Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14o02
         (674 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0931 - 26052135-26052176,26052273-26052377,26052489-260525...    32   0.36 
07_03_1170 - 24505743-24505875,24506087-24506475,24507133-245073...    28   5.9  
06_01_0324 - 2357432-2357724,2358042-2358105,2358321-2358404,235...    28   5.9  
01_01_0090 + 706340-707296,707370-707513,707596-707682,707771-70...    28   5.9  
01_01_0088 + 688792-691441,691629-693013                               28   5.9  
11_08_0022 + 27733247-27733935,27735722-27735981,27736213-277364...    28   7.8  

>06_03_0931 -
           26052135-26052176,26052273-26052377,26052489-26052584,
           26052686-26052757,26052879-26052974,26053054-26053155,
           26053258-26053347,26053452-26053535,26053623-26053697,
           26053847-26053930,26054012-26054242
          Length = 358

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -3

Query: 240 QDHVFCRELAPTSRQYYSTLFYCNFQRII 154
           Q HV  R LAPT    ++TLF C F  +I
Sbjct: 222 QQHVLKRPLAPTKSVVFATLFMCCFSSVI 250


>07_03_1170 -
           24505743-24505875,24506087-24506475,24507133-24507369,
           24507967-24508136,24510196-24510316
          Length = 349

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 9/40 (22%), Positives = 21/40 (52%)
 Frame = -3

Query: 258 YVSEVYQDHVFCRELAPTSRQYYSTLFYCNFQRIIKHILT 139
           ++ ++ + H+FC E    + ++   + Y N Q  + H +T
Sbjct: 256 HIEDICEAHIFCAEQPSIAGRFLCAVGYPNMQDYVDHFVT 295


>06_01_0324 -
           2357432-2357724,2358042-2358105,2358321-2358404,
           2358638-2358715,2359298-2359360,2359459-2359561,
           2359675-2359800,2360212-2360258,2361284-2361388,
           2361483-2361605,2361759-2361854,2362052-2362141,
           2362759-2362815,2362899-2363028,2363613-2363708,
           2363815-2363875,2364391-2364490
          Length = 571

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 154 NYALKVTIKQCRIILSARRGQLPAKYVVLVDLRNVLVHGVLK 279
           N+AL  T+ +CR+ +    G  P    VL+ L N L    LK
Sbjct: 166 NHALGATLVKCRMYVGNVHGDEPVGREVLIKLANWLCDNYLK 207


>01_01_0090 + 706340-707296,707370-707513,707596-707682,707771-708105,
            708462-708702,708783-708857,708932-709017,709451-709523,
            709637-709961,710092-711750,711938-713322
          Length = 1788

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 148  HSHFLSMNLKFIVFFAIF*CCNHYYDGKDT*ISSNINNV 32
            HS  L  NL  +    +  CCN   DG +  I+SN+N +
Sbjct: 1588 HSMALLSNLTALTSLQLIDCCNVTMDGFNPLITSNLNKL 1626


>01_01_0088 + 688792-691441,691629-693013
          Length = 1344

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 148  HSHFLSMNLKFIVFFAIF*CCNHYYDGKDT*ISSNINNV 32
            HS  L  NL  +    +  CCN   DG +  I+SN+N +
Sbjct: 1144 HSMALLSNLTALTSLQLIDCCNVTMDGFNPLITSNLNKL 1182


>11_08_0022 +
           27733247-27733935,27735722-27735981,27736213-27736404,
           27737695-27738686
          Length = 710

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 385 HAPLLYACLNSERHVSEQNSFLPFSV 308
           + P++Y C N+  HV    SFL  ++
Sbjct: 105 YTPVVYQCYNTSDHVDSSTSFLQLNI 130


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,980,181
Number of Sequences: 37544
Number of extensions: 300483
Number of successful extensions: 758
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)