Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14o19
(139 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 32 0.38
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 32 0.38
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 32 0.38
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 32 0.38
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 32 0.38
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 32 0.38
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 32 0.38
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 31 0.50
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 31 0.50
D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein. 31 0.66
CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein. 31 0.66
BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear r... 31 0.66
BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear r... 31 0.66
BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein. 31 0.66
AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor pro... 31 0.66
AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein. 31 0.66
AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein. 31 0.66
AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein. 31 0.66
AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein. 31 0.66
AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein. 31 0.66
U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein. 31 0.87
M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein pr... 31 0.87
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 29 3.5
BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein ... 28 4.6
AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion pro... 28 4.6
AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein ... 28 4.6
>BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 332
Score = 31.9 bits (69), Expect = 0.38
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +2
Query: 71 GMRMNPDMDDDEKGKLFVGGLSW 139
G ++N ++++ GK+FVGGLSW
Sbjct: 57 GDQINASKNEEDAGKMFVGGLSW 79
>BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 31.9 bits (69), Expect = 0.38
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +2
Query: 71 GMRMNPDMDDDEKGKLFVGGLSW 139
G ++N ++++ GK+FVGGLSW
Sbjct: 57 GDQINASKNEEDAGKMFVGGLSW 79
>BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 31.9 bits (69), Expect = 0.38
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +2
Query: 71 GMRMNPDMDDDEKGKLFVGGLSW 139
G ++N ++++ GK+FVGGLSW
Sbjct: 57 GDQINASKNEEDAGKMFVGGLSW 79
>BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 31.9 bits (69), Expect = 0.38
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +2
Query: 71 GMRMNPDMDDDEKGKLFVGGLSW 139
G ++N ++++ GK+FVGGLSW
Sbjct: 57 GDQINASKNEEDAGKMFVGGLSW 79
>BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 31.9 bits (69), Expect = 0.38
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +2
Query: 71 GMRMNPDMDDDEKGKLFVGGLSW 139
G ++N ++++ GK+FVGGLSW
Sbjct: 57 GDQINASKNEEDAGKMFVGGLSW 79
>AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein AB isoform a variant protein.
Length = 332
Score = 31.9 bits (69), Expect = 0.38
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +2
Query: 71 GMRMNPDMDDDEKGKLFVGGLSW 139
G ++N ++++ GK+FVGGLSW
Sbjct: 57 GDQINASKNEEDAGKMFVGGLSW 79
>AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ40338 fis, clone TESTI2032067, highly similar to
Rattus norvegicus mRNA for type A/B hnRNP protein p40.
).
Length = 332
Score = 31.9 bits (69), Expect = 0.38
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +2
Query: 71 GMRMNPDMDDDEKGKLFVGGLSW 139
G ++N ++++ GK+FVGGLSW
Sbjct: 57 GDQINASKNEEDAGKMFVGGLSW 79
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 31.5 bits (68), Expect = 0.50
Identities = 9/23 (39%), Positives = 19/23 (82%)
Frame = +2
Query: 71 GMRMNPDMDDDEKGKLFVGGLSW 139
G +++ +++++GK+F+GGLSW
Sbjct: 63 GAKIDASKNEEDEGKMFIGGLSW 85
>AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 336
Score = 31.5 bits (68), Expect = 0.50
Identities = 9/23 (39%), Positives = 19/23 (82%)
Frame = +2
Query: 71 GMRMNPDMDDDEKGKLFVGGLSW 139
G +++ +++++GK+F+GGLSW
Sbjct: 65 GAKIDASKNEEDEGKMFIGGLSW 87
>D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein.
Length = 301
Score = 31.1 bits (67), Expect = 0.66
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 71 GMRMNPDMDDDEKGKLFVGGLSW 139
G ++N + + GK+F+GGLSW
Sbjct: 16 GSKINASKNQQDDGKMFIGGLSW 38
>CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein.
Length = 420
Score = 31.1 bits (67), Expect = 0.66
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 71 GMRMNPDMDDDEKGKLFVGGLSW 139
G ++N + + GK+F+GGLSW
Sbjct: 135 GSKINASKNQQDDGKMFIGGLSW 157
>BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear
ribonucleoprotein D-like protein.
