Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14o17
         (688 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81105-4|CAB03219.1|  299|Caenorhabditis elegans Hypothetical pr...    77   2e-14
Z81522-7|CAB04232.1|  297|Caenorhabditis elegans Hypothetical pr...    52   5e-07
Z19152-9|CAC35809.1|  364|Caenorhabditis elegans Hypothetical pr...    36   0.036
U12965-9|AAA20605.3|  522|Caenorhabditis elegans Hypothetical pr...    28   7.2  

>Z81105-4|CAB03219.1|  299|Caenorhabditis elegans Hypothetical
           protein R05D7.4 protein.
          Length = 299

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
 Frame = +1

Query: 256 PLVILHGLLGSKNNWNSMSKAIHRTTGRKVISVDARNHGDSRHSPQHTYVHMAHDVM--- 426
           PLVI+HGL G K NWNS+ KA+H+     V +VD RNHG S H+   +Y  MA D++   
Sbjct: 47  PLVIVHGLFGQKQNWNSVGKALHKKLEAPVYAVDVRNHGSSPHTETMSYTEMAEDLVLFI 106

Query: 427 -RXXXXXXXXXXXXXGHSMGGRTAMVLSL 510
            +             GHSMGG+  M L++
Sbjct: 107 DKVKEETKKTRVNLLGHSMGGKIVMRLAI 135


>Z81522-7|CAB04232.1|  297|Caenorhabditis elegans Hypothetical
           protein F32B4.6 protein.
          Length = 297

 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
 Frame = +1

Query: 256 PLVILHGLLGSKNNWNSMSKAIHRTTGRKVISVDARNHGDSRHSPQHTYVHMAHDVMR-- 429
           PL+++ GL G+K NW  + K + +  G  V +V+ RNHG    +   TY  MA D++   
Sbjct: 37  PLILVPGLFGTKENWIQVGKDLSQRLGCMVFAVENRNHGSFSKAASMTYEEMADDLVGFI 96

Query: 430 --XXXXXXXXXXXXXGHSMGGRTAMVLS 507
                          GHSMGG+    L+
Sbjct: 97  DWVRKITGEDKVNLHGHSMGGKAVTQLA 124


>Z19152-9|CAC35809.1|  364|Caenorhabditis elegans Hypothetical
           protein B0464.9 protein.
          Length = 364

 Score = 35.5 bits (78), Expect = 0.036
 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
 Frame = +1

Query: 253 PPLVILHGLLGSKNNWNSMSKAIHRTTGRKVISVDARNHGDSRHSPQH-----TYVHMAH 417
           P   +LHG   S   W   +K +      +V++ D R HGD++ S +H     T +    
Sbjct: 85  PIFYLLHGGGYSGLTWACFAKELATLISCRVVAPDLRGHGDTKCSDEHDLSKETQIKDIG 144

Query: 418 DVMRXXXXXXXXXXXXXGHSMGGRTAM 498
            + +             GHSMGG  A+
Sbjct: 145 AIFKNIFGEDDSPVCIVGHSMGGALAI 171


>U12965-9|AAA20605.3|  522|Caenorhabditis elegans Hypothetical
           protein F23F12.3 protein.
          Length = 522

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 529 VRNLHIAVIAPWQFGLPYCAQAVIPL 452
           +   HI     WQFGL Y  Q + P+
Sbjct: 6   INRFHILCFFLWQFGLFYACQLIFPI 31


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,721,161
Number of Sequences: 27780
Number of extensions: 280750
Number of successful extensions: 705
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)