Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14o11
(624 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear ... 107 2e-23
AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear r... 107 2e-23
AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear r... 99 1e-20
S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear rib... 87 6e-17
CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein. 87 6e-17
BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear r... 87 6e-17
BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear r... 87 6e-17
AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear ... 87 6e-17
AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear ... 87 6e-17
X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulate... 86 1e-16
AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear r... 85 2e-16
AL354733-8|CAI16018.1| 306|Homo sapiens heterogeneous nuclear r... 75 2e-13
BC004153-1|AAH04153.1| 403|Homo sapiens poly(rC) binding protei... 53 9e-07
BC003008-1|AAH03008.1| 403|Homo sapiens poly(rC) binding protei... 53 9e-07
AK023993-1|BAB14761.1| 403|Homo sapiens protein ( Homo sapiens ... 53 9e-07
AF176330-1|AAG09241.1| 403|Homo sapiens alphaCP-4 protein. 53 9e-07
AF257771-1|AAG02185.1| 369|Homo sapiens RNA binding protein MCG... 50 7e-06
BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein. 49 1e-05
AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protei... 49 1e-05
AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens ... 49 1e-05
AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein. 49 1e-05
AF092441-1|AAP97216.1| 397|Homo sapiens CBP protein. 47 6e-05
Z29505-1|CAA82631.1| 299|Homo sapiens sub2.3 protein. 46 8e-05
X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein. 46 8e-05
U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein. 46 8e-05
BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protei... 46 8e-05
AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein. 46 8e-05
X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein. 46 1e-04
BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein. 46 1e-04
BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protei... 46 1e-04
BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protei... 46 1e-04
AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protei... 46 1e-04
AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protei... 46 1e-04
BC017098-1|AAH17098.1| 360|Homo sapiens PCBP4 protein protein. 44 4e-04
AF257772-1|AAG02186.1| 424|Homo sapiens RNA binding protein MCG... 42 0.002
AF257770-1|AAG02184.1| 424|Homo sapiens RNA binding protein MCG... 42 0.002
AF141340-1|AAG49443.1| 276|Homo sapiens LYST-interacting protei... 41 0.004
AL589765-14|CAI17175.1| 516|Homo sapiens tudor and KH domain co... 40 0.005
AL589765-13|CAI17177.1| 561|Homo sapiens tudor and KH domain co... 40 0.005
AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH domain-con... 40 0.005
AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding pr... 40 0.005
U69127-1|AAC50893.1| 600|Homo sapiens FUSE binding protein 3 pr... 40 0.009
BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein. 40 0.009
BC007874-1|AAH07874.1| 261|Homo sapiens FUBP3 protein protein. 40 0.009
AL359092-4|CAM45745.1| 261|Homo sapiens far upstream element (F... 40 0.009
AL359092-2|CAM45743.1| 572|Homo sapiens far upstream element (F... 40 0.009
AL353695-2|CAH70961.1| 261|Homo sapiens far upstream element (F... 40 0.009
AL353695-1|CAH70960.1| 572|Homo sapiens far upstream element (F... 40 0.009
U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein prot... 38 0.029
BC010083-1|AAH10083.1| 304|Homo sapiens FUBP1 protein protein. 38 0.029
BC067878-1|AAH67878.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 38 0.038
BC051703-1|AAH51703.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 38 0.038
AY039237-1|AAK72102.1| 630|Homo sapiens DEAD-box protein CAGE p... 38 0.038
U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein. 37 0.050
U69126-1|AAC50892.1| 652|Homo sapiens FUSE binding protein 2 pr... 37 0.050
BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein. 37 0.050
AB209366-1|BAD92603.1| 493|Homo sapiens far upstream element-bi... 37 0.050
AB209662-1|BAD92899.1| 384|Homo sapiens KH-type splicing regula... 36 0.15
U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like RNA-... 35 0.27
AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nov... 35 0.27
U04840-1|AAA16022.1| 510|Homo sapiens onconeural ventral antige... 34 0.36
BC075039-1|AAH75039.1| 507|Homo sapiens neuro-oncological ventr... 34 0.36
BC075038-1|AAH75038.1| 507|Homo sapiens neuro-oncological ventr... 34 0.36
BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth fac... 34 0.36
AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding pro... 34 0.36
AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinom... 34 0.36
AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nov... 34 0.47
M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein ... 32 1.4
BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein. 32 1.4
BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotei... 32 1.4
AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein. 32 1.4
BC066938-1|AAH66938.1| 648|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 31 2.5
AJ278110-1|CAB92442.1| 648|Homo sapiens DEAD-box protein protein. 31 2.5
AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens ... 31 3.3
AK001746-1|BAA91878.1| 440|Homo sapiens protein ( Homo sapiens ... 31 3.3
AL162739-7|CAI19299.1| 865|Homo sapiens novel protein (FLJ10884... 31 4.4
AK001973-1|BAA92011.1| 865|Homo sapiens protein ( Homo sapiens ... 31 4.4
BC111559-1|AAI11560.1| 865|Homo sapiens LINE-1 type transposase... 30 5.8
AB211065-1|BAD95492.1| 865|Homo sapiens ES cell associated tran... 30 5.8
>AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 379
Score = 107 bits (258), Expect = 2e-23
Identities = 62/139 (44%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
Frame = +2
Query: 209 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 382
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 383 LSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKI 562
LSI+A D ET+ EI+K I+P L E+ + GS D + ++R+LIHQS AG +IG G+KI
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEYQHYKGS---DFDCELRLLIHQSLAGGIIGVKGAKI 143
Query: 563 KELREKTGARLKIFSNSAP 619
KELRE T +K+F P
Sbjct: 144 KELRENTQTTIKLFQECCP 162
>AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear
ribonucleoprotein K isoform a variant protein.
