Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14p05
(678 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 82 3e-16
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 82 3e-16
Z83108-2|CAB05510.1| 820|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AF077534-9|AAC26286.1| 194|Caenorhabditis elegans Hypothetical ... 49 4e-06
Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical pr... 33 0.14
U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein. 33 0.14
Z70037-2|CAA93879.2| 906|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF173170-1|AAF13163.1| 868|Caenorhabditis elegans CLC chloride ... 29 3.0
AF040643-1|AAB94960.1| 998|Caenorhabditis elegans Hypothetical ... 29 3.0
Z81481-5|CAB63436.1| 405|Caenorhabditis elegans Hypothetical pr... 29 4.0
AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm rec... 28 5.3
Z70782-11|CAA94848.1| 487|Caenorhabditis elegans Hypothetical p... 28 7.0
Z70781-9|CAA94837.1| 487|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z68004-4|CAA91984.1| 91|Caenorhabditis elegans Hypothetical pr... 28 7.0
AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,... 28 7.0
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 27 9.3
U39744-4|AAK18885.4| 389|Caenorhabditis elegans Hypothetical pr... 27 9.3
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 27 9.3
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical protein
F42H11.2 protein.
Length = 732
Score = 82.2 bits (194), Expect = 3e-16
Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 3/183 (1%)
Frame = +3
Query: 135 NQIAYKAYSVELEKSLRNVDWMLNLQQYV-ELESKARADFANPNKKWREGTAKTSFTYLL 311
NQI K S +LE LRN + + + R++F+ G +F YL+
Sbjct: 507 NQILVKRNSPQLELVLRNGFLPADFASRARKCDENVRSEFSG------NGFGYNAFCYLI 560
Query: 312 LDPRLTHNLPERASKQNQHVSWVTFVNSIFYVGKGKRSRPYSHLYQALTLWKRDF--KTS 485
+DPR+ + E + + TFV SIFYVGKG ++RP +H A +RD K
Sbjct: 561 MDPRILGSNVENLTLE-------TFVRSIFYVGKGSKNRPLAHFIDARNE-RRDKLDKLK 612
Query: 486 KDKKVQQILDIWSDKVGVVCLHIFQNVIPAEAYTYEAAMIDVLGINNIKNLKAGNYYGVA 665
+K++ I ++W+ G+ I V EA+ EA++I+ + + N++N KAG ++G
Sbjct: 613 TCEKLKTIDELWTLGFGIPRHEISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTT 672
Query: 666 ASW 674
SW
Sbjct: 673 KSW 675
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 82.2 bits (194), Expect = 3e-16
Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 3/183 (1%)
Frame = +3
Query: 135 NQIAYKAYSVELEKSLRNVDWMLNLQQYV-ELESKARADFANPNKKWREGTAKTSFTYLL 311
NQI K S +LE LRN + + + R++F+ G +F YL+
Sbjct: 507 NQILVKRNSPQLELVLRNGFLPADFASRARKCDENVRSEFSG------NGFGYNAFCYLI 560
Query: 312 LDPRLTHNLPERASKQNQHVSWVTFVNSIFYVGKGKRSRPYSHLYQALTLWKRDF--KTS 485
+DPR+ + E + + TFV SIFYVGKG ++RP +H A +RD K
Sbjct: 561 MDPRILGSNVENLTLE-------TFVRSIFYVGKGSKNRPLAHFIDARNE-RRDKLDKLK 612
Query: 486 KDKKVQQILDIWSDKVGVVCLHIFQNVIPAEAYTYEAAMIDVLGINNIKNLKAGNYYGVA 665
+K++ I ++W+ G+ I V EA+ EA++I+ + + N++N KAG ++G
Sbjct: 613 TCEKLKTIDELWTLGFGIPRHEISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTT 672
Query: 666 ASW 674
SW
Sbjct: 673 KSW 675
>Z83108-2|CAB05510.1| 820|Caenorhabditis elegans Hypothetical
protein F44E5.2 protein.
