Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14p15
(721 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 39 4e-05
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 36 4e-04
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 36 4e-04
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 27 0.13
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 23 3.8
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 5.1
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 6.7
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 6.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 8.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 8.9
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 21 8.9
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 39.1 bits (87), Expect = 4e-05
Identities = 15/62 (24%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 202 ISVIFIGMPLVYSEICIGQYMNGNVISMWNFFPIFRIAGYVVGI-STQLMVYYRKKMIWK 378
++++ G+P+ + E+ +GQ + + ++ P+F+ GY + S + VYY + W
Sbjct: 25 LTLVLAGIPMFFMELALGQMLTVGGLGVFKIAPLFKGIGYAAAVMSCWMNVYYIVILAWA 84
Query: 379 LF 384
+F
Sbjct: 85 IF 86
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 35.9 bits (79), Expect = 4e-04
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 190 VLHAISVIFIGMPLVYSEICIGQYMNGNVISMWNFFPIFRIAGYVVGI-STQLMVYYRKK 366
V + I++ G+P+ E+ +GQ M + ++ PIF+ GY + S +YY
Sbjct: 59 VPYFIALALAGVPMFLMELSLGQMMTIGGLGVFKIAPIFKGIGYATCVLSCWTNIYYIII 118
Query: 367 MIWKLF 384
+ W LF
Sbjct: 119 LAWALF 124
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 35.9 bits (79), Expect = 4e-04
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 190 VLHAISVIFIGMPLVYSEICIGQYMNGNVISMWNFFPIFRIAGYVVGI-STQLMVYYRKK 366
V + I++ G+P+ E+ +GQ M + ++ PIF+ GY + S +YY
Sbjct: 112 VPYFIALALAGVPMFLMELSLGQMMTIGGLGVFKIAPIFKGIGYATCVLSCWTNIYYIII 171
Query: 367 MIWKLF 384
+ W LF
Sbjct: 172 LAWALF 177
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 27.5 bits (58), Expect = 0.13
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 716 IRSVQEEDRGQYMCQINTDPMKSQ 645
I SV++ED+G Y C + D +Q
Sbjct: 357 IESVKKEDKGMYQCFVRNDQESAQ 380
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 436 KMFVPEIMTREFLYRQVRLRGYYRSKKISHIKNQE 540
++FV I T + + + YY S+ +SH+ N E
Sbjct: 209 RIFVATIFTFSYCIPMILII-YYYSQIVSHVVNHE 242
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 22.2 bits (45), Expect = 5.1
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 716 IRSVQEEDRGQYMCQINT 663
I++V D G YMCQ ++
Sbjct: 461 IKNVDYADTGAYMCQASS 478
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 6.7
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +1
Query: 37 NEFAGNYCPKIQSRWNSYGNYKLI 108
+EF + C Q R+ GNY +
Sbjct: 267 DEFGDSKCSLCQRRFEEQGNYSCL 290
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.8 bits (44), Expect = 6.7
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 683 IGLYLLLERYGCV 721
+GL+LLL+ + CV
Sbjct: 603 LGLFLLLDMFNCV 615
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 8.9
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = -3
Query: 716 IRSVQEEDRGQYMC 675
+ + EDRG Y C
Sbjct: 386 LNGINREDRGMYQC 399
Score = 21.4 bits (43), Expect = 8.9
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = -3
Query: 716 IRSVQEEDRGQYMCQI 669
+ ++Q +D G Y CQ+
Sbjct: 1371 LSNLQSQDGGDYTCQV 1386
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 8.9
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = -3
Query: 716 IRSVQEEDRGQYMC 675
+ + EDRG Y C
Sbjct: 386 LNGINREDRGMYQC 399
Score = 21.4 bits (43), Expect = 8.9
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = -3
Query: 716 IRSVQEEDRGQYMCQI 669
+ ++Q +D G Y CQ+
Sbjct: 1367 LSNLQSQDGGDYTCQV 1382
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.4 bits (43), Expect = 8.9
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 222 NAISVFRNMYWTVHE 266
N +SVF WT HE
Sbjct: 170 NWLSVFNGTGWTFHE 184
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,154
Number of Sequences: 438
Number of extensions: 5277
Number of successful extensions: 22
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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