Length = 442
Score = 107 bits (258), Expect = 2e-23
Identities = 62/139 (44%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
Frame = +2
Query: 209 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 382
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 30 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 89
Query: 383 LSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKI 562
LSI+A D ET+ EI+K I+P L E+ + GS D + ++R+LIHQS AG +IG G+KI
Sbjct: 90 LSISA-DIETIGEILKKIIPTLEEYQHYKGS---DFDCELRLLIHQSLAGGIIGVKGAKI 145
Query: 563 KELREKTGARLKIFSNSAP 619
KELRE T +K+F P
Sbjct: 146 KELRENTQTTIKLFQECCP 164
>AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 428
Score = 98.7 bits (235), Expect = 1e-20
Identities = 51/99 (51%), Positives = 69/99 (69%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDV 502
LR+ Y AS++VPD GPER+LSI+A D ET+ EI+K I+P L E+ + GS D + ++
Sbjct: 57 LRTDYNASVSVPDSSGPERILSISA-DIETIGEILKKIIPTLEEYQHYKGS---DFDCEL 112
Query: 503 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
R+LIHQS AG +IG G+KIKELRE T +K+F P
Sbjct: 113 RLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCP 151
>S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein complex K protein.
Length = 463
Score = 86.6 bits (205), Expect = 6e-17
Identities = 61/160 (38%), Positives = 83/160 (51%), Gaps = 23/160 (14%)
Frame = +2
Query: 209 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 382
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 383 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 499
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 500 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+R+LIHQS AG +IG G+KIKELRE T +K+F P
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCP 186
>CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein.
Length = 464
Score = 86.6 bits (205), Expect = 6e-17
Identities = 61/160 (38%), Positives = 83/160 (51%), Gaps = 23/160 (14%)
Frame = +2
Query: 209 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 382
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 383 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 499
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 500 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+R+LIHQS AG +IG G+KIKELRE T +K+F P
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCP 186
>BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 86.6 bits (205), Expect = 6e-17
Identities = 61/160 (38%), Positives = 83/160 (51%), Gaps = 23/160 (14%)
Frame = +2
Query: 209 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 382
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 383 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 499
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 500 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+R+LIHQS AG +IG G+KIKELRE T +K+F P
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCP 186
>BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 86.6 bits (205), Expect = 6e-17
Identities = 61/160 (38%), Positives = 83/160 (51%), Gaps = 23/160 (14%)
Frame = +2
Query: 209 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 382
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 383 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 499
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 500 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+R+LIHQS AG +IG G+KIKELRE T +K+F P
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCP 186
>AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 86.6 bits (205), Expect = 6e-17
Identities = 61/160 (38%), Positives = 83/160 (51%), Gaps = 23/160 (14%)
Frame = +2
Query: 209 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 382
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 383 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 499
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 500 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+R+LIHQS AG +IG G+KIKELRE T +K+F P
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCP 186
>AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 86.6 bits (205), Expect = 6e-17
Identities = 61/160 (38%), Positives = 83/160 (51%), Gaps = 23/160 (14%)
Frame = +2
Query: 209 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 382
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 383 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 499
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 500 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+R+LIHQS AG +IG G+KIKELRE T +K+F P
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCP 186
>X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulated
nuclear protein protein.
Length = 464
Score = 85.8 bits (203), Expect = 1e-16
Identities = 60/154 (38%), Positives = 80/154 (51%), Gaps = 23/154 (14%)
Frame = +2
Query: 227 KRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERVLSITAE 400
KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+LSI+A
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISA- 92
Query: 401 DDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELDVRMLIH 517
D ET+ EI+K I+P L E N + D + ++R+LIH
Sbjct: 93 DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIH 152
Query: 518 QSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
QS AG +IG G+KIKELRE T +K+F P
Sbjct: 153 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCP 186
>AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K transcript variant protein.
Length = 464
Score = 85.0 bits (201), Expect = 2e-16
Identities = 60/160 (37%), Positives = 82/160 (51%), Gaps = 23/160 (14%)
Frame = +2
Query: 209 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 382
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 383 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 499
LSI+ D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSIST-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 500 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+R+LIHQS AG +IG G+KIKELRE T +K+F P
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCP 186
>AL354733-8|CAI16018.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 306
Score = 75.4 bits (177), Expect = 2e-13
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 21/117 (17%)
Frame = +2
Query: 332 QYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCL--------------------- 448
QY AS++VPD GPER+LSI+A D ET+ EI+K I+P L
Sbjct: 2 QYNASVSVPDSSGPERILSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDA 60
Query: 449 AEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
E N + D + ++R+LIHQS AG +IG G+KIKELRE T +K+F P
Sbjct: 61 VECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCP 117
>BC004153-1|AAH04153.1| 403|Homo sapiens poly(rC) binding protein 4
protein.
Length = 403
Score = 52.8 bits (121), Expect = 9e-07
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 487
+R Q A IT+ + PER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 488 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+ +R++I S+ G +IGKAG+KIKE+RE TGA++++ + P
Sbjct: 100 PPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLP 143
Score = 44.0 bits (99), Expect = 4e-04
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
L +RML+H G +IGK G +K +RE++ AR+ I S P+
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPE 60
Score = 40.7 bits (91), Expect = 0.004
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 482 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
G Q L+ GCVIG+ GSKI E+R+ +GA +KI
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>BC003008-1|AAH03008.1| 403|Homo sapiens poly(rC) binding protein 4
protein.
Length = 403
Score = 52.8 bits (121), Expect = 9e-07
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 487
+R Q A IT+ + PER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 488 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+ +R++I S+ G +IGKAG+KIKE+RE TGA++++ + P
Sbjct: 100 PPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLP 143
Score = 44.0 bits (99), Expect = 4e-04
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
L +RML+H G +IGK G +K +RE++ AR+ I S P+
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPE 60
Score = 40.7 bits (91), Expect = 0.004
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 482 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
G Q L+ GCVIG+ GSKI E+R+ +GA +KI
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>AK023993-1|BAB14761.1| 403|Homo sapiens protein ( Homo sapiens
cDNA FLJ13931 fis, clone Y79AA1000752, moderately
similar to PUTATIVE HETEROGENEOUS NUCLEAR
RIBONUCLEOPROTEIN X. ).