Length = 820
Score = 57.2 bits (132), Expect = 1e-08
Identities = 34/104 (32%), Positives = 52/104 (50%)
Frame = +3
Query: 363 QHVSWVTFVNSIFYVGKGKRSRPYSHLYQALTLWKRDFKTSKDKKVQQILDIWSDKVGVV 542
+ V + FV+ IFYVGKG R H +AL +++ D K I+ IW+ +
Sbjct: 673 EDVKFDNFVSYIFYVGKGTGFRSLHHFIEAL---QKENDPYIDSKCGSIVSIWNSGQEIG 729
Query: 543 CLHIFQNVIPAEAYTYEAAMIDVLGINNIKNLKAGNYYGVAASW 674
C+ IF V A EAAMI L +++ N G++ G++ W
Sbjct: 730 CVKIFVGVSSTVAQIKEAAMIKALSKHDLTNKIEGSFLGLSNIW 773
>AF077534-9|AAC26286.1| 194|Caenorhabditis elegans Hypothetical
protein K07D4.2 protein.
Length = 194
Score = 48.8 bits (111), Expect = 4e-06
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
Frame = +3
Query: 222 ELESKARADFANPNKKWREGTAKTSFTYLLLDPRLTHNLPERASKQNQHVSWVTFVNSIF 401
+L+ K + N KK + S+ Y+L++P + K + V TF++SIF
Sbjct: 9 DLKEKGKT-MDNDLKKSLKEAPSESYCYVLINPYVL-------DKDVREVDLATFLSSIF 60
Query: 402 YVGKGKRSRPYSHLYQALTLWKRDFKTSKDKKVQQILDIWSDKVGVVCLH-IFQNVIPAE 578
YVGKGK R ++ A +K+ I W+ K G V H I++ +I
Sbjct: 61 YVGKGKGERAMAYFKDACG------NIQGSRKLTTIDQAWNKK-GFVYKHIIWRPIIENL 113
Query: 579 AYTYEAAMI----DVLGINNIKNLKAGNYYGVAASW 674
A EAAMI ++ G +N N G++ G +A W
Sbjct: 114 ALAREAAMIFFFKNLAGKSNFTNKYNGSFKGESAFW 149
>Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical
protein R12H7.1 protein.
Length = 386
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +3
Query: 198 MLNLQQYV--ELESKARADFANPNKKWREGTAKTSFTYLL-LDPRLTHNLPERASKQNQH 368
+++ +QYV ++ A F P +++ E TY L L + HN ER ++Q +
Sbjct: 42 LVSAKQYVGFPIQCWVPATFTEPMEQYTENYCWVQNTYFLPLHDYIPHNYAERENRQIGY 101
Query: 369 VSWVTFV 389
WV FV
Sbjct: 102 YQWVPFV 108
>U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein.
Length = 386
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +3
Query: 198 MLNLQQYV--ELESKARADFANPNKKWREGTAKTSFTYLL-LDPRLTHNLPERASKQNQH 368
+++ +QYV ++ A F P +++ E TY L L + HN ER ++Q +
Sbjct: 42 LVSAKQYVGFPIQCWVPATFTEPMEQYTENYCWVQNTYFLPLHDYIPHNYAERENRQIGY 101
Query: 369 VSWVTFV 389
WV FV
Sbjct: 102 YQWVPFV 108
>Z70037-2|CAA93879.2| 906|Caenorhabditis elegans Hypothetical
protein T27D12.2a protein.
Length = 906
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 271 GGKARRRLPSRIFSWIRDSRTISRRE--PANKTNMSLGSLL*TPYFTSG 411
G + R R S IFS I + R SRR AN +MS G+ L T SG
Sbjct: 689 GHRRRSRTASEIFSTINNLRKYSRRGSLAANGAHMSSGNALMTDRNISG 737
>AF173170-1|AAF13163.1| 868|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 868
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 271 GGKARRRLPSRIFSWIRDSRTISRRE--PANKTNMSLGSLL*TPYFTSG 411
G + R R S IFS I + R SRR AN +MS G+ L T SG
Sbjct: 651 GHRRRSRTASEIFSTINNLRRYSRRGSLAANGAHMSSGNALMTDRNISG 699
>AF040643-1|AAB94960.1| 998|Caenorhabditis elegans Hypothetical
protein F14D2.6 protein.
Length = 998
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/77 (23%), Positives = 32/77 (41%)
Frame = +3
Query: 129 RNNQIAYKAYSVELEKSLRNVDWMLNLQQYVELESKARADFANPNKKWREGTAKTSFTYL 308
+N ++ Y V+ L N+D++ NL+Q V LE+ + K +
Sbjct: 835 KNTKVIYGLLVVKSTAKLENLDFLENLEQIVSLENSTSPIIQLSSNKLLQNVNFPKIKTP 894
Query: 309 LLDPRLTHNLPERASKQ 359
L P+ H + +KQ
Sbjct: 895 LFSPKNNHYIEIVDNKQ 911
>Z81481-5|CAB63436.1| 405|Caenorhabditis elegans Hypothetical
protein C38D9.7 protein.
