Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14o05
         (666 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_1071 + 30133696-30133874,30134294-30135200,30135224-301353...    30   1.9  
04_04_1441 - 33621423-33622118,33622251-33622315,33623140-336232...    29   4.4  
09_03_0147 + 12763526-12763815,12763938-12764067,12764185-127644...    28   5.8  
01_05_0506 + 22792653-22792680,22794538-22794610,22794617-227947...    28   7.7  

>03_05_1071 +
           30133696-30133874,30134294-30135200,30135224-30135358,
           30135545-30136553,30136699-30136703
          Length = 744

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +1

Query: 313 IDIVVGGHSHTLLFNGEPPENSGFVPRGPYPVVVDT-DGGPVLIVQAAAHTQYLGEIKLF 489
           +D+V+G H + L F  E PEN    P+ P P+ ++  D G +   +     Q LG+    
Sbjct: 577 VDVVIGDHLYELSFRVE-PENG---PKEPVPMEMENLDDGDLEKKKEGNVNQDLGKGAGL 632

Query: 490 FDDSGN 507
           FD   N
Sbjct: 633 FDSGNN 638


>04_04_1441 -
           33621423-33622118,33622251-33622315,33623140-33623227,
           33623957-33625570
          Length = 820

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +1

Query: 313 IDIVVGGHSHTLLFNGEPPENSGFVPRGPYPVVVDT-DGGPVLIVQAAAHTQYLGEIKLF 489
           +D+V+G H + L F  E PEN    P  P P+ ++  D G +   +     Q LG+    
Sbjct: 676 VDVVIGDHLYELSFRVE-PENR---PEEPVPMEMENLDDGDLEKKKEGNMNQDLGKGAGL 731

Query: 490 FDDSGN 507
           F DSGN
Sbjct: 732 F-DSGN 736


>09_03_0147 +
           12763526-12763815,12763938-12764067,12764185-12764435,
           12764546-12764750,12764878-12764918,12765006-12765131,
           12765429-12765502,12765671-12765891,12766251-12766345,
           12766463-12766679,12766781-12766906,12766988-12767086,
           12767171-12767380,12767496-12767606
          Length = 731

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/52 (23%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -1

Query: 480 DLAKILCVRGS--LDDQYRSAVSIHNDRIGTTRDKPAVLWRLTIKEQGVTMT 331
           ++ ++L  RG   L D+Y+  ++   D    + + P   W++  +E G+T +
Sbjct: 104 NVGRVLEARGREFLGDKYKDPIASFTDFHKFSIENPEAYWKMVFEEMGITFS 155


>01_05_0506 +
           22792653-22792680,22794538-22794610,22794617-22794707,
           22794727-22795077
          Length = 180

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = -1

Query: 465 LCVRGSLDDQYRSAVSIHNDRIGTTRDKPAVLWRLTIKEQGVTMTSYNDVDV 310
           LC  G+ D +     ++H DR     D PA     T+ E+ ++ T+    DV
Sbjct: 33  LCCAGAGDTELTHGEAVHQDRHPDDADHPASEPITTVNEEKLSTTTVAAADV 84


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,749,303
Number of Sequences: 37544
Number of extensions: 353762
Number of successful extensions: 878
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)