Length = 403
Score = 52.8 bits (121), Expect = 9e-07
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 487
+R Q A IT+ + PER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 488 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+ +R++I S+ G +IGKAG+KIKE+RE TGA++++ + P
Sbjct: 100 PPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLP 143
Score = 44.0 bits (99), Expect = 4e-04
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
L +RML+H G +IGK G +K +RE++ AR+ I S P+
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPE 60
Score = 40.7 bits (91), Expect = 0.004
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 482 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
G Q L+ GCVIG+ GSKI E+R+ +GA +KI
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>AF176330-1|AAG09241.1| 403|Homo sapiens alphaCP-4 protein.
Length = 403
Score = 52.8 bits (121), Expect = 9e-07
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 487
+R Q A IT+ + PER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 488 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+ +R++I S+ G +IGKAG+KIKE+RE TGA++++ + P
Sbjct: 100 PPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLP 143
Score = 44.0 bits (99), Expect = 4e-04
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
L +RML+H G +IGK G +K +RE++ AR+ I S P+
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPE 60
Score = 40.7 bits (91), Expect = 0.004
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 482 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
G Q L+ GCVIG+ GSKI E+R+ +GA +KI
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>AF257771-1|AAG02185.1| 369|Homo sapiens RNA binding protein MCG10
protein.
Length = 369
Score = 50.0 bits (114), Expect = 7e-06
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Frame = +2
Query: 332 QYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGDQEL 496
Q A IT+ + PER+ +IT +++ D C A + G + +
Sbjct: 12 QSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSRPPV 68
Query: 497 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+R++I S+ G +IGKAG+KIKE+RE TGA++++ + P
Sbjct: 69 TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLP 109
Score = 40.7 bits (91), Expect = 0.004
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 482 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
G Q L+ GCVIG+ GSKI E+R+ +GA +KI
Sbjct: 204 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 243
>BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein.
Length = 313
Score = 49.2 bits (112), Expect = 1e-05
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQE--L 496
+R + A I + + PER+++IT D + N + + +
Sbjct: 39 MREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
Query: 497 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+R+++ S+ G +IGK GSKIKE+RE TGA++++ + P
Sbjct: 99 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP 139
Score = 45.6 bits (103), Expect = 1e-04
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
L +R+L+H G +IGK G +K++RE++GAR+ I + P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPE 56
Score = 36.7 bits (81), Expect = 0.067
Identities = 13/24 (54%), Positives = 21/24 (87%)
Frame = +2
Query: 530 GCVIGKAGSKIKELREKTGARLKI 601
GC+IG+ G+KI E+R+ +GA++KI
Sbjct: 248 GCIIGRQGTKINEIRQMSGAQIKI 271
>AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protein 3
protein.
Length = 361
Score = 49.2 bits (112), Expect = 1e-05
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQE--L 496
+R + A I + + PER+++IT D + N + + +
Sbjct: 39 MREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
Query: 497 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+R+++ S+ G +IGK GSKIKE+RE TGA++++ + P
Sbjct: 99 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP 139
Score = 45.6 bits (103), Expect = 1e-04
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
L +R+L+H G +IGK G +K++RE++GAR+ I + P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPE 56
Score = 36.7 bits (81), Expect = 0.067
Identities = 13/24 (54%), Positives = 21/24 (87%)
Frame = +2
Query: 530 GCVIGKAGSKIKELREKTGARLKI 601
GC+IG+ G+KI E+R+ +GA++KI
Sbjct: 296 GCIIGRQGTKINEIRQMSGAQIKI 319
>AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens
cDNA FLJ36982 fis, clone BRACE2006488, highly similar to
POLY(RC) BINDING PROTEIN 2. ).
Length = 351
Score = 49.2 bits (112), Expect = 1e-05
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQE--L 496
+R + A I + + PER+++IT D + N + + +
Sbjct: 71 MREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
Query: 497 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+R+++ S+ G +IGK GSKIKE+RE TGA++++ + P
Sbjct: 131 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP 171
Score = 45.6 bits (103), Expect = 1e-04
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
L +R+L+H G +IGK G +K++RE++GAR+ I + P+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPE 88
Score = 36.7 bits (81), Expect = 0.067
Identities = 13/24 (54%), Positives = 21/24 (87%)
Frame = +2
Query: 530 GCVIGKAGSKIKELREKTGARLKI 601
GC+IG+ G+KI E+R+ +GA++KI
Sbjct: 286 GCIIGRQGTKINEIRQMSGAQIKI 309
>AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein.
Length = 339
Score = 49.2 bits (112), Expect = 1e-05
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQE--L 496
+R + A I + + PER+++IT D + N + + +
Sbjct: 39 MREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
Query: 497 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+R+++ S+ G +IGK GSKIKE+RE TGA++++ + P
Sbjct: 99 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP 139
Score = 45.6 bits (103), Expect = 1e-04
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
L +R+L+H G +IGK G +K++RE++GAR+ I + P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPE 56
Score = 36.7 bits (81), Expect = 0.067
Identities = 13/24 (54%), Positives = 21/24 (87%)
Frame = +2
Query: 530 GCVIGKAGSKIKELREKTGARLKI 601
GC+IG+ G+KI E+R+ +GA++KI
Sbjct: 274 GCIIGRQGTKINEIRQMSGAQIKI 297
>AF092441-1|AAP97216.1| 397|Homo sapiens CBP protein.
Length = 397
Score = 46.8 bits (106), Expect = 6e-05
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 487
+R Q A IT+ + ER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSFLERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 488 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+ +R++I S+ G +IG+AG+KIKE+RE TGA++++ + P
Sbjct: 100 PPVTLRLVIPASQCGSLIGQAGTKIKEIRETTGAQVQVAGDLFP 143
Score = 40.7 bits (91), Expect = 0.004
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 482 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
G Q L+ GCVIG+ GSKI E+R+ +GA +KI
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 40.3 bits (90), Expect = 0.005
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS 613
L +RML+H G +IGK G +K +RE++ AR+ I S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS 57
>Z29505-1|CAA82631.1| 299|Homo sapiens sub2.3 protein.
