Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14p19
         (668 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   0.65 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   6.1  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   6.1  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   8.0  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
 Frame = -3

Query: 195  SNKPKIPSPP-----HNSSSFRYLKFFCNFSQAICKREVMSNTLY 76
            S  P+ P PP      N+SSF   K     S+A C R+ + N  Y
Sbjct: 1854 SGSPEPPPPPPRNHDQNNSSFNDSKESNEISEAECDRDQLVNRNY 1898


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 640 CSVRVLQSPIELSEF 596
           C  R+L  PIELS +
Sbjct: 397 CIARILDEPIELSGY 411


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = -3

Query: 195 SNKPKIPSPPHNSSSFRYLKFFCNFSQAICKREVMSNTLYHTTL*FQYKCFV 40
           S K K+   P+N    ++L +     + +    V SNT++   L F  + +V
Sbjct: 301 SFKRKVNFYPNNQDIEKFLNYLKRGGKTLTSISVESNTMFINILKFLKQKYV 352


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 265 VREDTFIK*VWASLGWIFFTYIVT*MMLSML 357
           V+ED  +K V  + GW     IV   ++S++
Sbjct: 384 VQEDDDVKLVLLNFGWQMICLIVVIALVSII 414


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,874
Number of Sequences: 438
Number of extensions: 4561
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)