Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14o18
         (452 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0463 - 8673313-8673639,8674040-8674126,8674710-8674790,867...    30   0.76 
11_04_0291 - 15851647-15852252,15853995-15854136,15854666-158548...    28   4.0  
10_08_0825 + 20831170-20831349,20831380-20831547,20831627-208316...    27   7.1  
02_05_0226 + 26971851-26972034,26972734-26972834,26972876-269729...    27   7.1  

>03_02_0463 -
           8673313-8673639,8674040-8674126,8674710-8674790,
           8674896-8675048,8675129-8675185,8675293-8675569,
           8675634-8675749,8676372-8676523,8676627-8676816,
           8676935-8677345
          Length = 616

 Score = 30.3 bits (65), Expect = 0.76
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 290 WQNALQCATAEDLFRGGRTHNKPCLDSPHNSPTLSIYYH 174
           W N  + AT ED F+ G++     L   HNS    I +H
Sbjct: 258 WVNLDRHATTEDAFQDGKSRLNLLLSKVHNSNVFYILFH 296


>11_04_0291 -
           15851647-15852252,15853995-15854136,15854666-15854881,
           15854957-15855052,15855147-15855259,15856516-15856727,
           15856842-15856939,15857066-15857186,15857291-15857508,
           15857657-15857837,15857919-15858207,15858303-15858367,
           15858480-15858591
          Length = 822

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -1

Query: 365 PV*SSLDEALFSIPCSLM*NANSAEWQNALQCATAEDLFRGG 240
           P+ S L   +   PC L  +A  A  QNA+  A  +DLF GG
Sbjct: 519 PLQSLLSAVVPLFPCELS-DARIAWSQNAILTAVVDDLFDGG 559


>10_08_0825 +
           20831170-20831349,20831380-20831547,20831627-20831698,
           20831997-20832075,20832182-20832375,20832469-20832558,
           20832851-20832940,20833196-20833282,20833477-20833560,
           20833690-20833809,20834096-20834103,20834443-20834575,
           20835044-20835125,20835330-20835496,20836006-20836493,
           20836551-20836638,20836716-20836818,20836932-20837083,
           20837191-20837316,20837459-20837529,20837691-20837753,
           20838418-20838490,20838972-20839040,20839180-20839257,
           20839434-20839484,20839586-20839696
          Length = 1008

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +2

Query: 218 SRVCCEFSRPEISPLRLRTAERFATLRCLHFT 313
           S +C +   P++ P  LRT +   +L C ++T
Sbjct: 395 SDLCAQVPEPKLRPCLLRTFQSLFSLMCSYYT 426


>02_05_0226 +
           26971851-26972034,26972734-26972834,26972876-26972978,
           26973335-26973477,26973525-26973605,26973929-26974015,
           26974097-26974239,26974746-26974896,26974973-26975095,
           26975362-26975445,26975531-26975718,26976726-26976900,
           26977008-26977129,26977231-26977310,26977532-26977590,
           26977921-26978075,26978680-26978858,26980050-26980162,
           26980243-26980413,26980552-26980680,26980756-26980856,
           26980942-26981059,26981739-26981818,26983230-26983302,
           26983865-26983950,26984025-26984076,26984221-26984352,
           26984560-26984628,26984912-26985004,26985806-26985901,
           26986710-26986808,26986894-26986986,26987459-26987608,
           26988391-26988549
          Length = 1323

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +1

Query: 304 AFYMSEQGIENKASSSEL*TGEVFKALNKTRGLYLRWQEICK 429
           AF  ++Q  E    S  +   +V K  +K RG+YLR    C+
Sbjct: 563 AFEYAQQAKELPLVSYRISINQVGKPTSKLRGIYLRGSNTCR 604


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,454,315
Number of Sequences: 37544
Number of extensions: 213950
Number of successful extensions: 461
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 461
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 883560296
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)