Length = 299
Score = 46.4 bits (105), Expect = 8e-05
Identities = 27/102 (26%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 493
+R + A I + + PER++++T + + + I+ L E N +
Sbjct: 39 IREESGARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPP 97
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+ +R+++ ++ G +IGK G KIKE+RE TGA++++ + P
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139
Score = 45.6 bits (103), Expect = 1e-04
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +2
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
L +R+L+H G +IGK G +K +RE++GAR+ I + P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPE 56
>X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein.
Length = 356
Score = 46.4 bits (105), Expect = 8e-05
Identities = 27/102 (26%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 493
+R + A I + + PER++++T + + + I+ L E N +
Sbjct: 39 IREESGARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPP 97
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+ +R+++ ++ G +IGK G KIKE+RE TGA++++ + P
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139
Score = 45.6 bits (103), Expect = 1e-04
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +2
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
L +R+L+H G +IGK G +K +RE++GAR+ I + P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPE 56
Score = 35.1 bits (77), Expect = 0.20
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 506 MLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
+ I + GC+IG+ G+ I E+R+ +GA++KI
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
>U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein.
Length = 356
Score = 46.4 bits (105), Expect = 8e-05
Identities = 27/102 (26%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 493
+R + A I + + PER++++T + + + I+ L E N +
Sbjct: 39 IREESGARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPP 97
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+ +R+++ ++ G +IGK G KIKE+RE TGA++++ + P
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139
Score = 45.6 bits (103), Expect = 1e-04
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +2
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
L +R+L+H G +IGK G +K +RE++GAR+ I + P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPE 56
Score = 35.1 bits (77), Expect = 0.20
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 506 MLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
+ I + GC+IG+ G+ I E+R+ +GA++KI
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
>BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protein 1
protein.
Length = 356
Score = 46.4 bits (105), Expect = 8e-05
Identities = 27/102 (26%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 493
+R + A I + + PER++++T + + + I+ L E N +
Sbjct: 39 IREESGARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPP 97
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+ +R+++ ++ G +IGK G KIKE+RE TGA++++ + P
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139
Score = 45.6 bits (103), Expect = 1e-04
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +2
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
L +R+L+H G +IGK G +K +RE++GAR+ I + P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPE 56
Score = 35.1 bits (77), Expect = 0.20
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 506 MLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
+ I + GC+IG+ G+ I E+R+ +GA++KI
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
>AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein.
Length = 356
Score = 46.4 bits (105), Expect = 8e-05
Identities = 27/102 (26%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 493
+R + A I + + PER++++T + + + I+ L E N +
Sbjct: 39 IREESGARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPP 97
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+ +R+++ ++ G +IGK G KIKE+RE TGA++++ + P
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139
Score = 45.6 bits (103), Expect = 1e-04
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +2
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
L +R+L+H G +IGK G +K +RE++GAR+ I + P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPE 56
Score = 35.1 bits (77), Expect = 0.20
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 506 MLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
+ I + GC+IG+ G+ I E+R+ +GA++KI
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
>X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein.
Length = 365
Score = 46.0 bits (104), Expect = 1e-04
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
L +R+L+H G +IGK G +K++RE++GAR+ I + P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPE 56
Score = 44.0 bits (99), Expect = 4e-04
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 493
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 39 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 97
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+ +R+++ S+ G +IGK G KIKE+RE TGA++++ + P
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139
Score = 36.7 bits (81), Expect = 0.067
Identities = 13/24 (54%), Positives = 21/24 (87%)
Frame = +2
Query: 530 GCVIGKAGSKIKELREKTGARLKI 601
GC+IG+ G+KI E+R+ +GA++KI
Sbjct: 300 GCIIGRQGAKINEIRQMSGAQIKI 323
>BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein.
Length = 335
Score = 46.0 bits (104), Expect = 1e-04
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
L +R+L+H G +IGK G +K++RE++GAR+ I + P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPE 56
Score = 44.0 bits (99), Expect = 4e-04
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 493
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 39 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 97
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+ +R+++ S+ G +IGK G KIKE+RE TGA++++ + P
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139
Score = 36.7 bits (81), Expect = 0.067
Identities = 13/24 (54%), Positives = 21/24 (87%)
Frame = +2
Query: 530 GCVIGKAGSKIKELREKTGARLKI 601
GC+IG+ G+KI E+R+ +GA++KI
Sbjct: 270 GCIIGRQGAKINEIRQMSGAQIKI 293
>BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protein 2
protein.
Length = 366
Score = 46.0 bits (104), Expect = 1e-04
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
L +R+L+H G +IGK G +K++RE++GAR+ I + P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPE 56
Score = 44.0 bits (99), Expect = 4e-04
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 493
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 39 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 97
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+ +R+++ S+ G +IGK G KIKE+RE TGA++++ + P
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139
Score = 36.7 bits (81), Expect = 0.067
Identities = 13/24 (54%), Positives = 21/24 (87%)
Frame = +2
Query: 530 GCVIGKAGSKIKELREKTGARLKI 601
GC+IG+ G+KI E+R+ +GA++KI
Sbjct: 301 GCIIGRQGAKINEIRQMSGAQIKI 324
>BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protein 2
protein.
Length = 362
Score = 46.0 bits (104), Expect = 1e-04
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
L +R+L+H G +IGK G +K++RE++GAR+ I + P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPE 56
Score = 44.0 bits (99), Expect = 4e-04
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 493
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 39 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 97
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+ +R+++ S+ G +IGK G KIKE+RE TGA++++ + P
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139
Score = 36.7 bits (81), Expect = 0.067
Identities = 13/24 (54%), Positives = 21/24 (87%)
Frame = +2
Query: 530 GCVIGKAGSKIKELREKTGARLKI 601
GC+IG+ G+KI E+R+ +GA++KI
Sbjct: 297 GCIIGRQGAKINEIRQMSGAQIKI 320
>AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protein 2
isoform b variant protein.
