Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14n24
(459 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 124 2e-29
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 70 9e-13
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 47 8e-06
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 41 4e-04
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 41 4e-04
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 41 4e-04
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 41 4e-04
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 40 7e-04
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 40 7e-04
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 39 0.002
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 39 0.002
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 35 0.033
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 35 0.033
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 35 0.033
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 33 0.100
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 33 0.100
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 31 0.40
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 0.40
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 0.40
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 31 0.53
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 31 0.53
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 31 0.53
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 31 0.53
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 31 0.53
Z81069-5|CAB02995.1| 504|Caenorhabditis elegans Hypothetical pr... 30 0.93
U56964-7|AAB54034.1| 382|Caenorhabditis elegans Hypothetical pr... 30 0.93
U49956-4|AAK77620.1| 1117|Caenorhabditis elegans Variable abnorm... 29 1.6
U49956-3|AAK77621.1| 1122|Caenorhabditis elegans Variable abnorm... 29 1.6
AF040269-1|AAC38970.1| 1122|Caenorhabditis elegans Eph receptor ... 29 1.6
U80843-11|AAB37970.1| 296|Caenorhabditis elegans Hypothetical p... 28 2.8
Z81039-3|CAB02775.1| 325|Caenorhabditis elegans Hypothetical pr... 27 5.0
L11247-1|AAA28010.2| 484|Caenorhabditis elegans Hypothetical pr... 27 5.0
AF025463-2|AAB71006.1| 387|Caenorhabditis elegans Serpentine re... 27 5.0
Z81038-3|CAB02759.1| 316|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 124 bits (300), Expect = 2e-29
Identities = 57/70 (81%), Positives = 63/70 (90%)
Frame = +2
Query: 245 PLENIRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGIT 424
P+E IRNIGISAHIDSGKTT+TERIL+Y GRID MHEV+GKD+VGA MD M+LERQRGIT
Sbjct: 40 PIERIRNIGISAHIDSGKTTVTERILYYAGRIDSMHEVRGKDDVGATMDFMDLERQRGIT 99
Query: 425 IQSAATYXIW 454
IQSAATY W
Sbjct: 100 IQSAATYVDW 109
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 69.7 bits (163), Expect = 9e-13
Identities = 33/67 (49%), Positives = 45/67 (67%)
Frame = +2
Query: 257 IRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQSA 436
+RNIG+ AH+D+GKTT+TER+L+ G I H D V D +++ER+RGIT+QSA
Sbjct: 25 LRNIGVIAHVDAGKTTVTERLLYLAGAI---HVAGHVDKGNTVTDFLDIERERGITVQSA 81
Query: 437 ATYXIWK 457
A WK
Sbjct: 82 AVNLDWK 88
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 46.8 bits (106), Expect = 8e-06
Identities = 25/70 (35%), Positives = 42/70 (60%)
Frame = +2
Query: 224 VKYAEHXPLENIRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMEL 403
V +E P + IRN GI AH+D GK+TL +R+L G + + ++D +++
Sbjct: 32 VNLSEFTP-DKIRNFGIVAHVDHGKSTLADRLLEMCGAVPPGQK--------QMLDKLQV 82
Query: 404 ERQRGITIQS 433
ER+RGIT+++
Sbjct: 83 ERERGITVKA 92
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 41.1 bits (92), Expect = 4e-04
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Frame = +2
Query: 263 NIGISAHIDSGKTTLTERILFYTGRID---------QMHEV-KGKDNVGAVMDSMELERQ 412
NI + H+DSGK+T T +++ G ID + E+ KG V+D ++ ER+
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 413 RGITIQSAATYXIWK 457
RGITI A +WK
Sbjct: 69 RGITIDIA----LWK 79
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 41.1 bits (92), Expect = 4e-04
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Frame = +2
Query: 263 NIGISAHIDSGKTTLTERILFYTGRID---------QMHEV-KGKDNVGAVMDSMELERQ 412
NI + H+DSGK+T T +++ G ID + E+ KG V+D ++ ER+
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 413 RGITIQSAATYXIWK 457
RGITI A +WK
Sbjct: 69 RGITIDIA----LWK 79
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 41.1 bits (92), Expect = 4e-04
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Frame = +2
Query: 263 NIGISAHIDSGKTTLTERILFYTGRID---------QMHEV-KGKDNVGAVMDSMELERQ 412
NI + H+DSGK+T T +++ G ID + E+ KG V+D ++ ER+
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 413 RGITIQSAATYXIWK 457
RGITI A +WK
Sbjct: 69 RGITIDIA----LWK 79
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 41.1 bits (92), Expect = 4e-04
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Frame = +2
Query: 263 NIGISAHIDSGKTTLTERILFYTGRID---------QMHEV-KGKDNVGAVMDSMELERQ 412
NI + H+DSGK+T T +++ G ID + E+ KG V+D ++ ER+
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 413 RGITIQSAATYXIWK 457
RGITI A +WK
Sbjct: 69 RGITIDIA----LWK 79
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 40.3 bits (90), Expect = 7e-04
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = +2
Query: 245 PLENIRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGIT 424
P E+IRN+ + AH+D GKT+ + ++ I + GK MDS E E+ RGIT
Sbjct: 16 PAEHIRNVCLVAHVDHGKTSFADSLVSANAVISS--RMAGKLR---YMDSREDEQTRGIT 70
Query: 425 IQSA 436
++S+
