Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14p08
         (540 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC021106-1|AAH21106.1|  137|Homo sapiens mitochondrial ribosomal...   121   1e-27
AF151890-1|AAD34127.1|  137|Homo sapiens CGI-132 protein protein.     121   1e-27
AB049948-1|BAB41001.1|  137|Homo sapiens mitochondrial ribosomal...   121   1e-27

>BC021106-1|AAH21106.1|  137|Homo sapiens mitochondrial ribosomal
           protein S16 protein.
          Length = 137

 Score =  121 bits (292), Expect = 1e-27
 Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 2/118 (1%)
 Frame = +3

Query: 126 SIRLIRQGCTNRPFFHISVTHRRRLNSQPVIEQLGSYDPMPNINNEKLVALNLERLKYWL 305
           +IRL   GCTNRPF+ I   H +       +EQLGSYDP+PN + EKLVALNL+R+++W+
Sbjct: 18  TIRLALGGCTNRPFYRIVAAHNKCPRDGRFVEQLGSYDPLPNSHGEKLVALNLDRIRHWI 77

Query: 306 GKGAHVSTPVSELLGLSGFFPIHPRTYMTAWR-NRQQERE-NLAKQEAENAKEQTAAT 473
           G GAH+S P+ +LLGL+GFFP+HP     A R  R++ RE  LA Q+ +     T AT
Sbjct: 78  GCGAHLSKPMEKLLGLAGFFPLHPMMITNAERLRRKRAREVLLASQKTDAEATDTEAT 135


>AF151890-1|AAD34127.1|  137|Homo sapiens CGI-132 protein protein.
          Length = 137

 Score =  121 bits (292), Expect = 1e-27
 Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 2/118 (1%)
 Frame = +3

Query: 126 SIRLIRQGCTNRPFFHISVTHRRRLNSQPVIEQLGSYDPMPNINNEKLVALNLERLKYWL 305
           +IRL   GCTNRPF+ I   H +       +EQLGSYDP+PN + EKLVALNL+R+++W+
Sbjct: 18  TIRLALGGCTNRPFYRIVAAHNKCPRDGRFVEQLGSYDPLPNSHGEKLVALNLDRIRHWI 77

Query: 306 GKGAHVSTPVSELLGLSGFFPIHPRTYMTAWR-NRQQERE-NLAKQEAENAKEQTAAT 473
           G GAH+S P+ +LLGL+GFFP+HP     A R  R++ RE  LA Q+ +     T AT
Sbjct: 78  GCGAHLSKPMEKLLGLAGFFPLHPMMITNAERLRRKRAREVLLASQKTDAEATDTEAT 135


>AB049948-1|BAB41001.1|  137|Homo sapiens mitochondrial ribosomal
           protein S16 protein.
          Length = 137

 Score =  121 bits (292), Expect = 1e-27
 Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 2/118 (1%)
 Frame = +3

Query: 126 SIRLIRQGCTNRPFFHISVTHRRRLNSQPVIEQLGSYDPMPNINNEKLVALNLERLKYWL 305
           +IRL   GCTNRPF+ I   H +       +EQLGSYDP+PN + EKLVALNL+R+++W+
Sbjct: 18  TIRLALGGCTNRPFYRIVAAHNKCPRDGRFVEQLGSYDPLPNSHGEKLVALNLDRIRHWI 77

Query: 306 GKGAHVSTPVSELLGLSGFFPIHPRTYMTAWR-NRQQERE-NLAKQEAENAKEQTAAT 473
           G GAH+S P+ +LLGL+GFFP+HP     A R  R++ RE  LA Q+ +     T AT
Sbjct: 78  GCGAHLSKPMEKLLGLAGFFPLHPMMITNAERLRRKRAREVLLASQKTDAEATDTEAT 135


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,655,951
Number of Sequences: 237096
Number of extensions: 1438155
Number of successful extensions: 2837
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2837
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)