Length = 373
Score = 46.0 bits (104), Expect = 1e-04
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
L +R+L+H G +IGK G +K++RE++GAR+ I + P+
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPE 68
Score = 44.0 bits (99), Expect = 4e-04
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 493
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 51 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 109
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+ +R+++ S+ G +IGK G KIKE+RE TGA++++ + P
Sbjct: 110 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 151
Score = 36.7 bits (81), Expect = 0.067
Identities = 13/24 (54%), Positives = 21/24 (87%)
Frame = +2
Query: 530 GCVIGKAGSKIKELREKTGARLKI 601
GC+IG+ G+KI E+R+ +GA++KI
Sbjct: 308 GCIIGRQGAKINEIRQMSGAQIKI 331
>AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protein 2
protein.
Length = 331
Score = 46.0 bits (104), Expect = 1e-04
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
L +R+L+H G +IGK G +K++RE++GAR+ I + P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPE 56
Score = 44.0 bits (99), Expect = 4e-04
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 493
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 39 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 97
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+ +R+++ S+ G +IGK G KIKE+RE TGA++++ + P
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139
Score = 36.7 bits (81), Expect = 0.067
Identities = 13/24 (54%), Positives = 21/24 (87%)
Frame = +2
Query: 530 GCVIGKAGSKIKELREKTGARLKI 601
GC+IG+ G+KI E+R+ +GA++KI
Sbjct: 266 GCIIGRQGAKINEIRQMSGAQIKI 289
>BC017098-1|AAH17098.1| 360|Homo sapiens PCBP4 protein protein.
Length = 360
Score = 44.0 bits (99), Expect = 4e-04
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 494 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
L +RML+H G +IGK G +K +RE++ AR+ I S P+
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPE 60
Score = 43.6 bits (98), Expect = 6e-04
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 487
+R Q A IT+ + PER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 488 QELDVRMLIHQSRAGCVIGKAGSKIKELRE 577
+ +R++I S+ G +IGKAG+KIKE+RE
Sbjct: 100 PPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Score = 40.7 bits (91), Expect = 0.004
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 482 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
G Q L+ GCVIG+ GSKI E+R+ +GA +KI
Sbjct: 195 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 234
>AF257772-1|AAG02186.1| 424|Homo sapiens RNA binding protein MCG10
protein.
Length = 424
Score = 41.9 bits (94), Expect = 0.002
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Frame = +2
Query: 332 QYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGDQEL 496
Q A IT+ + PER+ +IT +++ D C A + G + +
Sbjct: 12 QSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSRPPV 68
Query: 497 DVRMLIHQSRAGCVIGKAGSKIKELREKTG 586
+R++I S+ G +IGKAG+KIKE+RE G
Sbjct: 69 TLRLVIPASQCGSLIGKAGTKIKEIREVRG 98
Score = 40.7 bits (91), Expect = 0.004
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 482 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
G Q L+ GCVIG+ GSKI E+R+ +GA +KI
Sbjct: 259 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 298
>AF257770-1|AAG02184.1| 424|Homo sapiens RNA binding protein MCG10
protein.
Length = 424
Score = 41.9 bits (94), Expect = 0.002
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Frame = +2
Query: 332 QYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGDQEL 496
Q A IT+ + PER+ +IT +++ D C A + G + +
Sbjct: 12 QSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSRPPV 68
Query: 497 DVRMLIHQSRAGCVIGKAGSKIKELREKTG 586
+R++I S+ G +IGKAG+KIKE+RE G
Sbjct: 69 TLRLVIPASQCGSLIGKAGTKIKEIREVRG 98
Score = 40.7 bits (91), Expect = 0.004
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 482 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
G Q L+ GCVIG+ GSKI E+R+ +GA +KI
Sbjct: 259 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 298
>AF141340-1|AAG49443.1| 276|Homo sapiens LYST-interacting protein
LIP4 protein.
Length = 276
Score = 40.7 bits (91), Expect = 0.004
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 482 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
G Q L+ GCVIG+ GSKI E+R+ +GA +KI
Sbjct: 81 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 120
>AL589765-14|CAI17175.1| 516|Homo sapiens tudor and KH domain
containing protein.
Length = 516
Score = 40.3 bits (90), Expect = 0.005
Identities = 14/41 (34%), Positives = 29/41 (70%)
Frame = +2
Query: 479 MGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
+G+ ++++ M + Q +IG+ G+ IK+LR++TGAR+ +
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV 88
>AL589765-13|CAI17177.1| 561|Homo sapiens tudor and KH domain
containing protein.
Length = 561
Score = 40.3 bits (90), Expect = 0.005
Identities = 14/41 (34%), Positives = 29/41 (70%)
Frame = +2
Query: 479 MGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
+G+ ++++ M + Q +IG+ G+ IK+LR++TGAR+ +
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV 88
>AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH
domain-containing protein protein.
Length = 561
Score = 40.3 bits (90), Expect = 0.005
Identities = 14/41 (34%), Positives = 29/41 (70%)
Frame = +2
Query: 479 MGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
+G+ ++++ M + Q +IG+ G+ IK+LR++TGAR+ +
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV 88
>AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding
protein protein.
Length = 606
Score = 40.3 bits (90), Expect = 0.005
Identities = 14/41 (34%), Positives = 29/41 (70%)
Frame = +2
Query: 479 MGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
+G+ ++++ M + Q +IG+ G+ IK+LR++TGAR+ +
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV 88
>U69127-1|AAC50893.1| 600|Homo sapiens FUSE binding protein 3
protein.
Length = 600
Score = 39.5 bits (88), Expect = 0.009
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Frame = +2
Query: 233 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 400
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 101 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 160
Query: 401 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 571
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 161 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 216
Query: 572 REKTGARL 595
+E+TG ++
Sbjct: 217 QERTGVKM 224
>BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein.
