query: 363 YSKNNRKPNYCEMDWHNYHRLHVIYAFMENL 455
           Y+ NN   NY   + +NY+    +Y  + N+
Sbjct: 329 YNNNNYNNNYNNYNNNNYNNYKKLYYNIINI 359


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,785
Number of Sequences: 438
Number of extensions: 5021
Number of successful extensions: 20
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)