Sbjct: 71 MKSS 74
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 40.3 bits (90), Expect = 7e-04
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = +2
Query: 245 PLENIRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGIT 424
P E+IRN+ + AH+D GKT+ + ++ I + GK MDS E E+ RGIT
Sbjct: 16 PAEHIRNVCLVAHVDHGKTSFADSLVSANAVISS--RMAGKLR---YMDSREDEQTRGIT 70
Query: 425 IQSA 436
++S+
Sbjct: 71 MKSS 74
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = +2
Query: 254 NIRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQS 433
NIRN+ + AH+D GK+TLT+ ++ G I K D+ + E++R ITI+S
Sbjct: 18 NIRNMSVIAHVDHGKSTLTDSLVSKAGII-----AGSKAGETRFTDTRKDEQERCITIKS 72
Query: 434 AA 439
A
Sbjct: 73 TA 74
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = +2
Query: 254 NIRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQS 433
NIRN+ + AH+D GK+TLT+ ++ G I K D+ + E++R ITI+S
Sbjct: 18 NIRNMSVIAHVDHGKSTLTDSLVSKAGII-----AGSKAGETRFTDTRKDEQERCITIKS 72
Query: 434 AA 439
A
Sbjct: 73 TA 74
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 34.7 bits (76), Expect = 0.033
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 263 NIGISAHIDSGKTTLTERI 319
N+GI H+DSGKTTLT RI
Sbjct: 15 NLGILGHVDSGKTTLTRRI 33
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 34.7 bits (76), Expect = 0.033
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 263 NIGISAHIDSGKTTLTERI 319
N+GI H+DSGKTTLT RI
Sbjct: 15 NLGILGHVDSGKTTLTRRI 33
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 34.7 bits (76), Expect = 0.033
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 10/71 (14%)
Frame = +2
Query: 263 NIGISAHIDSGKTTLTERILFYTGRID----QMHEVKGKDN------VGAVMDSMELERQ 412
N+ H+D+GK+T+ +++F TG +D + +E + K+ + MD+ + ER+
Sbjct: 111 NMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEERE 170
Query: 413 RGITIQSAATY 445
+G T++ Y
Sbjct: 171 KGKTVEVGRAY 181
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 33.1 bits (72), Expect = 0.100
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +2
Query: 263 NIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQSA 436
N+G HID GKTTLT I + +K + +D + E++RGITI A
Sbjct: 47 NVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDE-----IDKGKEEKKRGITINVA 99
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 33.1 bits (72), Expect = 0.100
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +2
Query: 263 NIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQSA 436
N+G HID GKTTLT I + +K + +D + E++RGITI A
Sbjct: 47 NVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDE-----IDKGKEEKKRGITINVA 99
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 31.1 bits (67), Expect = 0.40
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 263 NIGISAHIDSGKTTLTERILFYTGRIDQ 346
NI + H+DSGK+T T +++ G ID+
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDK 36
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 31.1 bits (67), Expect = 0.40
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +2
Query: 257 IRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQS 433
+RN+ I+ H+ GKTT + ++ T + +D D + +E+QRG +I+S
Sbjct: 132 MRNVAIAGHLHHGKTTFLDCLMEQT----HPEFYRAEDADARFTDILFIEKQRGCSIKS 186
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 31.1 bits (67), Expect = 0.40
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +2
Query: 257 IRNIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQS 433
+RN+ I+ H+ GKTT + ++ T + +D D + +E+QRG +I+S
Sbjct: 7 MRNVAIAGHLHHGKTTFLDCLMEQT----HPEFYRAEDADARFTDILFIEKQRGCSIKS 61
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 30.7 bits (66), Expect = 0.53
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 10/74 (13%)
Frame = +2
Query: 251 ENIRNIGISAHIDSGKTTLTERILFYTGRIDQ------MHEV--KGKDNVGA--VMDSME 400
+++ N+ + H+D+GK+TL +L +D HE GK + V+D E
Sbjct: 168 KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETE 227
Query: 401 LERQRGITIQSAAT 442
ER+RG+T+ T
Sbjct: 228 EERERGVTMDIGRT 241
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 30.7 bits (66), Expect = 0.53
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 10/74 (13%)
Frame = +2
Query: 251 ENIRNIGISAHIDSGKTTLTERILFYTGRIDQ------MHEV--KGKDNVGA--VMDSME 400
+++ N+ + H+D+GK+TL +L +D HE GK + V+D E
Sbjct: 186 KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETE 245
Query: 401 LERQRGITIQSAAT 442
ER+RG+T+ T
Sbjct: 246 EERERGVTMDIGRT 259
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 30.7 bits (66), Expect = 0.53
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +2
Query: 263 NIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQS 433
N+G H+D GKTTLT I K +D +D+ E+ RGITI +
Sbjct: 51 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED-----IDNAPEEKARGITINA 102
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 30.7 bits (66), Expect = 0.53
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +2
Query: 263 NIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQS 433
N+G H+D GKTTLT I K +D +D+ E+ RGITI +
Sbjct: 52 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED-----IDNAPEEKARGITINA 103
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 30.7 bits (66), Expect = 0.53
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +2
Query: 263 NIGISAHIDSGKTTLTERILFYTGRIDQMHEVKGKDNVGAVMDSMELERQRGITIQS 433
N+G H+D GKTTLT I K +D +D+ E+ RGITI +
Sbjct: 52 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED-----IDNAPEEKARGITINA 103
>Z81069-5|CAB02995.1| 504|Caenorhabditis elegans Hypothetical
protein F25H9.5 protein.