Length = 405
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +3
Query: 165 ELEKSLRNVDWMLNLQQYVE-LESKARADFANPNKKWREGTAKTSFTYLLLDPRLTHNLP 341
E+ + +DW +Y + K + P K W E AK L+ +++ N
Sbjct: 86 EVPHKISEIDWCKKFVEYFNGVPQKPSLIYNMPEKVWNEICAKMELYDRLVARKVSRNFR 145
Query: 342 ERASKQNQH 368
++ +Q H
Sbjct: 146 DKIDQQELH 154
>AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm
receptor protein 82 protein.
Length = 362
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 291 TSFTYLLLDPRLTHNLPERASKQNQHVSWVTFVNSIFY 404
T F Y L H L ER K +HV W++ + SIF+
Sbjct: 107 TQFIYRYLSVASFHFLRERYFKGKRHVVWIS-LTSIFF 143
>Z70782-11|CAA94848.1| 487|Caenorhabditis elegans Hypothetical
protein F57A8.7 protein.
Length = 487
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 223 STYCWRFSIQSTLRRDFSNSTL 158
+TY W+F S L +FSN TL
Sbjct: 327 TTYSWQFYSDSVLDEEFSNETL 348
>Z70781-9|CAA94837.1| 487|Caenorhabditis elegans Hypothetical
protein F57A8.7 protein.
Length = 487
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 223 STYCWRFSIQSTLRRDFSNSTL 158
+TY W+F S L +FSN TL
Sbjct: 327 TTYSWQFYSDSVLDEEFSNETL 348
>Z68004-4|CAA91984.1| 91|Caenorhabditis elegans Hypothetical
protein F47B10.4 protein.
Length = 91
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +3
Query: 15 VYMSCIYI*KFTMIFTKCKYLMKIPKVYQSCNLSNVPF----RNNQIA 146
VY + + T F +CK ++ V +C +SN+P+ R NQ A
Sbjct: 29 VYPGIVIAVEQTSFFARCKKVIVNTVVSMTCGVSNIPYSFFARTNQTA 76
>AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,
light intermediateprotein 1 protein.
Length = 643
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/53 (24%), Positives = 27/53 (50%)
Frame = +3
Query: 516 IWSDKVGVVCLHIFQNVIPAEAYTYEAAMIDVLGINNIKNLKAGNYYGVAASW 674
+W +++ L I ++ + +A+TY + + V+G N N + + G SW
Sbjct: 362 VWDNRLTSRKLPINRSPLTTQAHTYTVSCLAVVGTKNAHNFVSLSRDGRICSW 414
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 261 NKKWREGTAKTSFTYLLLDPRLTHNLPERASKQNQHVSWVTFVNSIFY-VGKGKRSR 428
NKK R+ +K S+ + RL L + + QH + T + + VG G R R
Sbjct: 434 NKKKRDDPSKLSWKVTAVHKRLETRLMQILQFRKQHEQFRTVIERVLRPVGNGSRER 490
>U39744-4|AAK18885.4| 389|Caenorhabditis elegans Hypothetical
protein C03F11.4 protein.
Length = 389
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +3
Query: 270 WRE--GTAKTSFTYLLLDPRLTHNLPERASKQNQHVSWVTFV-NSIFYVGK 413
W E GT + + +YL + + H++PE +QHV+ FV N + Y K
Sbjct: 278 WLEVNGTYEENESYLSFEKNILHDIPE----TDQHVNAAEFVMNKLIYYAK 324
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 261 NKKWREGTAKTSFTYLLLDPRLTHNLPERASKQNQHVSWVTFVNSIFY-VGKGKRSR 428
NKK R+ +K S+ + RL L + + QH + T + + VG G R R
Sbjct: 434 NKKKRDDPSKLSWKVTAVHKRLETRLMQILQFRKQHEQFRTVIERVLRPVGNGSRER 490
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,234,483
Number of Sequences: 27780
Number of extensions: 346029
Number of successful extensions: 961
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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