Length = 653
Score = 39.5 bits (88), Expect = 0.009
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Frame = +2
Query: 191 KRDAYGDDGPAQKRHRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITV-PDCP 367
+ D++G P + +++ + +P + ++ + I + PD
Sbjct: 81 QNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSG 140
Query: 368 G-PERVLSITAEDDET------LVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSR 526
G PER +T + L +I++ P FH+ G QE+ +I S+
Sbjct: 141 GLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPG-FHHGDGPGNAVQEI----MIPASK 195
Query: 527 AGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
AG VIGK G IK+L+E+ G ++ + PQ
Sbjct: 196 AGLVIGKGGETIKQLQERAGVKM-VMIQDGPQ 226
Score = 33.9 bits (74), Expect = 0.47
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 497 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+ ++ + G +IGK G IK + +++GAR+++ N P
Sbjct: 377 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPP 417
>BC007874-1|AAH07874.1| 261|Homo sapiens FUBP3 protein protein.
Length = 261
Score = 39.5 bits (88), Expect = 0.009
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Frame = +2
Query: 233 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 400
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 13 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 72
Query: 401 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 571
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 73 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 128
Query: 572 REKTGARL 595
+E+TG ++
Sbjct: 129 QERTGVKM 136
>AL359092-4|CAM45745.1| 261|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 261
Score = 39.5 bits (88), Expect = 0.009
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Frame = +2
Query: 233 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 400
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 13 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 72
Query: 401 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 571
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 73 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 128
Query: 572 REKTGARL 595
+E+TG ++
Sbjct: 129 QERTGVKM 136
>AL359092-2|CAM45743.1| 572|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 572
Score = 39.5 bits (88), Expect = 0.009
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Frame = +2
Query: 233 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 400
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 73 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 132
Query: 401 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 571
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 133 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 188
Query: 572 REKTGARL 595
+E+TG ++
Sbjct: 189 QERTGVKM 196
>AL353695-2|CAH70961.1| 261|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 261
Score = 39.5 bits (88), Expect = 0.009
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Frame = +2
Query: 233 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 400
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 13 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 72
Query: 401 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 571
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 73 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 128
Query: 572 REKTGARL 595
+E+TG ++
Sbjct: 129 QERTGVKM 136
>AL353695-1|CAH70960.1| 572|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 572
Score = 39.5 bits (88), Expect = 0.009
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Frame = +2
Query: 233 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 400
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 73 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 132
Query: 401 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 571
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 133 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 188
Query: 572 REKTGARL 595
+E+TG ++
Sbjct: 189 QERTGVKM 196
>U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein
protein.
Length = 644
Score = 37.9 bits (84), Expect = 0.029
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Frame = +2
Query: 356 PDCPG-PERVLSITAEDDET------LVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLI 514
PD G PER +T + L +I++ P FH+ G QE+ +I
Sbjct: 138 PDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPG-FHHGDGPGNAVQEI----MI 192
Query: 515 HQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
S+AG VIGK G IK+L+E+ G ++ + PQ
Sbjct: 193 PASKAGLVIGKGGETIKQLQERAGVKM-VMIQDGPQ 227
Score = 33.9 bits (74), Expect = 0.47
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 497 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+ ++ + G +IGK G IK + +++GAR+++ N P
Sbjct: 378 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPP 418
>BC010083-1|AAH10083.1| 304|Homo sapiens FUBP1 protein protein.
Length = 304
Score = 37.9 bits (84), Expect = 0.029
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Frame = +2
Query: 356 PDCPG-PERVLSITAEDDET------LVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLI 514
PD G PER +T + L +I++ P FH+ G QE+ +I
Sbjct: 138 PDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPG-FHHGDGPGNAVQEI----MI 192
Query: 515 HQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
S+AG VIGK G IK+L+E+ G ++ + PQ
Sbjct: 193 PASKAGLVIGKGGETIKQLQERAGVKM-VMIQDGPQ 227
>BC067878-1|AAH67878.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 53 protein.
Length = 631
Score = 37.5 bits (83), Expect = 0.038
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 455 FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA 616
F +QG G +E + I + G VIG +GSKIK+L+ T +++I + +
Sbjct: 36 FGHQGPRAAGSREPPLCFKIKNNMVGVVIGYSGSKIKDLQHSTNTKIQIINGES 89
>BC051703-1|AAH51703.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 53 protein.
Length = 631
Score = 37.5 bits (83), Expect = 0.038
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 455 FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA 616
F +QG G +E + I + G VIG +GSKIK+L+ T +++I + +
Sbjct: 36 FGHQGPRAAGSREPPLCFKIKNNMVGVVIGYSGSKIKDLQHSTNTKIQIINGES 89
>AY039237-1|AAK72102.1| 630|Homo sapiens DEAD-box protein CAGE
protein.
Length = 630
Score = 37.5 bits (83), Expect = 0.038
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 455 FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA 616
F +QG G +E + I + G VIG +GSKIK+L+ T +++I + +
Sbjct: 36 FGHQGPRAAGSREPPLCFKIKNNMVGVVIGYSGSKIKDLQHSTNTKIQIINGES 89
>U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein.
Length = 711
Score = 37.1 bits (82), Expect = 0.050
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Frame = +2
Query: 356 PDCPG-PERVLSITA--EDDETLVEIIKDIMPC-----LAEFH-NQGGSRMGDQELDVRM 508
PD G PER +S+T E + ++ DI+ +FH N G + G + +
Sbjct: 182 PDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQ---EI 238
Query: 509 LIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA 616
+I +AG VIGK G IK+L+E+ G ++ + + +
Sbjct: 239 MIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGS 274
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +2
Query: 437 MPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA 616
MP +G G ++ I + G VIG+ G +K + ++TGA ++I
Sbjct: 406 MPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLP 465
Query: 617 P 619
P
Sbjct: 466 P 466
>U69126-1|AAC50892.1| 652|Homo sapiens FUSE binding protein 2
protein.
Length = 652
Score = 37.1 bits (82), Expect = 0.050
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Frame = +2
Query: 356 PDCPG-PERVLSITA--EDDETLVEIIKDIMPC-----LAEFH-NQGGSRMGDQELDVRM 508
PD G PER +S+T E + ++ DI+ +FH N G + G + +
Sbjct: 126 PDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQ---EI 182
Query: 509 LIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA 616
+I +AG VIGK G IK+L+E+ G ++ + + +
Sbjct: 183 MIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGS 218
>BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein.
