Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14p03
         (636 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81128-4|CAB03403.1|  898|Caenorhabditis elegans Hypothetical pr...   194   3e-50
Z49129-2|CAA88961.1|  177|Caenorhabditis elegans Hypothetical pr...    32   0.40 
U70845-2|AAB09100.1|  102|Caenorhabditis elegans Hypothetical pr...    31   0.91 
U80445-1|AAB37794.1|  855|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AL021479-1|CAA16321.2|  346|Caenorhabditis elegans Hypothetical ...    29   3.7  
Z82288-7|CAB05326.1|  390|Caenorhabditis elegans Hypothetical pr...    28   4.9  
U67949-5|AAB07566.1|  705|Caenorhabditis elegans Hypothetical pr...    27   8.5  

>Z81128-4|CAB03403.1|  898|Caenorhabditis elegans Hypothetical protein
            T23D8.4 protein.
          Length = 898

 Score =  194 bits (474), Expect = 3e-50
 Identities = 99/216 (45%), Positives = 141/216 (65%), Gaps = 5/216 (2%)
 Frame = +3

Query: 3    YQVRGCLLTYLERLDDEFTKLLKECDPHSNEYVERLKDEVRVSALIDRVCQVVE-RDGT- 176
            Y+++G +L  ++RLD E  K+L+  D HSN+Y+E+LK E  + +LI++  + VE R+ + 
Sbjct: 413  YRIQGSILIAVQRLDGELAKILQNADCHSNDYIEKLKAEKDMCSLIEKAEKYVELRNDSG 472

Query: 177  ---PQEICRAYLRKIDHLYYKFDPRAVRKDLPPTEETTIKKMERYCKYIYAHDETDRLRT 347
                 E+C+ Y+ +I+H YYK+  +         EE   K M+  C  IY  D+  RLR 
Sbjct: 473  IFDKHEVCKVYMMRIEHAYYKYQDQ--------NEEDAGKLMDYLCNKIYTLDDEKRLRQ 524

Query: 348  RAILSHIYHHALHDNWFQARDLLLMSHLQETVQHSDPSTQILYNRTMANLGLCAFRRGNV 527
            RA+L H+Y+ A+HD W +ARDLLLMSH+Q  V HSD  TQILYNRT+  LGLCAFR G +
Sbjct: 525  RAMLCHVYYLAVHDKWHRARDLLLMSHMQAIVDHSDVDTQILYNRTICQLGLCAFRHGFI 584

Query: 528  KEAHGCLAELMMTGKPKELLAQGLLPQRQHERSKEQ 635
            +EAH  L+E+  T + KELLAQ  +  RQHE++ EQ
Sbjct: 585  REAHQGLSEIQNTQRAKELLAQA-VGTRQHEKTAEQ 619


>Z49129-2|CAA88961.1|  177|Caenorhabditis elegans Hypothetical
           protein T05B9.2 protein.
          Length = 177

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
 Frame = +3

Query: 75  CDPHSNEYVERLKDEVRVSALIDRVCQVVERDGTPQ-EICRAYLRKIDHLYYKFDPRA-- 245
           C    +E   RL+D V V  +      V+E D  P  E C+   RK+  LYY + P +  
Sbjct: 63  CQDDEDEVRYRLQDHVIVGPI------VMEADDVPDGEECKENCRKVGALYYSWRPNSDN 116

Query: 246 VRKDLPPTEE 275
            R ++ P EE
Sbjct: 117 QRSNVVPVEE 126


>U70845-2|AAB09100.1|  102|Caenorhabditis elegans Hypothetical
           protein F22H10.2 protein.
          Length = 102

 Score = 30.7 bits (66), Expect = 0.91
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -1

Query: 408 HGLGTSCHAGHGDRYEKV*HEFSDDRSHHGH 316
           HGLG +   GH   +    H F     HHGH
Sbjct: 71  HGLGHALTGGHHHHHHHGGHHFGHHHHHHGH 101


>U80445-1|AAB37794.1|  855|Caenorhabditis elegans Hypothetical
           protein C50F2.3 protein.
          Length = 855

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 10/121 (8%)
 Frame = +3

Query: 33  LERLDDEFTKLLKECDPHSNEYV----ERLKDEVRVS----ALIDRVCQVVERDGTPQEI 188
           LER  D F + L+ C P   +Y+     +L++E  ++    ++ +R C  V+R      +
Sbjct: 577 LERARDLFEQCLENCPPTHAKYIFLLYAKLEEEHGLARHALSIYNRACSGVDR-ADMHSM 635

Query: 189 CRAYLRKIDHLYYKFDPRAV-RKDLPPTEETTIKKME-RYCKYIYAHDETDRLRTRAILS 362
              Y++K+  +Y     R +  + +    E   + M  RY +      E D  R RAI +
Sbjct: 636 YNIYIKKVQEMYGIAQCRPIFERAISELPEDKSRAMSLRYAQLETTVGEID--RARAIYA 693

Query: 363 H 365
           H
Sbjct: 694 H 694


>AL021479-1|CAA16321.2|  346|Caenorhabditis elegans Hypothetical
           protein Y22F5A.2 protein.
          Length = 346

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 398 EPVVMQGMVIDMRKYSTSSQTIGLIMGINVFAVTFH 291
           EP  +Q  +I   KYS+ S  I  I GI ++ + FH
Sbjct: 157 EPSELQLKIIINEKYSSISTWISAIPGIAIYDIDFH 192


>Z82288-7|CAB05326.1|  390|Caenorhabditis elegans Hypothetical
           protein ZK896.9 protein.
          Length = 390

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
 Frame = +1

Query: 220 CTTNLIHVQFEK--IFRLLRK---QLLRKWNVTANTFMPMMRPIV*ELVLYFLISITMPC 384
           CT +L+    E+  I + LRK   +    W  T    +P     V   +LY  +   +P 
Sbjct: 53  CTVSLLLACIEEKSIAKGLRKIHHEFFVNWRDTLKVLVPSAIYTVQNFLLYVAVD-NLPA 111

Query: 385 MTTGSKPVICYSCLIFKRPYNTLILVHRFCIIGQWLI*VCVLFAEV 522
            T     ++ Y   I      T++++HR   I QW I + VLFA V
Sbjct: 112 ATY----MVTYQLKILTTAAFTVLVLHRRLTIQQW-ISLFVLFAGV 152


>U67949-5|AAB07566.1|  705|Caenorhabditis elegans Hypothetical
           protein F55A4.5 protein.
          Length = 705

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
 Frame = +3

Query: 30  YLERLDDEFTKLLKECDPHSNEYVERLKDEVRVSAL-IDRVCQVVERDGTPQEICRAYLR 206
           Y  +++  F  L +E  PH  +YV R       + +  + V +  ++    QE C   L 
Sbjct: 302 YQLKVNVVFEVLKEEGPPHDRQYVVRCAFVTSGNVVKAEAVGKGKKKKSAQQEACTQLLA 361

Query: 207 KIDHLYYKFDPRAVRKDLPPTEE 275
            ++HL  + +P A+  ++  T++
Sbjct: 362 TVEHLTPENNPVALATNVCKTQK 384


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,020,725
Number of Sequences: 27780
Number of extensions: 298877
Number of successful extensions: 864
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)