Length = 504
Score = 29.9 bits (64), Expect = 0.93
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +2
Query: 155 INALKNTKKSSVFQIELQKYSSHVKYAEHXPLENIRNIGISAHIDSGKTTLTERILFYTG 334
+ A N ++ ++ K+S + E L N GI +I+SGKT T+++LF+
Sbjct: 54 LRATHNQSTETLGSPKVVKFSIYFSRGER--LSNEEENGIELNIESGKTADTKKLLFHLA 111
Query: 335 R 337
+
Sbjct: 112 K 112
>U56964-7|AAB54034.1| 382|Caenorhabditis elegans Hypothetical
protein F52E4.8 protein.
Length = 382
Score = 29.9 bits (64), Expect = 0.93
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +3
Query: 165 LKIQKNRVYFKLSYRNIH---HMSNMQNTNHWKIFEILV 272
+KI+ N++ F + NI+ H T HW++F +LV
Sbjct: 335 VKIKPNKIIFASLHCNINSGVHRETRTLTGHWRVFRVLV 373
>U49956-4|AAK77620.1| 1117|Caenorhabditis elegans Variable abnormal
morphology protein1, isoform a protein.
Length = 1117
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 168 KIQKNRVYFKLSYRNIHHMSNMQNTNHWKIFEILVYQL 281
+I N VY +L NIH +S++ NT+H ++L Y L
Sbjct: 1036 QIGLNHVYGQLVSNNIHSVSDLANTSH---LDLLAYGL 1070
>U49956-3|AAK77621.1| 1122|Caenorhabditis elegans Variable abnormal
morphology protein1, isoform b protein.
Length = 1122
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 168 KIQKNRVYFKLSYRNIHHMSNMQNTNHWKIFEILVYQL 281
+I N VY +L NIH +S++ NT+H ++L Y L
Sbjct: 1041 QIGLNHVYGQLVSNNIHSVSDLANTSH---LDLLAYGL 1075
>AF040269-1|AAC38970.1| 1122|Caenorhabditis elegans Eph receptor
tyrosine kinase protein.
Length = 1122
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 168 KIQKNRVYFKLSYRNIHHMSNMQNTNHWKIFEILVYQL 281
+I N VY +L NIH +S++ NT+H ++L Y L
Sbjct: 1041 QIGLNHVYGQLVSNNIHSVSDLANTSH---LDLLAYGL 1075
>U80843-11|AAB37970.1| 296|Caenorhabditis elegans Hypothetical
protein C32B5.15 protein.
Length = 296
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +3
Query: 171 IQKNRVYF---KLSYRNIHHMSNMQNTNHWKIFEIL 269
++ N ++F +S + IHH SN++N NH + E++
Sbjct: 154 LKSNIIFFWKQGMSQQKIHHFSNIRNVNHIILSEMV 189
>Z81039-3|CAB02775.1| 325|Caenorhabditis elegans Hypothetical
protein C25D7.4 protein.
Length = 325
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 340 YSSSIEQ-NTFSECCLSRVYVS*YTNISNIFQWXVF 236
Y + +EQ E C S V+ YT+I N+F + F
Sbjct: 204 YLAQLEQWKNAKELCASAVFAGFYTSIENLFNFRKF 239
>L11247-1|AAA28010.2| 484|Caenorhabditis elegans Hypothetical
protein F09G8.5 protein.
Length = 484
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 302 LSFQS-LCELIYQYFEYFPMVXVLHI*HVMNISVTQFEIHSIFL 174
++FQS L LI F +F ++ L H + S F+ HS+FL
Sbjct: 17 IAFQSVLLPLILHLFSFF-LLSFLSFLHFRSFSANNFKHHSLFL 59
>AF025463-2|AAB71006.1| 387|Caenorhabditis elegans Serpentine
receptor, class t protein54 protein.
Length = 387
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 309 LNVFCSILDE*TKCTRLKVKTMLVL 383
LN+FCSI TKCT + ML L
Sbjct: 56 LNIFCSIAIIYTKCTHPSTQLMLFL 80
>Z81038-3|CAB02759.1| 316|Caenorhabditis elegans Hypothetical
protein C25A1.5 protein.
Length = 316
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 274 YTNISNIFQWXVFCIF 227
Y SN FQW VFC F
Sbjct: 234 YLIYSNTFQWPVFCAF 249
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,341,864
Number of Sequences: 27780
Number of extensions: 212245
Number of successful extensions: 550
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 540
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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