Length = 710
Score = 37.1 bits (82), Expect = 0.050
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Frame = +2
Query: 356 PDCPG-PERVLSITA--EDDETLVEIIKDIMPC-----LAEFH-NQGGSRMGDQELDVRM 508
PD G PER +S+T E + ++ DI+ +FH N G + G + +
Sbjct: 182 PDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQ---EI 238
Query: 509 LIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA 616
+I +AG VIGK G IK+L+E+ G ++ + + +
Sbjct: 239 MIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGS 274
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +2
Query: 437 MPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA 616
MP +G G ++ I + G VIG+ G +K + ++TGA ++I
Sbjct: 406 MPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLP 465
Query: 617 P 619
P
Sbjct: 466 P 466
>AB209366-1|BAD92603.1| 493|Homo sapiens far upstream
element-binding protein variant protein.
Length = 493
Score = 37.1 bits (82), Expect = 0.050
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = +2
Query: 455 FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 622
FH+ G QE+ +I S+AG VIGK G IK+L+E+ G ++ + PQ
Sbjct: 27 FHHGDGPGNAVQEI----MIPASKAGLVIGKGGETIKQLQERAGVKM-VMIQDGPQ 77
Score = 33.9 bits (74), Expect = 0.47
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 497 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 619
+ ++ + G +IGK G IK + +++GAR+++ N P
Sbjct: 228 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPP 268
>AB209662-1|BAD92899.1| 384|Homo sapiens KH-type splicing
regulatory protein (FUSE binding protein 2) variant
protein.
Length = 384
Score = 35.5 bits (78), Expect = 0.15
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 452 EFH-NQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA 616
+FH N G + G + ++I +AG VIGK G IK+L+E+ G ++ + + +
Sbjct: 40 QFHDNANGGQNGTVQ---EIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGS 92
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +2
Query: 437 MPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSA 616
MP +G G ++ I + G VIG+ G +K + ++TGA ++I
Sbjct: 224 MPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLP 283
Query: 617 P 619
P
Sbjct: 284 P 284
>U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like
RNA-binding protein protein.
Length = 498
Score = 34.7 bits (76), Expect = 0.27
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 473 SRMGDQ-ELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
S G++ E +++LI AG +IGK G I +L+++TGA +K+
Sbjct: 31 SNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 74
Score = 31.5 bits (68), Expect = 2.5
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 500 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
V + + ++ G ++GK G + E +E TGAR++I
Sbjct: 415 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 448
>AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nova-2
protein.
Length = 492
Score = 34.7 bits (76), Expect = 0.27
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 473 SRMGDQ-ELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
S G++ E +++LI AG +IGK G I +L+++TGA +K+
Sbjct: 25 SNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 68
Score = 31.5 bits (68), Expect = 2.5
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 500 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
V + + ++ G ++GK G + E +E TGAR++I
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 442
>U04840-1|AAA16022.1| 510|Homo sapiens onconeural ventral antigen-1
protein.
Length = 510
Score = 34.3 bits (75), Expect = 0.36
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +2
Query: 485 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
D + +++LI AG +IGK G I +L+++TGA +K+
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 85
Score = 31.5 bits (68), Expect = 2.5
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 500 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
V + + ++ G ++GK G + E +E TGAR++I
Sbjct: 427 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 460
>BC075039-1|AAH75039.1| 507|Homo sapiens neuro-oncological ventral
antigen 1 protein.
Length = 507
Score = 34.3 bits (75), Expect = 0.36
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +2
Query: 485 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
D + +++LI AG +IGK G I +L+++TGA +K+
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 85
Score = 31.5 bits (68), Expect = 2.5
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 500 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
V + + ++ G ++GK G + E +E TGAR++I
Sbjct: 424 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 457
>BC075038-1|AAH75038.1| 507|Homo sapiens neuro-oncological ventral
antigen 1 protein.
Length = 507
Score = 34.3 bits (75), Expect = 0.36
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +2
Query: 485 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
D + +++LI AG +IGK G I +L+++TGA +K+
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 85
Score = 31.5 bits (68), Expect = 2.5
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 500 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
V + + ++ G ++GK G + E +E TGAR++I
Sbjct: 424 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 457
>BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth factor
2 mRNA binding protein 2 protein.
Length = 598
Score = 34.3 bits (75), Expect = 0.36
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +2
Query: 488 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFS 607
+E+ +++L H G +IGK G +K++ +TG ++ I S
Sbjct: 272 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS 311
>AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding
protein 2 protein.
Length = 598
Score = 34.3 bits (75), Expect = 0.36
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +2
Query: 488 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFS 607
+E+ +++L H G +IGK G +K++ +TG ++ I S
Sbjct: 272 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS 311
>AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinoma
autoantigen protein.
Length = 556
Score = 34.3 bits (75), Expect = 0.36
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +2
Query: 488 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFS 607
+E+ +++L H G +IGK G +K++ +TG ++ I S
Sbjct: 273 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS 312
>AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nova-2
[AA 29-492] protein.
Length = 464
Score = 33.9 bits (74), Expect = 0.47
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 491 ELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
E +++LI AG +IGK G I +L+++TGA +K+
Sbjct: 4 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 40
Score = 31.5 bits (68), Expect = 2.5
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 500 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
V + + ++ G ++GK G + E +E TGAR++I
Sbjct: 381 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 414
>M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein
binding protein protein.
Length = 1268
Score = 32.3 bits (70), Expect = 1.4
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDV 502
++ QYK S+ +P P E+ I E D V+ K + LA SRM + E
Sbjct: 461 IKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRM-ENERTK 510
Query: 503 RMLIHQSRAGCVIGKAGSKIKELREK 580
++I Q +IG+ G +I+E+R+K
Sbjct: 511 DLIIEQRFHRTIIGQKGERIREIRDK 536
>BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein.