Length = 420
Score = 31.1 bits (67), Expect = 0.66
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 71 GMRMNPDMDDDEKGKLFVGGLSW 139
G ++N + + GK+F+GGLSW
Sbjct: 135 GSKINASKNQQDDGKMFIGGLSW 157
>BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear
ribonucleoprotein D-like protein.
Length = 420
Score = 31.1 bits (67), Expect = 0.66
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 71 GMRMNPDMDDDEKGKLFVGGLSW 139
G ++N + + GK+F+GGLSW
Sbjct: 135 GSKINASKNQQDDGKMFIGGLSW 157
>BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein.
Length = 415
Score = 31.1 bits (67), Expect = 0.66
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 71 GMRMNPDMDDDEKGKLFVGGLSW 139
G ++N + + GK+F+GGLSW
Sbjct: 130 GSKINASKNQQDDGKMFIGGLSW 152
>AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor
protein.
Length = 298
Score = 31.1 bits (67), Expect = 0.66
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 71 GMRMNPDMDDDEKGKLFVGGLSW 139
G ++N + + GK+F+GGLSW
Sbjct: 13 GSKINASKNQQDDGKMFIGGLSW 35
>AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein.
Length = 420
Score = 31.1 bits (67), Expect = 0.66
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 71 GMRMNPDMDDDEKGKLFVGGLSW 139
G ++N + + GK+F+GGLSW
Sbjct: 135 GSKINASKNQQDDGKMFIGGLSW 157
>AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein.
Length = 244
Score = 31.1 bits (67), Expect = 0.66
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 71 GMRMNPDMDDDEKGKLFVGGLSW 139
G ++N + + GK+F+GGLSW
Sbjct: 16 GSKINASKNQQDDGKMFIGGLSW 38
>AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein.
Length = 420
Score = 31.1 bits (67), Expect = 0.66
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 71 GMRMNPDMDDDEKGKLFVGGLSW 139
G ++N + + GK+F+GGLSW
Sbjct: 135 GSKINASKNQQDDGKMFIGGLSW 157
>AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein.
Length = 301
Score = 31.1 bits (67), Expect = 0.66
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 71 GMRMNPDMDDDEKGKLFVGGLSW 139
G ++N + + GK+F+GGLSW
Sbjct: 16 GSKINASKNQQDDGKMFIGGLSW 38
>AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein.
Length = 420
Score = 31.1 bits (67), Expect = 0.66
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 71 GMRMNPDMDDDEKGKLFVGGLSW 139
G ++N + + GK+F+GGLSW
Sbjct: 135 GSKINASKNQQDDGKMFIGGLSW 157
>U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein.
Length = 331
Score = 30.7 bits (66), Expect = 0.87
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2
Query: 77 RMNPDMDDDEKGKLFVGGLSW 139
++N ++++ GK+FVGGLSW
Sbjct: 57 QINASKNEEDAGKMFVGGLSW 77
>M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein
protein.
Length = 284
Score = 30.7 bits (66), Expect = 0.87
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2
Query: 77 RMNPDMDDDEKGKLFVGGLSW 139
++N ++++ GK+FVGGLSW
Sbjct: 57 QINASKNEEDAGKMFVGGLSW 77
>D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 267
Score = 28.7 bits (61), Expect = 3.5
Identities = 8/15 (53%), Positives = 15/15 (100%)
Frame = +2
Query: 95 DDDEKGKLFVGGLSW 139
+++++GK+F+GGLSW
Sbjct: 4 NEEDEGKMFIGGLSW 18
>BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +2
Query: 101 DEKGKLFVGGLSW 139
DE GKLFVGGL W
Sbjct: 7 DEIGKLFVGGLDW 19
>AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion
protein protein.
Length = 454
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +2
Query: 101 DEKGKLFVGGLSW 139
DE GKLFVGGL W
Sbjct: 7 DEIGKLFVGGLDW 19
>AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +2
Query: 101 DEKGKLFVGGLSW 139
DE GKLFVGGL W
Sbjct: 7 DEIGKLFVGGLDW 19
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,642,026
Number of Sequences: 237096
Number of extensions: 327039
Number of successful extensions: 402
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 402
length of database: 76,859,062
effective HSP length: 26
effective length of database: 70,694,566
effective search space used: 1343196754
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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