Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14p05
         (678 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0553 + 23185473-23186188,23187096-23187101,23187230-231873...    29   2.6  
11_02_0123 - 8550193-8550213,8550434-8550682,8550787-8550834,855...    29   3.4  
04_04_1411 + 33375988-33376045,33376161-33376551,33376830-333769...    28   6.0  
02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,608...    28   6.0  
01_03_0304 - 14838977-14838988,14839291-14840302,14840414-148406...    28   7.9  

>01_05_0553 +
           23185473-23186188,23187096-23187101,23187230-23187374,
           23187887-23188159,23188275-23188338,23188479-23188744,
           23188951-23189045,23189544-23189718,23190669-23191063,
           23191830-23191953,23192864-23192959,23193049-23193120,
           23194687-23194824,23195369-23195549,23195602-23195963,
           23196944-23197386,23197461-23197763,23197857-23198081,
           23198260-23198350,23198702-23198779,23198939-23199229,
           23199316-23199513,23199681-23200163,23200488-23200562,
           23201163-23201324,23201400-23201729,23201816-23201916,
           23202477-23202581,23202931-23203162,23203913-23204257,
           23204346-23204447,23206010-23206153,23206463-23206551,
           23206979-23207061,23207172-23207287,23207824-23207909,
           23208461-23208560,23209270-23209335
          Length = 2451

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 21/63 (33%), Positives = 29/63 (46%)
 Frame = +3

Query: 150 KAYSVELEKSLRNVDWMLNLQQYVELESKARADFANPNKKWREGTAKTSFTYLLLDPRLT 329
           K Y V +  SL ++D  + L +    E     +  + N +  E    TSF  LLLD  L 
Sbjct: 580 KIYMVSIVLSLLHMDDSIKLSEVAPSECSVSHECFDSNVESEEKNMVTSFVGLLLD-ILR 638

Query: 330 HNL 338
           HNL
Sbjct: 639 HNL 641


>11_02_0123 -
           8550193-8550213,8550434-8550682,8550787-8550834,
           8550939-8551025,8551104-8551184,8551264-8551368,
           8551464-8551556,8551635-8551715,8551794-8551895,
           8552144-8552224,8552304-8552405,8552499-8552834,
           8552920-8553006,8553275-8553493,8553575-8553769
          Length = 628

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 21/86 (24%), Positives = 38/86 (44%)
 Frame = +3

Query: 261 NKKWREGTAKTSFTYLLLDPRLTHNLPERASKQNQHVSWVTFVNSIFYVGKGKRSRPYSH 440
           +K WR    +    Y  LD R  + + E   K    + WV  +  I+   K K ++    
Sbjct: 87  SKGWRSYKHRLRDRYYNLDVRTLNEISEDVPKGVNAIQWVGLL-EIWGQDKHKEAKKRGK 145

Query: 441 LYQALTLWKRDFKTSKDKKVQQILDI 518
           +++ + LW    K  KD  ++ +LD+
Sbjct: 146 VHE-IDLWDEAHK-KKDAHMKAVLDM 169


>04_04_1411 +
           33375988-33376045,33376161-33376551,33376830-33376912,
           33377209-33377297,33377481-33377554,33377768-33377818,
           33377861-33377900,33378567-33378593,33379191-33379874
          Length = 498

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 4/116 (3%)
 Frame = +3

Query: 318 PRLTHNLP----ERASKQNQHVSWVTFVNSIFYVGKGKRSRPYSHLYQALTLWKRDFKTS 485
           P  T N P    E+  ++ +H++   FV S+     G  SR  S +Y+ +T         
Sbjct: 200 PSTTTNFPVAEYEKELEEMKHMTRQEFVASLRRKSSGF-SRGAS-IYRGVTSLASHVWPL 257

Query: 486 KDKKVQQILDIWSDKVGVVCLHIFQNVIPAEAYTYEAAMIDVLGINNIKNLKAGNY 653
             K   Q+ +I+ D+  +V   +        A  Y+ A I   G+N + N + G Y
Sbjct: 258 ARKS--QVKNIYFDQDLIVACFLLSGTEEEAAEAYDIAAIKFRGLNAVTNFEIGRY 311


>02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,
            6087354-6088391,6089733-6089925,6090326-6090375,
            6090470-6090744,6091114-6091180,6091189-6091278,
            6091301-6091381,6091435-6091593
          Length = 1414

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = -3

Query: 352  LALSGRLCVSRGSKRRYVKEVFAVPSRHFLLGLAKSARALLSNSTYCWRFS 200
            L L  +   ++ S +++++    VP RHF L L     AL S+  + + F+
Sbjct: 1352 LKLMNKEYAAKESLKKFLRFFVGVPKRHFCLSLESKPAALSSHPLWQYPFT 1402


>01_03_0304 -
           14838977-14838988,14839291-14840302,14840414-14840609,
           14840795-14841149
          Length = 524

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -3

Query: 271 HFLLGLAKSARALLSNSTYCWRFSIQSTLRRDF 173
           + +LG++   R+L +  T  W+  IQ  +RRD+
Sbjct: 165 NIVLGISHFNRSLFNKITVKWKRGIQKKIRRDY 197


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,113,580
Number of Sequences: 37544
Number of extensions: 403718
Number of successful extensions: 1023
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)