Length = 898
Score = 32.3 bits (70), Expect = 1.4
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDV 502
++ QYK S+ +P P E+ I E D V+ K + LA SRM + E
Sbjct: 91 IKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRM-ENERTK 140
Query: 503 RMLIHQSRAGCVIGKAGSKIKELREK 580
++I Q +IG+ G +I+E+R+K
Sbjct: 141 DLIIEQRFHRTIIGQKGERIREIRDK 166
>BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotein
binding protein (vigilin) protein.
Length = 1268
Score = 32.3 bits (70), Expect = 1.4
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDV 502
++ QYK S+ +P P E+ I E D V+ K + LA SRM + E
Sbjct: 461 IKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRM-ENERTK 510
Query: 503 RMLIHQSRAGCVIGKAGSKIKELREK 580
++I Q +IG+ G +I+E+R+K
Sbjct: 511 DLIIEQRFHRTIIGQKGERIREIRDK 536
>AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein.
Length = 1268
Score = 32.3 bits (70), Expect = 1.4
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDV 502
++ QYK S+ +P P E+ I E D V+ K + LA SRM + E
Sbjct: 461 IKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRM-ENERTK 510
Query: 503 RMLIHQSRAGCVIGKAGSKIKELREK 580
++I Q +IG+ G +I+E+R+K
Sbjct: 511 DLIIEQRFHRTIIGQKGERIREIRDK 536
>BC066938-1|AAH66938.1| 648|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 43 protein.
Length = 648
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 482 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
G +EL + + G VIG+ GSKIK ++ T ++I
Sbjct: 64 GHEELPLCFALKSHFVGAVIGRGGSKIKNIQSTTNTTIQI 103
>AJ278110-1|CAB92442.1| 648|Homo sapiens DEAD-box protein protein.
Length = 648
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 482 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 601
G +EL + + G VIG+ GSKIK ++ T ++I
Sbjct: 64 GHEELPLCFALKSHFVGAVIGRGGSKIKNIQSTTNTTIQI 103
>AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens
cDNA FLJ45936 fis, clone PLACE7004103, highly similar
to Vigilin. ).
Length = 847
Score = 31.1 bits (67), Expect = 3.3
Identities = 26/86 (30%), Positives = 43/86 (50%)
Frame = +2
Query: 323 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDV 502
++ QYK S+ +P P E+ I E D V+ K + LA SR+ + E
Sbjct: 144 IKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRL-ENERTK 193
Query: 503 RMLIHQSRAGCVIGKAGSKIKELREK 580
++I Q +IG+ G +I+E+R+K
Sbjct: 194 DLIIEQRFHRTIIGQKGERIREIRDK 219
>AK001746-1|BAA91878.1| 440|Homo sapiens protein ( Homo sapiens
cDNA FLJ10884 fis, clone NT2RP4001950. ).
Length = 440
Score = 31.1 bits (67), Expect = 3.3
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +2
Query: 395 AEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELR 574
A ++ E++KD++P E NQGG + G QE + LI I G L+
Sbjct: 189 ASQKSSMKELLKDVLPQKEEI-NQGGRKYGIQEKRDKTLIDSKHRAGEITSDGLSFLFLK 247
Query: 575 EKTGARLKIFSNSAPQ 622
E A+ + N Q
Sbjct: 248 EVKVAKPEEMKNLETQ 263
>AL162739-7|CAI19299.1| 865|Homo sapiens novel protein (FLJ10884)
protein.
Length = 865
Score = 30.7 bits (66), Expect = 4.4
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +2
Query: 395 AEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELR 574
A ++ E++KD++P E NQGG + G QE + LI I G L+
Sbjct: 303 ASQKSSVKELLKDVLPQKEEI-NQGGRKYGIQEKRDKTLIDSKHRAGEITSDGLSFLFLK 361
Query: 575 EKTGARLKIFSNSAPQ 622
E A+ + N Q
Sbjct: 362 EVKVAKPEEMKNLETQ 377
>AK001973-1|BAA92011.1| 865|Homo sapiens protein ( Homo sapiens
cDNA FLJ11111 fis, clone PLACE1005923. ).
Length = 865
Score = 30.7 bits (66), Expect = 4.4
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +2
Query: 395 AEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELR 574
A ++ E++KD++P E NQGG + G QE + LI I G L+
Sbjct: 303 ASQKSSVKELLKDVLPQKEEI-NQGGRKYGIQEKRDKTLIDSKHRAGEITSDGLSFLFLK 361
Query: 575 EKTGARLKIFSNSAPQ 622
E A+ + N Q
Sbjct: 362 EVKVAKPEEMKNLETQ 377
>BC111559-1|AAI11560.1| 865|Homo sapiens LINE-1 type transposase
domain containing 1 protein.
Length = 865
Score = 30.3 bits (65), Expect = 5.8
Identities = 22/76 (28%), Positives = 32/76 (42%)
Frame = +2
Query: 395 AEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELR 574
A ++ E++KD++P E NQGG G QE + LI I G L+
Sbjct: 303 ASQKSSMKELLKDVLPQKEEI-NQGGRNYGIQEKRDKTLIDSKHRAGEITSDGLSFLFLK 361
Query: 575 EKTGARLKIFSNSAPQ 622
E A+ + N Q
Sbjct: 362 EVKVAKPEEMKNLETQ 377
>AB211065-1|BAD95492.1| 865|Homo sapiens ES cell associated
transcript 11 protein.
Length = 865
Score = 30.3 bits (65), Expect = 5.8
Identities = 22/76 (28%), Positives = 32/76 (42%)
Frame = +2
Query: 395 AEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELR 574
A ++ E++KD++P E NQGG G QE + LI I G L+
Sbjct: 303 ASQKSSMKELLKDVLPQKEEI-NQGGRNYGIQEKRDKTLIDSKHRAGEITSDGLSFLFLK 361
Query: 575 EKTGARLKIFSNSAPQ 622
E A+ + N Q
Sbjct: 362 EVKVAKPEEMKNLETQ 377
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,642,366
Number of Sequences: 237096
Number of extensions: 1870655
Number of successful extensions: 7607
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 7429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7584
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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